prot_E_fasciculatus_S2_contig7615.15783.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7615.15783.1
Unique Nameprot_E_fasciculatus_S2_contig7615.15783.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length73
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: D7FV36_ECTSI (Mediator of RNA polymerase II transcription subunit 21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV36_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.270e-33
Identity = 73/105 (69.52%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    1 MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARG--------------------------------SLADGVLKQARALDGLIDVLPGAELREDQQME 73
            MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARG                                SLADGVLKQARALDGLIDVLPGAELREDQQME
Sbjct:   21 MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGVAPLQQQQPGQPDAAPLRRAVTTNAAWADTVQSLADGVLKQARALDGLIDVLPGAELREDQQME 125          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: K3X2M6_GLOUD (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2M6_GLOUD)

HSP 1 Score: 61.6 bits (148), Expect = 3.190e-10
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    2 EVDKDAVSAMQESVDQLALSMFDSLRLIPFS------EEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            E+  D VS +QESVD++ALSMF++LRL+P S      +E    A  SLA+ VL+  +  D LID LPG E  E +Q+E
Sbjct:   29 EIALDKVSMLQESVDKMALSMFNALRLLPASTGDEGSKEETAAAIRSLANDVLRMVKETDALIDDLPGLEKTESEQLE 106          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A5D6YEG9_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEG9_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 8.150e-9
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFSEEVKGG---ARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D VS +QESVD++ALSMF++LRL+P     +     A  SLAD VL+  +  D LID LPG +  E  Q+E
Sbjct:   26 DKVSLLQESVDKMALSMFNALRLLPVGSGDRAETATAIRSLADDVLRMVKETDALIDDLPGLDKTESDQLE 96          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A8K1CF31_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF31_PYTOL)

HSP 1 Score: 57.8 bits (138), Expect = 4.980e-8
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFS------EEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D V+A+Q+SVD++ALSMF++LRL+P +      +E    A  +LA  VLK  +  D LID LPG +  ED+Q+E
Sbjct:   34 DKVTALQDSVDKMALSMFNALRLLPATLGDDKGKEENVAAIKALAAEVLKTVKETDALIDDLPGLDKTEDEQLE 107          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A2P4YLZ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLZ2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 9.260e-8
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFS-------EEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D VS +QESVD++ALSMF++LRL+P +       +E K  A  +LA+ VLK  +  D LID LPG +  E +QME
Sbjct:   34 DKVSLLQESVDKMALSMFNALRLLPVATGDDTKKQETKD-AITTLANDVLKMVQETDALIDDLPGLDKTEAEQME 107          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: M4BEM1_HYAAE (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEM1_HYAAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.180e-7
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFS--EEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D VS +QESVD++ALSMF++LRL+P +  ++ K     +LA+ VLK  +  D LID LPG +  E +QME
Sbjct:   37 DKVSLLQESVDKMALSMFNALRLLPATTGDDTKNQIV-TLANDVLKMVQETDVLIDDLPGLDKTEAEQME 105          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A0W8DSH2_PHYNI (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DSH2_PHYNI)

HSP 1 Score: 56.6 bits (135), Expect = 1.240e-7
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFS-------EEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D VS +QESVD++ALSMF++LRL+P +       +E K  A  +LA+ VLK  +  D LID LPG +  E +QME
Sbjct:   37 DKVSLLQESVDKMALSMFNALRLLPAATGDDAKNQETKD-AITTLANDVLKMVQETDALIDDLPGLDKTEAEQME 110          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A3M6VDW3_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDW3_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.740e-6
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPFS-------EEVKGGARGSLADGVLKQARALDGLIDVLPG 63
            D VS +QESVD++ALSMF++LRL+P +       +E K  A  +LA+ VLK  +  D LID LPG
Sbjct:   37 DKVSLLQESVDKMALSMFNALRLLPAATGDDTKKQETKD-AITTLANDVLKMVQETDALIDDLPG 100          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: A0A024GHF5_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GHF5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 4.050e-6
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPF--------SEEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D V+A+Q+SVD +ALSMF++LRL+P         S+E    A   LA  V+   +  D LID LPG E  E  Q+E
Sbjct:   33 DTVTALQDSVDNMALSMFNALRLLPTKGTQDDPASDETCANAIKQLAQDVIDAYKRTDCLIDQLPGLERTEIDQLE 108          
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Match: F0WG39_9STRA (Mediator of RNA polymerase II transcription subunit 21 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG39_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.830e-6
Identity = 32/76 (42.11%), Postives = 42/76 (55.26%), Query Frame = 0
Query:    6 DAVSAMQESVDQLALSMFDSLRLIPF--------SEEVKGGARGSLADGVLKQARALDGLIDVLPGAELREDQQME 73
            D V+ +Q SVD +ALSMF++LRL+P         S+E    A   LA  VL   +  D LID LPG +  E  Q+E
Sbjct:   33 DTVTVLQNSVDNMALSMFNALRLLPAKGPQNDPASDETCSNAINLLAQDVLDAFKRTDRLIDQLPGLDRTEKDQLE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7615.15783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FV36_ECTSI2.270e-3369.52Mediator of RNA polymerase II transcription subuni... [more]
K3X2M6_GLOUD3.190e-1047.44Mediator of RNA polymerase II transcription subuni... [more]
A0A5D6YEG9_9STRA8.150e-947.89Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CF31_PYTOL4.980e-845.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YLZ2_9STRA9.260e-848.00Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
M4BEM1_HYAAE1.180e-748.57Mediator of RNA polymerase II transcription subuni... [more]
A0A0W8DSH2_PHYNI1.240e-748.00Mediator of RNA polymerase II transcription subuni... [more]
A0A3M6VDW3_9STRA1.740e-649.23Mediator of RNA polymerase II transcription subuni... [more]
A0A024GHF5_9STRA4.050e-643.42Mediator of RNA polymerase II transcription subuni... [more]
F0WG39_9STRA4.830e-642.11Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 6..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7615contigE_fasciculatus_S2_contig7615:216..554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7615.15783.1mRNA_E_fasciculatus_S2_contig7615.15783.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7615 216..554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7615.15783.1 ID=prot_E_fasciculatus_S2_contig7615.15783.1|Name=mRNA_E_fasciculatus_S2_contig7615.15783.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=73bp
MEVDKDAVSAMQESVDQLALSMFDSLRLIPFSEEVKGGARGSLADGVLKQ
ARALDGLIDVLPGAELREDQQME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037212Med7/Med21-like