prot_E_fasciculatus_S2_contig786.16025.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig786.16025.1
Unique Name	prot_E_fasciculatus_S2_contig786.16025.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	342

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig786.16025.1 vs. uniprot
Match: D7FTS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS0_ECTSI)

HSP 1 Score: 615 bits (1587), Expect = 1.430e-221
Identity = 329/341 (96.48%), Postives = 335/341 (98.24%), Query Frame = 0

Query:    1 MLSRVANAGARGALRARLPALSAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPFALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGAGVGKYFDDKTAEIKHAQQSAEQEQIKRVTGELATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHMSRESTVKLLEALKGAKIKRVADLRAAEIATALTEVVAKVSADKKLKKAALDNALVTLADPSKAAKVDPVSQVFAQYWKQKAVDTEKNKNKPVALTPEQIAANEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS 341
            MLSRVANAGARGALRARLPA SAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVP ALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGG GVGKYFDD+TAEIK AQQSAEQEQIKRVTG+LATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHMSRESTVKLLEAL+GAKIKRVADLR AEIATALTEVVAKVSADKKLKKAALDNAL+TLADPSKAAKVDPVS+VFAQYWKQKA+DTEKNKNKPVALTPEQIA NEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS
Sbjct:    1 MLSRVANAGARGALRARLPAASAGGRARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPLALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGEGVGKYFDDQTAEIKRAQQSAEQEQIKRVTGDLATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMAAPHMSRESTVKLLEALRGAKIKRVADLRNAEIATALTEVVAKVSADKKLKKAALDNALMTLADPSKAAKVDPVSEVFAQYWKQKAIDTEKNKNKPVALTPEQIATNEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS 341

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BLAST of mRNA_E_fasciculatus_S2_contig786.16025.1 vs. uniprot
Match: A0A836CD66_9STRA (ATP synthase subunit b n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD66_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.240e-25
Identity = 88/279 (31.54%), Postives = 139/279 (49.82%), Query Frame = 0

Query:   27 ARVPPLIQPAFQSFHAGLPSRESAVDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPFALFLTVPALCREWYVMTEETMLMGCFFLFLGAAMDFGGAGVGKYFDDKTAEIKHAQQSAEQEQIKRVTGELATEKARLVE---MQQMDAISKAIAYGNTRRNEAEAMAA--PHMSRESTVKLLEALKGAKIKRVADLRAAEIATALTEVVAKVSADKKLKKAALDNALVTLADPSKAAKVDPVSQVFAQYWKQKAVDTEKNKNKPVALTP 300
            AR+ P   PA Q FHAG+P+R+           E+ +  + +K+      +   +E   L    R +P  L L +PAL +EW V++EET L+GCF LF+G      G  +G   D +   I  A+   E   I+ +   +A   ARL     M  + A+ +      T   +A+ +    PH  RE TV +L+    A+       + A + +A+  V  +V +DKKLKK ALD AL++LADP+KA   D V+ +F Q++K  +   +K  ++   +TP
Sbjct:   17 ARLAPRTAPATQHFHAGIPARK-----------EETQPAETSKILLTPGTI---VEKLGLHDWTRALPVGLILAIPALNQEWIVLSEETQLLGCFMLFVGTIYTKFGDSIGAALDAQADAILDARNKEEDASIEVIKETIAFHHARLASAGIMSDLIALER-----ETMEKQAKLLTVKVPHDMRELTVAMLDTKAAAEANEWHAAQDALVKSAVDTVTEQVQSDKKLKKTALDEALLSLADPAKAPATDAVTGLFTQFFKDTSAQAQKEASQEKTVTP 276

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig786.16025.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig786.16025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FTS0_ECTSI	1.430e-221	96.48	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CD66_9STRA	1.240e-25	31.54	ATP synthase subunit b n=1 Tax=Tribonema minus Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008688	ATP synthase, F0 complex, subunit B/MI25	PFAM	PF05405	Mt_ATP-synt_B	coord: 104..172 e-value: 9.6E-8 score: 31.8
None	No IPR available	PANTHER	PTHR12733:SF3	ATP SYNTHASE F(0) COMPLEX SUBUNIT B1, MITOCHONDRIAL	coord: 1..266
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 141..341
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 111..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 92..110
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..140
IPR013837	ATP synthase, F0 complex, subunit B	PANTHER	PTHR12733	MITOCHONDRIAL ATP SYNTHASE B CHAIN	coord: 1..266

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig786	contig	E_fasciculatus_S2_contig786:10767..16443 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig786.16025.1	mRNA_E_fasciculatus_S2_contig786.16025.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig786 10743..17299 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig786.16025.1 ID=prot_E_fasciculatus_S2_contig786.16025.1|Name=mRNA_E_fasciculatus_S2_contig786.16025.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=342bp
MLSRVANAGARGALRARLPALSAGGRARVPPLIQPAFQSFHAGLPSRESA
VDKPAPSRAEDIEANKNAKLFGDNPRLEGMIEAGKLDSAKRLVPFALFLT
VPALCREWYVMTEETMLMGCFFLFLGAAMDFGGAGVGKYFDDKTAEIKHA
QQSAEQEQIKRVTGELATEKARLVEMQQMDAISKAIAYGNTRRNEAEAMA
APHMSRESTVKLLEALKGAKIKRVADLRAAEIATALTEVVAKVSADKKLK
KAALDNALVTLADPSKAAKVDPVSQVFAQYWKQKAVDTEKNKNKPVALTP
EQIAANEADIRSLCEKVGQDPAMLLASMPKTYTADTPTLFS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013837	ATP_synth_F0_suB
IPR008688	ATP_synth_Bsub_B/MI25