prot_E_fasciculatus_S2_contig759.15749.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig759.15749.1
Unique Nameprot_E_fasciculatus_S2_contig759.15749.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length348
Homology
BLAST of mRNA_E_fasciculatus_S2_contig759.15749.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 9.930e-84
Identity = 182/309 (58.90%), Postives = 204/309 (66.02%), Query Frame = 0
Query:    1 MSAAVSDAPASAAXXXXXXXXAD-VEAPAASLDPTRDHQLRPGGHATSSGDAAAAELATDVDAGNAAASAGGAQPDSTPRPMETSSLPFLAGMAAMMSMIFILGDLMNKRMLHPVSSGVFLLSVSYCVAMLRRQWARAGD-TWAGHNNKFTKEAREELITYFVFGTDPEEPPPEAGXXXXXXXXXXXXXXXXXXXXASSDELQVSRTSSRKWRRESQRSSGDGDDDATVGSASVSGGVGMQNGGIDANNANTGGSVSANTPVPSTGPCSPAPPEDEEV-GEGEKAEQDQRGGVRNSPNIRTEPLTCVSV 306
            MSAAVS+APASAA         D VEAPA  LDPTRD QLRPGGH T+SGDAAA ELAT +DAG+AA  AGGAQ  +TPR +E SSLPFLAG+A ++S IFILGDL+NKRMLHP S  VFLLSVSYCVAMLRRQWA  G  T  G NN FTKEAR+ELITYFVFG  PE  P EAG                    AS DELQVSRTSSR+WRR               G A VS G   +NG IDANNA+TGGS+SANTP+PSTGPCSPAP E+E + G+   A   +   V  SP   T  +T  + 
Sbjct:    1 MSAAVSNAPASAASAASTTMATDDVEAPA--LDPTRD-QLRPGGHPTTSGDAAAVELATGLDAGDAAGPAGGAQLYTTPRALEGSSLPFLAGLAGIISTIFILGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGGGTREGRNNSFTKEARKELITYFVFGAGPEGLPTEAGAGAGAGKKGNRPKQQERGNGASGDELQVSRTSSRRWRRXXXXXXXXXXXXXXXG-AGVSDGGAARNGRIDANNADTGGSLSANTPMPSTGPCSPAPLEEEVLDGDAATAATAEDAAVTASPGHATAAVTAAAT 305          
BLAST of mRNA_E_fasciculatus_S2_contig759.15749.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 7.670e-62
Identity = 135/175 (77.14%), Postives = 144/175 (82.29%), Query Frame = 0
Query:    1 MSAAVSDAPASAAXXXXXXXXADVEAPAASLDPTRDHQLRPGGHATSSGDAAAAELATDVDAGNAAASAGGAQPDSTPRPMETSSLPFLAGMAAMMSMIFILGDLMNKRMLHPVSSGVFLLSVSYCVAMLRRQWARAGD-TWAGHNNKFTKEAREELITYFVFGTDPEEPPPEAG 174
            MSAAVS APA   XXXXXXXX   EAP  +LDPTRD QLRPGGHAT+SGDAAA ELATD+DAG+AAA AG  QP++TPR  E SSLP L+GMAAMMSMIFILGDL+NKRMLHPVS+GVFLLSVSYCVAMLRRQWA  G  T  G NN FTKEAREELITYFVFG  PE  P EAG
Sbjct:   20 MSAAVSHAPAXXXXXXXXXXXXXXEAP--TLDPTRD-QLRPGGHATTSGDAAAVELATDLDAGDAAAPAGSEQPNNTPRGREGSSLPLLSGMAAMMSMIFILGDLVNKRMLHPVSTGVFLLSVSYCVAMLRRQWASTGGGTREGCNNSFTKEAREELITYFVFGAGPEGLPTEAG 191          
BLAST of mRNA_E_fasciculatus_S2_contig759.15749.1 vs. uniprot
Match: A0A6H5JDD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD0_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 4.690e-47
Identity = 102/141 (72.34%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    1 MSAAVSDAPASAAXXXXXXXXA-DVEAPAASLDPTRDHQLRPGGHATSSGDAAAAELATDVDAGNAAASAGGAQPDSTPRPMETSSLPFLAGMAAMMSMIFILGDLMNKRMLHPVSSGVFLLSVSYCVAMLRRQWARAGDT 140
            MSAAVS+APASAA        A DVEAP  +L PTRD QLRPGGHAT  GDAAA ELATD+DAG+AAA AGGAQ ++TPRP+E SSLPFLAG+AA++S IFI+GDL+NKRMLHP S  VFLLSVSYCVAMLRRQWA  G++
Sbjct:    1 MSAAVSNAPASAASAAATMATAGDVEAP--TLYPTRD-QLRPGGHATMPGDAAAVELATDLDAGDAAAPAGGAQLNTTPRPLEGSSLPFLAGLAAIISTIFIVGDLLNKRMLHPASIVVFLLSVSYCVAMLRRQWASTGES 138          
BLAST of mRNA_E_fasciculatus_S2_contig759.15749.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 3.540e-8
Identity = 43/76 (56.58%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  207 SRKWRRESQRSSGDGDDDATVGSASVSGGVGMQNGGIDANNANTGGSVSANTPVPSTGPCSPAPPEDEEVGEGEKA 282
            SR+WRRE QR S D             GG   +NG IDANNA+T GS+SAN P PSTGPCSPAP E EEV  G+ A
Sbjct:   13 SRRWRRERQRGSSDXXXXXXXXXXXXXGGA-ARNGRIDANNADTRGSLSANAPAPSTGPCSPAPLEAEEVVHGDAA 87          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig759.15749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRQ1_ECTSI9.930e-8458.90RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI7.670e-6277.14RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JDD0_9PHAE4.690e-4772.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEY0_9PHAE3.540e-856.58RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..347
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig759contigE_fasciculatus_S2_contig759:3634..6357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig759.15749.1mRNA_E_fasciculatus_S2_contig759.15749.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig759 2741..7736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig759.15749.1 ID=prot_E_fasciculatus_S2_contig759.15749.1|Name=mRNA_E_fasciculatus_S2_contig759.15749.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=348bp
MSAAVSDAPASAASAAAAIAAADVEAPAASLDPTRDHQLRPGGHATSSGD
AAAAELATDVDAGNAAASAGGAQPDSTPRPMETSSLPFLAGMAAMMSMIF
ILGDLMNKRMLHPVSSGVFLLSVSYCVAMLRRQWARAGDTWAGHNNKFTK
EAREELITYFVFGTDPEEPPPEAGAGAGAGKEETRQKQQERGNGASSDEL
QVSRTSSRKWRRESQRSSGDGDDDATVGSASVSGGVGMQNGGIDANNANT
GGSVSANTPVPSTGPCSPAPPEDEEVGEGEKAEQDQRGGVRNSPNIRTEP
LTCVSVNPSNRCSTRGNVSNGGRGRPGQGTLRLGRMVDGPSVHRVLR*
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