prot_E_fasciculatus_S2_contig7730.15896.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7730.15896.1
Unique Nameprot_E_fasciculatus_S2_contig7730.15896.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length547
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7730.15896.1 vs. uniprot
Match: D7FS21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS21_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 1.260e-176
Identity = 318/550 (57.82%), Postives = 374/550 (68.00%), Query Frame = 0
Query:    1 RKCERNACRPLGPAPSPEPPCHGHMTDLDTGQSSKAFWGAPDGAEAAQAGLDLTAPTSRRKKKRKVGPPRDHPVEAAAVGAAPAMERVSEASSXXXXXXXXXXXXXGGAPNAIAGPSQRAKGGGEGETQSSPRVQPQDSSGKGGVPVVAPFSSASTAPAAGXXXXXXXXXXXXXXXACGAPRVGLDKFYQTEVWLGNHDCHCSICGNTGRPADEMSVTVARVYGRPEDLLHCNGCPRAFHRACLPAGTASQLAATYRALTDAWFCPTCTSLGQKSLVYKQQTPDWEVAARVRARGDGAPLHLEDVVSTAHPLFGLIKTCERNRDNEVLSQFRELEKKSPELLQMRLNNEAKVAGRGAAXXXXXXXXQAEMMRRPCESATTSSDA---PVTVAATRYHGNWYQVVPVCELLLAACESTGLGGETAGHGKHTFDQLVDRMLPSRLHTGVSAVEGCGVFATVQIEPMDVLAEHTGQRITRAVAEQRVAIYRKMNFHVSAREGRMCIARGCVVQLAGDSMYVDSVAVGSMSVGYNSPRLFNHACKPNAYLHTVS 547
            R+C+   CRP GPAPSP P  H H  +  TGQ S+ FWG  DG  AA A   + APTS R+K++++G       EAAA GA PAMERVS   +        XXXXX         P QRA+G  EGETQ  PR + QDSS  GGVPVV    S++ A AA XXXXXXXXXXXXXXX          + +QTE W G HDCHCSICGN G      +++VARVYGRPEDL+ C+GCPRAFHR CLPAGT SQLAAT+RA  DAWFC  CT +G+ SLVY QQ PDW V A VRARGDGAPL LEDV+ST+HPLF +IK    + D EVLS++R LEK +P +LQ RLNNEA+ AGR AA        QAEMMRRPCE AT+++     PV     R       VVPVCELLLAA +STGL GETAG+G+ TF QL  ++ P+RL TG SAVEGCGVFA   I+PMDVLAE TG+RITR VA+QRV  YRKM+FHVS+      + +GCVVQLAGD  Y+DSV VG ++ G  SPRLFNH+C+ N YLHTV+
Sbjct:   17 RQCQGENCRPPGPAPSPVPSFHSHWGNSGTGQVSRGFWGPIDGPAAANALRAVAAPTSGRRKRQRLG----QRGEAAATGAEPAMERVSAPEASSAAGGSTXXXXXXXXXXXXXXPPQRAEGREEGETQPPPRAKAQDSSRTGGVPVV---GSSAPAGAAXXXXXXXXXXXXXXXXXXXXXXXACGECHQTETWRGRHDCHCSICGNKGILVGGTTLSVARVYGRPEDLISCDGCPRAFHRRCLPAGTDSQLAATFRARVDAWFCSHCTKMGRTSLVY-QQNPDWTVVATVRARGDGAPLFLEDVISTSHPLFDIIKAWALHGDKEVLSKYRALEKNNPAVLQTRLNNEAEAAGRAAAGRA-----QAEMMRRPCEGATSANAGDWMPVNATPARDLQTSKPVVPVCELLLAAYQSTGLDGETAGNGQLTFQQLFGKISPNRLRTGASAVEGCGVFAADIIQPMDVLAEFTGERITRTVAQQRVVAYRKMDFHVSS------LRQGCVVQLAGDC-YLDSVTVGPLAEGC-SPRLFNHSCQANTYLHTVA 545          
BLAST of mRNA_E_fasciculatus_S2_contig7730.15896.1 vs. uniprot
Match: D7G1Q1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q1_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 9.530e-97
Identity = 177/309 (57.28%), Postives = 202/309 (65.37%), Query Frame = 0
Query:   85 MERVSEASSXXXXXXXXXXXXXGGAPNAIAGPSQRAKGGGEGETQSSPRVQPQDSSGKGGVPVVAPFSSASTAPAAGXXXXXXXXXXXXXXX----ACGAPRVGLDKFYQTEVWLGNHDCHCSICGNTGRPADEMSVTVARVYGRPEDLLHCNGCPRAFHRACLPAGTASQLAATYRALTDAWFCPTCTSLGQKSLVYKQQTPDWEVAARVRARGDGAPLHLEDVVSTAHPLFGLIKTCERNRDNEVLSQFRELEKKSPELLQMRLNNEAKVAGR--GAAXXXXXXXXQAEMMRRPCESATTSSDAPVT 387
            MERVS   +             G A  A+AGP QRA+G  EGETQ  PR + QDSS  GGVPVV P + A  APAA         XXXXXXX    ACG       + +QTE W G HDCHCSICGN G      +++VARVYGRPEDL+ C+GCPRAFHR CLPAGT SQLAAT+RA  DAWFC  CT +G+ SLVY QQ PDW V A VRARGDGAPL LEDV+ T+HPLF  IK CE N D EVLS++R LEK +P +LQ RLNNEA+  GR   AA        QAEMMRRPCE AT+++  P T
Sbjct:    1 MERVSAPEASSAAGGSTATAPAGSATTAMAGPPQRAEGREEGETQPPPRAKAQDSSRTGGVPVVGPSAPAGAAPAADEEGKGRGAXXXXXXXXXXXACG-------ECHQTETWRGRHDCHCSICGNKGVLVGGTTLSVARVYGRPEDLISCDGCPRAFHRRCLPAGTDSQLAATFRARVDAWFCSNCTKMGRTSLVY-QQNPDWTVVATVRARGDGAPLLLEDVIRTSHPLFDAIKACELNVDEEVLSKYRALEKNNPAVLQTRLNNEAEAEGRTAAAAGRAAAGRAQAEMMRRPCEGATSATATPYT 301          
BLAST of mRNA_E_fasciculatus_S2_contig7730.15896.1 vs. uniprot
Match: D7G1Q0_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q0_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 3.380e-12
Identity = 50/125 (40.00%), Postives = 60/125 (48.00%), Query Frame = 0
Query:  453 FATVQIEPMDVLAEHTGQRITRAVAEQRVAIYRKMNFH------------------------------VSAREGRMCIARGCVVQLAGDSMYVDSVAVGSMSVGYNSPRLFNHACKPNAYLHTVS 547
            FA   I+PMDVLAE  G +I +    QRVA YRKMNFH                                            VVQ+AGD  Y+DSV V  ++ G  SPRLFNH+C+PN YLHTV+
Sbjct:   29 FAAKSIQPMDVLAEFKGLKIKKTATLQRVATYRKMNFHGCGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQIAGDC-YLDSVTVDPLAEGC-SPRLFNHSCQPNTYLHTVA 151          
BLAST of mRNA_E_fasciculatus_S2_contig7730.15896.1 vs. uniprot
Match: A0A6H5KCC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.070e-5
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0
Query:  466 EHTGQRITRAVAEQRVAIYRKMNFHVSAREGR 497
            E TG++ITRAVA+QRVA YRKM+FHV AREG+
Sbjct:   10 EFTGEKITRAVAKQRVATYRKMDFHVRAREGK 41          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7730.15896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS21_ECTSI1.260e-17657.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1Q1_ECTSI9.530e-9757.28PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D7G1Q0_ECTSI3.380e-1240.00SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KCC1_9PHAE2.070e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 201..269
e-value: 1.3E-7
score: 41.3
NoneNo IPR availableGENE3D2.170.270.10coord: 419..547
e-value: 1.1E-10
score: 43.3
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 426..545
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 196..289
e-value: 2.7E-10
score: 41.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 199..271
score: 9.704
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 194..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7730contigE_fasciculatus_S2_contig7730:599..5992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7730.15896.1mRNA_E_fasciculatus_S2_contig7730.15896.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7730 599..5992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7730.15896.1 ID=prot_E_fasciculatus_S2_contig7730.15896.1|Name=mRNA_E_fasciculatus_S2_contig7730.15896.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=547bp
RKCERNACRPLGPAPSPEPPCHGHMTDLDTGQSSKAFWGAPDGAEAAQAG
LDLTAPTSRRKKKRKVGPPRDHPVEAAAVGAAPAMERVSEASSAAGGSST
ASATTAGGAPNAIAGPSQRAKGGGEGETQSSPRVQPQDSSGKGGVPVVAP
FSSASTAPAAGAAGAASGGASAAGGAACGAPRVGLDKFYQTEVWLGNHDC
HCSICGNTGRPADEMSVTVARVYGRPEDLLHCNGCPRAFHRACLPAGTAS
QLAATYRALTDAWFCPTCTSLGQKSLVYKQQTPDWEVAARVRARGDGAPL
HLEDVVSTAHPLFGLIKTCERNRDNEVLSQFRELEKKSPELLQMRLNNEA
KVAGRGAAGRAAASRAQAEMMRRPCESATTSSDAPVTVAATRYHGNWYQV
VPVCELLLAACESTGLGGETAGHGKHTFDQLVDRMLPSRLHTGVSAVEGC
GVFATVQIEPMDVLAEHTGQRITRAVAEQRVAIYRKMNFHVSAREGRMCI
ARGCVVQLAGDSMYVDSVAVGSMSVGYNSPRLFNHACKPNAYLHTVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR001965Znf_PHD