prot_E_fasciculatus_S2_contig790.16066.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig790.16066.1
Unique Nameprot_E_fasciculatus_S2_contig790.16066.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length197
Homology
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 1.620e-134
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK-ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 329 bits (843), Expect = 4.870e-113
Identity = 167/192 (86.98%), Postives = 177/192 (92.19%), Query Frame = 0
Query:    5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV  EEA  YAE+NG+IHMETSAKSA NVKSIFVEIA++LPKA  QPEREAFPIM PR ++K+G C
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKD-SFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 320 bits (821), Expect = 1.130e-109
Identity = 156/196 (79.59%), Postives = 179/196 (91.33%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNK  SFNGAKSWVKELQRRGDPNVIIALAGNKADL+++R+V+SEEA+ Y+E+NG++HMETSAK+A +VK +F EIA+KLPK   QPER+AFPI+ P+  +   CC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNK-ESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVCC 195          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 318 bits (816), Expect = 6.330e-109
Identity = 163/196 (83.16%), Postives = 173/196 (88.27%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SFNGAKSWVKELQRRGDPNV+IALAGNK DLE RRQV  EEA  YA +NG+IHMETSAKSA NV+ IF++IA+KLPK   Q ERE FPIM P+ E K GCC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKD-SFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDIAKKLPKNPPQVEREVFPIMPPKRESK-GCC 194          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 315 bits (807), Expect = 1.600e-107
Identity = 156/197 (79.19%), Postives = 178/197 (90.36%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQ-KSGCC 196
            M++ RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TNK  SFNGA+SWVKELQ+RGDPNV+IALAGNK+DLEH+R+V++EEA  YA +NG++HMETSAKSA NVKS+FVEIA+KLPK   +  REAFPI+ P+T Q +  CC
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNKD-SFNGARSWVKELQKRGDPNVVIALAGNKSDLEHKRKVETEEAEAYALENGILHMETSAKSATNVKSLFVEIARKLPKNPPETPREAFPIIPPKTSQSRRQCC 196          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 316 bits (809), Expect = 3.170e-107
Identity = 156/193 (80.83%), Postives = 174/193 (90.16%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGC 195
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN   SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YAE+NG++H+ETSAK+A NVK++FVEIA+KLPK   QPEREAFPI+ P+ E +S C
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPD-SFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRSCC 236          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A6U2XTP3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2XTP3_9STRA)

HSP 1 Score: 313 bits (803), Expect = 7.460e-107
Identity = 156/194 (80.41%), Postives = 176/194 (90.72%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            + R+ HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN   SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YA +NGL+H+ETSAK+A NVKS+FVEIA+KLPK   +PEREAFPI+ P+T++KS CC
Sbjct:    9 NSRIHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPD-SFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYATENGLLHLETSAKNANNVKSLFVEIAKKLPKQEPEPEREAFPIL-PQTQEKSNCC 200          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: B8BUG2_THAPS (Canine-like rab-type small G protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BUG2_THAPS)

HSP 1 Score: 312 bits (800), Expect = 1.670e-106
Identity = 156/194 (80.41%), Postives = 174/194 (89.69%), Query Frame = 0
Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN   SF GAKSWVKELQRRGD +V+IA+AGNKADLE RRQV  EEA  YAE+NG++HMETSAK+A NVK++FVEIA++LPK+T QP+REAFPIM P+ ++   CC
Sbjct:    2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNPD-SFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIM-PQKQESRNCC 193          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: A0A1E7EUF1_9STRA (Ras-related small GTPase Rab5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUF1_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.500e-106
Identity = 153/195 (78.46%), Postives = 176/195 (90.26%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGC 195
            MSS RV HFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ VQLD++TVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN   SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA+ YAE+NG++H+ETSAK+A NVK++FVE+A+KLPK   QPEREAFP+  P+ + ++ C
Sbjct:    1 MSSSRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPD-SFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVELAKKLPKNAPQPEREAFPLAAPQNDNRNCC 194          
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 309 bits (792), Expect = 3.070e-105
Identity = 159/197 (80.71%), Postives = 171/197 (86.80%), Query Frame = 0
Query:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 196
            M+S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK  SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEAR YAE+N ++HMETSAK+A NVK +FV IAQKLPK   QPER+AFPI      +K+GCC
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKD-SFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig790.16066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI1.620e-13498.98Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7I1_9STRA4.870e-11386.98Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
F0YJN1_AURAN1.130e-10979.59Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6V1MPB5_HETAK6.330e-10983.16Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
A0A7S2RYM3_9STRA1.600e-10779.19Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1ZIQ9_TRICV3.170e-10780.83Hypothetical protein n=3 Tax=Mediophyceae TaxID=58... [more]
A0A6U2XTP3_9STRA7.460e-10780.41Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8BUG2_THAPS1.670e-10680.41Canine-like rab-type small G protein n=2 Tax=Thala... [more]
A0A1E7EUF1_9STRA3.500e-10678.46Ras-related small GTPase Rab5 n=1 Tax=Fragilariops... [more]
T0Q598_SAPDV3.070e-10580.71Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 50..72
score: 50.66
coord: 32..48
score: 32.53
coord: 9..30
score: 50.96
coord: 148..170
score: 37.28
coord: 113..126
score: 51.08
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 14..196
e-value: 2.0E-5
score: 27.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..172
e-value: 7.1E-12
score: 32.4
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..173
e-value: 1.6E-84
score: 296.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..173
e-value: 2.2E-28
score: 110.3
NoneNo IPR availableGENE3D3.40.50.300coord: 6..196
e-value: 5.3E-62
score: 210.7
NoneNo IPR availablePANTHERPTHR24073:SF1090RAS SMALL GTP-BINDING FAMILY PROTEIN-RELATEDcoord: 7..178
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 7..178
NoneNo IPR availablePROSITEPS51419RABcoord: 3..196
score: 30.972
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 9..165
e-value: 4.1E-31
score: 105.9
IPR001806Small GTPasePFAMPF00071Rascoord: 10..170
e-value: 2.2E-58
score: 196.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig790contigE_fasciculatus_S2_contig790:12583..16621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig790.16066.1mRNA_E_fasciculatus_S2_contig790.16066.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig790 11412..17039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig790.16066.1 ID=prot_E_fasciculatus_S2_contig790.16066.1|Name=mRNA_E_fasciculatus_S2_contig790.16066.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=197bp
MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARSFNGA
KSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHME
TSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom