prot_E_fasciculatus_S2_contig787.16032.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig787.16032.1
Unique Nameprot_E_fasciculatus_S2_contig787.16032.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length306
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig787.16032.1 vs. uniprot
Match: D7FKT8_ECTSI (TLC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT8_ECTSI)

HSP 1 Score: 585 bits (1508), Expect = 9.810e-209
Identity = 296/305 (97.05%), Postives = 300/305 (98.36%), Query Frame = 0 
Query:    1 MSNNDVLSWKRGWIPSAIAASLLFLPLESVGLEVFEPGWARGIAAFVALEVVRVGAVGLLPYWWRDIARRTGPLTDRSREQFGGQLTSLLLSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFNLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIVGALFFGNEGKRRGGPTLTVNHPDTQK-SKD 304
            MSNNDVLSWKRGWIPSAIA SLLFLPLESVGLE FEPGW RGIAAFVALEVVRVGAVGLLPYWWR+IARRTGPLTDRSREQFGGQLTSLL+SSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVF+LMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLI+GALF GNEGKRRGGPTLTVNHPDTQK SKD
Sbjct:  127 MSNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEAFEPGWERGIAAFVALEVVRVGAVGLLPYWWREIARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALF-GNEGKRRGGPTLTVNHPDTQKKSKD 430
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BLAST of mRNA_E_fasciculatus_S2_contig787.16032.1 vs. uniprot
Match: A0A6H5K373_9PHAE (TLC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K373_9PHAE)

HSP 1 Score: 584 bits (1505), Expect = 5.770e-208
Identity = 294/306 (96.08%), Postives = 300/306 (98.04%), Query Frame = 0 
Query:    1 MSNNDVLSWKRGWIPSAIAASLLFLPLESVGLEVFEPGWARGIAAFVALEVVRVGAVGLLPYWWRDIARRTGPLTDRSREQFGGQLTSLLLSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFNLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIVGALFFGNEGKRRGGPTLTVNHPDTQK-SKDT 305
            MSNNDVLSWKRGWIPSAIA SLLFLPLESVGLEVFEPGW RGIAAFVALEVVRVGAV LLPYWWRD+ARRTGPLTDRSREQFGGQLTSLL+SSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVF+LMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFL LFLVTRI++YLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLI+GALF GNEGKRRGGPTLTVNHPDTQK SKDT
Sbjct:  147 MSNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEVFEPGWERGIAAFVALEVVRVGAVALLPYWWRDVARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLALFLVTRILMYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALF-GNEGKRRGGPTLTVNHPDTQKKSKDT 451
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BLAST of mRNA_E_fasciculatus_S2_contig787.16032.1 vs. uniprot
Match: A0A835ZB74_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB74_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.440e-36
Identity = 96/299 (32.11%), Postives = 157/299 (52.51%), Query Frame = 0 
Query:   12 GWIPSAIAASLLFLP--LESVGLEVFEPGWARGIAAFVALEVVRVGAVGLLPYWWRDIARRTGPLTDRS-REQFGGQLTSLLLSSYLTWSIIRWDWQLTNKLPFIQTVGE-DHTGVVFNLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDII------QLYAELI-------------------------MPMPLRSVFLGAVVVSYVVNLYWAWLIV 275
            GWIP A+  + L+     ++    ++   W+     + A E +R+ AV LLP WWR   RR G   +R+ RE FG Q  SL +S+Y    + +     + +LPF+ T  + D   ++ ++  ++ +Y++ DT HL+R+W ++ N  ML+HH +F+V+  +G    QLP H RIH ++FSAE+STPLLN RW++R +   H    ++   S +F +LFL +R+ LY  +I D++      QL   L+                          P   + +F  AV  SY++NLYW  +I+
Sbjct:   15 GWIPGALVLAGLYCTGVFDTEDKSLWHTAWST----YAACEALRMVAVWLLPLWWR---RRRGGAPERAIRESFGTQAMSLAVSTYTVAHLAQLRLYASWELPFLHTAADADCIALIHHMTVVLGTYVICDTSHLIRTWHLSSNPAMLLHHAIFSVVLGLGAANPQLPPHYRIHVVLFSAELSTPLLNLRWILRWVA--HYKGRLVAPLSMAFALLFLFSRVGLYGALIADLVKKQPHRQLDVRLLRAACCLHTSFCGSSAWPVKTRRKLSFPRAQQDIFCAAVFCSYLLNLYWLIIII 304
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig787.16032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKT8_ECTSI9.810e-20997.05TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K373_9PHAE5.770e-20896.08TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZB74_9STRA2.440e-3632.11TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 77..283
e-value: 0.0017
score: 21.3
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 90..275
e-value: 2.3E-17
score: 63.4
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 77..283
score: 16.174
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 123..278
NoneNo IPR availablePANTHERPTHR13439:SF0TOPOISOMERASE I DAMAGE AFFECTED PROTEIN 4coord: 123..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..254
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..154
NoneNo IPR availableTMHMMTMhelixcoord: 218..240
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 154..171
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 255..277
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig787contigE_fasciculatus_S2_contig787:19015..19932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig787.16032.1mRNA_E_fasciculatus_S2_contig787.16032.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig787 18898..20892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig787.16032.1 ID=prot_E_fasciculatus_S2_contig787.16032.1|Name=mRNA_E_fasciculatus_S2_contig787.16032.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=306bp
MSNNDVLSWKRGWIPSAIAASLLFLPLESVGLEVFEPGWARGIAAFVALE
VVRVGAVGLLPYWWRDIARRTGPLTDRSREQFGGQLTSLLLSSYLTWSII
RWDWQLTNKLPFIQTVGEDHTGVVFNLMAIMLSYIVHDTWHLVRSWRVNR
NRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLM
RHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPM
PLRSVFLGAVVVSYVVNLYWAWLIVGALFFGNEGKRRGGPTLTVNHPDTQ
KSKDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom