prot_E_fasciculatus_S2_contig7872.16034.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7872.16034.1
Unique Nameprot_E_fasciculatus_S2_contig7872.16034.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length132
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7872.16034.1 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.770e-26
Identity = 75/105 (71.43%), Postives = 90/105 (85.71%), Query Frame = 0 
Query:    6 SSNQKSRRGVTASVRSDHREDXXXXXXXXXXXXXXXXXXXXXXANGPGSSDEIGDASGDGTDVVDEYALEDEYGFEDHDYCAWGDDNDLSYVPSPDNDGIADERQ 110
            SS++KS RGVT S R+  R     XXXXXXXXXX  XXXXX  ANGPGS+DE G+ASGDG+D++D+YALEDEYGF+DH+YCAWGD+NDLS+VPSPD+DG+ADERQ
Sbjct:  825 SSSRKSHRGVTTSGRNCQRX----XXXXXXXXXXMTXXXXXDGANGPGSTDERGEASGDGSDIIDQYALEDEYGFDDHNYCAWGDENDLSFVPSPDSDGVADERQ 925
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BLAST of mRNA_E_fasciculatus_S2_contig7872.16034.1 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.810e-26
Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0 
Query:    7 SNQKSRRGVTASVRSDHREDXXXXXXXXXXXXXXXXXXXXXXANGPGSSDEIGDASGDGTDVVDEYALEDEYGFEDHDYCAWGDDNDLSYVPSPDNDGIADERQ 110
            S +KS RGVTASVR+  R+ XXXXXX XXXXXXXXXXXXXX ANGP S+DE G+ASGD  DVVDEYALEDEYGF+DHDYCAWGD+NDLS+VPSPD DG+ADERQ
Sbjct: 1127 SRRKSHRGVTASVRNCQRK-XXXXXXVXXXXXXXXXXXXXXGANGPDSTDERGEASGDSDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQ 1229
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7872.16034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCH0_ECTSI1.770e-2671.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8H1_9PHAE1.810e-2679.81Structure-specific endonuclease subunit SLX4 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7872contigE_fasciculatus_S2_contig7872:1134..1529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7872.16034.1mRNA_E_fasciculatus_S2_contig7872.16034.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7872 1134..1529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7872.16034.1 ID=prot_E_fasciculatus_S2_contig7872.16034.1|Name=mRNA_E_fasciculatus_S2_contig7872.16034.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=132bp
ANDSYSSNQKSRRGVTASVRSDHREDEDEEEEEDDEFAMMDSGGGGGGAN
GPGSSDEIGDASGDGTDVVDEYALEDEYGFEDHDYCAWGDDNDLSYVPSP
DNDGIADERQQQPPPPPPSPSPPLSPTQRPPD
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