prot_E_fasciculatus_S2_contig79.16064.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig79.16064.1
Unique Nameprot_E_fasciculatus_S2_contig79.16064.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length375
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig79.16064.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 574 bits (1480), Expect = 3.160e-204
Identity = 332/376 (88.30%), Postives = 342/376 (90.96%), Query Frame = 0 
Query:    1 MTTVRAVGAKRPRGYVAAAEEPTLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNGARRQPASTSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQRAAVDGLAGAPASAPGSRYPAMAHGRPLPPHAPMLATGELSGETTCVDHTDYSDNGLPP-RVLSRDESGSSWWSLDDQGGAGAAVSGRLSGVPAPIPSSSWPQREHXXXXXXXXXXXXXXXNDFSNDGAGVEHYGQRTGLWGGLRPGSAAGTXXXXXXXXXESWDDESEEGQGRDEEEEVAALLLGLGKTTNEDFEGFSDDDEEPAPERPVRPGGVGMFREP-RHLPVSNASQELSV 374
            MTTVRAVGAKRPRGYVAAAE+PTLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNG RRQPA TSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQ AAV GLA APAS+  SRYPA+AH RPL PHA +L TGELSGETTCVD TD SDNGLPP RVLSRDESGSSWWSLDDQGGAGAAVS RLSGVPA IPSS WPQRE XXXXXXXXXXXXXXX       AGV++YGQRTGLWGGLR       XXXXXXXXXESWDD+SEEGQG++EEE VAALLLGLGKTTNEDFEGFSDDDE+PAPERPVRPGGVGMFREP RHLPVSNASQELSV
Sbjct:    1 MTTVRAVGAKRPRGYVAAAEKPTLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNGTRRQPAGTSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQHAAVGGLARAPASSASSRYPAVAHSRPLAPHASVLTTGELSGETTCVDQTDCSDNGLPPHRVLSRDESGSSWWSLDDQGGAGAAVSARLSGVPALIPSS-WPQREXXXXXXXXXXXXXXXXXXXV---AGVKNYGQRTGLWGGLRSXXXXXXXXXXXXXXXESWDDDSEEGQGQNEEE-VAALLLGLGKTTNEDFEGFSDDDEQPAPERPVRPGGVGMFREPPRHLPVSNASQELSV 371
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig79.16064.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.290e-5
Identity = 23/45 (51.11%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   46 GFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRS 90
            G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++
Sbjct:   21 GPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKA 65
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig79.16064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIX7_9PHAE3.160e-20488.30Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A6H5K1B7_9PHAE1.290e-551.11Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 46..89
e-value: 0.0022
score: 27.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 50..85
e-value: 5.1E-5
score: 23.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 51..80
score: 9.743
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 47..104
e-value: 1.1E-7
score: 33.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 48..85
NoneNo IPR availablePANTHERPTHR47338FAMILY NOT NAMEDcoord: 50..143
NoneNo IPR availablePANTHERPTHR47338:SF5coord: 50..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig79contigE_fasciculatus_S2_contig79:46457..49434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig79.16064.1mRNA_E_fasciculatus_S2_contig79.16064.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig79 45144..49742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig79.16064.1 ID=prot_E_fasciculatus_S2_contig79.16064.1|Name=mRNA_E_fasciculatus_S2_contig79.16064.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=375bp
MTTVRAVGAKRPRGYVAAAEEPTLPWAGRVPKPAMDADSFVDYGSGFLRK
SCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNGARR
QPASTSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQRAAVDGLAGAP
ASAPGSRYPAMAHGRPLPPHAPMLATGELSGETTCVDHTDYSDNGLPPRV
LSRDESGSSWWSLDDQGGAGAAVSGRLSGVPAPIPSSSWPQREHHQQHHH
QEQQHQGGNNDFSNDGAGVEHYGQRTGLWGGLRPGSAAGTGSGSGGSTGE
SWDDESEEGQGRDEEEEVAALLLGLGKTTNEDFEGFSDDDEEPAPERPVR
PGGVGMFREPRHLPVSNASQELSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd