prot_E_fasciculatus_S2_contig7733.15898.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7733.15898.1
Unique Nameprot_E_fasciculatus_S2_contig7733.15898.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length591
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7733.15898.1 vs. uniprot
Match: A0A6H5JZC9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC9_9PHAE)

HSP 1 Score: 600 bits (1547), Expect = 2.340e-204
Identity = 357/535 (66.73%), Postives = 388/535 (72.52%), Query Frame = 0
Query:   60 GGGGLRGNGDRGGDGRFPSEGGGGNFSPRTTYTGFGHVESLWDDNDDEEGGQDIREDGAGLAGDYSAGWGMGGATGPGYQSSYDGGIEAGV---PRSEAAVHPPYHSSTGASAAGNTNAWMWGPPSGEHRHDSTTTTTRPSLDGPPRPSRSTPLFANCSPVQQXXXXXXXXXXXXETAVSGRHQDGDPSSYLESLRGXXXXXXXXXXXSARHYPENQQCRHEGAATAAGGTSGTEENPFGRSSAIGGVGARAHEEVDRETANADARVEMRSTQDILSLFGGFGGTPSTQGGHDRDSPEREAAGSPRRGPTEAPLRSQASEDALMPAGGGVRRAADMRRAQKEARVAAAPPGGG--VAGTATGATSARGATNDAAVTGDWACGTCGVRGSPSSASCRVCGAKRQGLRSDGVAQGGDDDVRGGIDSQEHRVGWPRGDDFGGGGGWQEQASEGGAGEMGDRAVSVSLDSVEGQRLEAGDAAGRWRSCSPDRPAIPQTGTGGDGEGAFGGSGALGTGSNRGQSGPRMQMDMGSSSDSDD 589
            GG  LRGNGDRGGDGRFPS  GGG  SPRTTYTGFGHVESLWD++++E+ GQD  EDGAGLA ++ AGWGMGGA GPGYQ+ YD G E+ V    RSEAAV PPYH STG SA G+TN WMWGPP+GEH           SLDGP RPSRST  FA+ SP QQ            ETAV G H +  PSSYLE LR            SA HYPENQ+C  +GA TAAGGT G EEN FGR +AIGG G+R  EEVDRET    AR+EMRSTQDILSLFGGFGGTPSTQGGHD    ERE A S  RGPTEAPL SQAS DALMP GGG+RRA DMRR QKEAR A         VAG  TGA SARGA+ND AVTGDWACGTCGVRG  SSASCRVCGAKRQ LRSDGVAQGGDD VRGGI SQE RVGW RGDDFGGG   Q++A EG AG++GDR V + +   EG  LEAG A GRWR+ SPDRPA PQ+G GG GEGAFGGS  L T S+  + G RMQMDMGSSSDSD+
Sbjct:  293 GGVSLRGNGDRGGDGRFPSNRGGGKLSPRTTYTGFGHVESLWDEDEEEDDGQDRHEDGAGLADEHRAGWGMGGAAGPGYQNPYDVGNESDVLQQARSEAAVQPPYHRSTGTSAVGSTNTWMWGPPAGEH-----------SLDGPLRPSRSTADFASGSPAQQQQQERGRHD---ETAVPGHHGEDGPSSYLERLRRGNDDDDDVGRRSASHYPENQRCGRDGAVTAAGGTGGREENTFGRGNAIGGAGSRVSEEVDRETPGDGARMEMRSTQDILSLFGGFGGTPSTQGGHDHGEQERETAESQWRGPTEAPLGSQASGDALMPVGGGIRRAVDMRRTQKEARAAXXXXXXXXXVAGAVTGAASARGASNDDAVTGDWACGTCGVRGGSSSASCRVCGAKRQELRSDGVAQGGDDGVRGGIGSQEGRVGWGRGDDFGGGERPQKKALEGRAGDVGDRPVILGI--AEG--LEAG-APGRWRTSSPDRPAFPQSGAGGGGEGAFGGS-VLETPSSCRKIGHRMQMDMGSSSDSDE 807          
BLAST of mRNA_E_fasciculatus_S2_contig7733.15898.1 vs. uniprot
Match: D8LRG4_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG4_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 4.240e-130
Identity = 240/350 (68.57%), Postives = 259/350 (74.00%), Query Frame = 0
Query:  242 GDPSSYLESLRGXXXXXXXXXXXSARHYPENQQCRHEGAATAAGGTSGTEENPFGRSSAIGGVGARAHEEVDRETANADARVEMRSTQDILSLFGGFGGTPSTQGGHDRDSPEREAAGSPRRGPTEAPLRSQASEDALMPAGGGVRRAADMRRAQKEARVAAAP--PGGGVAGTATGATSARGATNDAAVTGDWACGTCGVRGSPSSASCRVCGAKRQGLRSDGVAQGGDDDVRGGIDSQEHRVGWPRGDDFGGGGGWQEQASEGGAGEMGDRAVSVSLDSVEGQRLEAGDAAGRWRSCSPDRPAIPQTGTGGDGEGAFGGSGALGTGSNRGQSGPRMQMDMGSSSDSDD 589
            G+P   +E LR            SA HYPENQ+C  +GA TAAGGT G EEN FGR +AIGG GAR  EEVDRET    ARVEMRSTQDILSLFGGFGGTPSTQGGHD  S  RE A + R GPTEAPL SQAS DAL P GGG+RRAADM RAQKEAR AAA            TGA+SARGA ND AV GDW CGTCGVRG PSSASCRVCGAKR+GLRSDGVAQGGDD VRGGI SQE RVGW RGDDFGGGG  QE+ASEGGAG++GDR V++ +   EG  LEAG A GRWR+ SPDRPA PQ+  GG GEGA G S  L T S+  + GPRMQMDMGSSSDSDD
Sbjct:  149 GEPELEMELLR-RGDDGDDAGGRSASHYPENQRCGRDGAVTAAGGTGGREENTFGRGNAIGGAGARVPEEVDRETPGYVARVEMRSTQDILSLFGGFGGTPSTQGGHDHGSHGRETAETQRHGPTEAPLGSQASGDALRPVGGGIRRAADMHRAQKEARAAAATVXXXXXXXXXXTGASSARGAPNDDAVMGDWVCGTCGVRGDPSSASCRVCGAKREGLRSDGVAQGGDDGVRGGIGSQEGRVGWGRGDDFGGGGRRQEKASEGGAGDVGDRPVTLGI--AEG--LEAGGAPGRWRTSSPDRPAFPQSRAGGGGEGACGVS-VLETPSSCQKIGPRMQMDMGSSSDSDD 492          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7733.15898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZC9_9PHAE2.340e-20466.73RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LRG4_ECTSI4.240e-13068.57RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1060.10coord: 422..463
e-value: 4.0E-6
score: 27.9
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 429..458
score: 8.806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7733contigE_fasciculatus_S2_contig7733:586..2358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7733.15898.1mRNA_E_fasciculatus_S2_contig7733.15898.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7733 552..2624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7733.15898.1 ID=prot_E_fasciculatus_S2_contig7733.15898.1|Name=mRNA_E_fasciculatus_S2_contig7733.15898.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=591bp
MTTRPGAVAARQPPPHRARPPAAAAAKRENCSRRSRRPRGESRPPPPRLT
ILGGPCRWEGGGGLRGNGDRGGDGRFPSEGGGGNFSPRTTYTGFGHVESL
WDDNDDEEGGQDIREDGAGLAGDYSAGWGMGGATGPGYQSSYDGGIEAGV
PRSEAAVHPPYHSSTGASAAGNTNAWMWGPPSGEHRHDSTTTTTRPSLDG
PPRPSRSTPLFANCSPVQQQQQQQQQLPHHDETAVSGRHQDGDPSSYLES
LRGGDDDDDDAGGHSARHYPENQQCRHEGAATAAGGTSGTEENPFGRSSA
IGGVGARAHEEVDRETANADARVEMRSTQDILSLFGGFGGTPSTQGGHDR
DSPEREAAGSPRRGPTEAPLRSQASEDALMPAGGGVRRAADMRRAQKEAR
VAAAPPGGGVAGTATGATSARGATNDAAVTGDWACGTCGVRGSPSSASCR
VCGAKRQGLRSDGVAQGGDDDVRGGIDSQEHRVGWPRGDDFGGGGGWQEQ
ASEGGAGEMGDRAVSVSLDSVEGQRLEAGDAAGRWRSCSPDRPAIPQTGT
GGDGEGAFGGSGALGTGSNRGQSGPRMQMDMGSSSDSDDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2