prot_E_fasciculatus_S2_contig7583.15744.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7583.15744.1
Unique Nameprot_E_fasciculatus_S2_contig7583.15744.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length183
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A6H5KQ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ32_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 9.510e-128
Identity = 173/182 (95.05%), Postives = 179/182 (98.35%), Query Frame = 0
Query:    1 MADFRAHAQAVTGLAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQEGKIVSGGEDGAVKTYVVPERNHD 182
            +A FRAH+QAVTGL GPGGVGGPQ AAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCS+SGRMLATGHPDARVRIWDTRTQGET+TRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQ+GKIVSGGEDGAVKTYVVPERN+D
Sbjct:   34 LAGFRAHSQAVTGLVGPGGVGGPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQDGKIVSGGEDGAVKTYVVPERNND 215          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: D8LI35_ECTSI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI35_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 4.220e-122
Identity = 171/182 (93.96%), Postives = 177/182 (97.25%), Query Frame = 0
Query:    1 MADFRAHAQAVTGLAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQEGKIVSGGEDGAVKTYVVPERNHD 182
            +A FRAHAQAVTGLAGPGGVG PQ AAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCS+SGRMLATGHPDARVRIWDTRTQGET+TRASLSSHKQWVT VKWAPGSETMVLSC HDG+VKLWDIRSTLPLHSAQAH+GKALCCGWQ+GKIVSGGEDGAVKTYVVPERNHD
Sbjct:  284 LASFRAHAQAVTGLAGPGGVGRPQTAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSDSGRMLATGHPDARVRIWDTRTQGETLTRASLSSHKQWVTGVKWAPGSETMVLSCSHDGSVKLWDIRSTLPLHSAQAHRGKALCCGWQDGKIVSGGEDGAVKTYVVPERNHD 465          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A836CE58_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE58_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.270e-35
Identity = 75/182 (41.21%), Postives = 100/182 (54.95%), Query Frame = 0
Query:    4 FRAHAQAVTG--LAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGC------SESGRMLATGHPDARVRIWDTRTQ-GETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQEGKIVSGGEDGAVKTYVV 176
            F+AH+QAVTG  LAGP                TLY+ S D ++K WDA+RQDC+ T+   KAV C+        + +  +LATGHPD R+R+WD RT+ GET+T A+L++   WV  VKWA GS                   S   L +  AH+G ALC  W  G + SGG+DG V+T+ V
Sbjct:  324 FKAHSQAVTGVYLAGP---------------DTLYTGSWDHSLKAWDAQRQDCVRTMACAKAVACMDAQGGDDAAAASGLLATGHPDGRIRVWDVRTKAGETLTLATLAARGGWVYGVKWAHGSAYNXXXXXXXXXXXXXXXXSGAALRTLPAHKGAALCVAWHAGGVASGGDDGVVRTFKV 490          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A7S3Q0R3_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0R3_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.930e-34
Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 0
Query:   32 SSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRT----QGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQ--GKALCCGWQEGKIVSGGEDGAVKTY 174
            S+T+ ++S D ++KTWD E Q+ + TLN  K VT LG   +  ++ATGHPD  VR+WD R+    +G         SH+ W++ V+W+P    ++ S  HDG+VK+WDIRS++PLH+ +AH    KALC  + E  I SGG D  VK +
Sbjct:  312 SNTIITSSWDHSIKTWDVESQNNILTLNGSKVVTALGRCHNSDVVATGHPDCTVRLWDMRSSSKNEGNVFDNTLRPSHRSWISAVEWSPVDPFVMASTSHDGSVKVWDIRSSVPLHTIKAHAKGSKALCLSFTEKAIFSGGSDCIVKQF 460          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A6G0XCT8_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCT8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.380e-34
Identity = 64/152 (42.11%), Postives = 89/152 (58.55%), Query Frame = 0
Query:   32 SSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRT--QGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQEGK---IVSGGEDGAVKTYVVPE 178
            S   YSAS+DR++K WD   Q C  T+     ++ +  S +G +L+  HPD  +R+WD R    G ++ +A+  SHKQWV+ V+W+P      +SCG+DGAVKLWD RS++PL +  AH GKAL   W         SGGED  +K Y   E
Sbjct:  256 SHIAYSASMDRSIKLWDLTTQQCTQTMVGSSTLSDISVSSAGTVLSA-HPDNAIRLWDPRAAKSGTSLVQATFQSHKQWVSAVEWSPSQAHQFVSCGYDGAVKLWDSRSSIPLFTLAAHTGKALDVAWLSNAKPAFASGGEDCQLKFYATGE 406          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A6U3SDZ9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SDZ9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.220e-33
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0
Query:   33 STLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRT------QGETITRASLS----SHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHS--AQAHQGKALCCGWQEGKIVSGGEDGAVKTYV 175
            +TL + S D +VK WD E+ DC+ TLN  + VT LG   +  ++ATGHPD  VR+WD RT        ++ T+ S S    SHK WV+ V+W+P    ++ S  HDG VK+WDIRS+LPLH+  AQ    K LC  + +G I SGG D  V+ + 
Sbjct:  367 NTLLTGSWDHSVKVWDIEKSDCILTLNGARVVTSLGRCHNSDVVATGHPDCTVRLWDMRTGMNASNSKQSSTQVSDSILKPSHKSWVSAVEWSPTDPYVLASTSHDGTVKMWDIRSSLPLHTIRAQPKGQKGLCLAYGDGAIYSGGSDCIVRKFA 521          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A1Y1IFE5_KLENI (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFE5_KLENI)

HSP 1 Score: 132 bits (331), Expect = 2.470e-33
Identity = 64/147 (43.54%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   32 SSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCS-ESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGW-QEGKIVSGGEDGAVKTYVV 176
            + T++SAS D +V+TWD +      T+   K +  L    E G +LATG  D  +RIWD+R    T +   L SHK W+T VKW       +LS  HDG VK+WD+RS +PLH+ QAH  KALC  W QE  IVSGG D  ++ + +
Sbjct:  276 ADTIHSASWDHSVRTWDVQAAVNTSTITGSKVILALSVGGEGGALLATGGADPAIRIWDSRDSSSTGSAIQLLSHKGWITAVKWHKTRTHQLLSTSHDGTVKMWDVRSKVPLHTVQAHTVKALCVDWFQEATIVSGGADNQLRFHAL 422          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: L1IZK0_GUITC (NLE domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZK0_GUITC)

HSP 1 Score: 131 bits (329), Expect = 2.520e-33
Identity = 69/151 (45.70%), Postives = 87/151 (57.62%), Query Frame = 0
Query:    7 HAQAVTGLAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGW 157
            H QAVTG+     VGG Q          + S   D  VK+WDAE+Q CL  L +  AV  +  S SG + A+ H D  VR+WD R     + R SL+SHK WV  V W+P SE  ++SC HD  +KLWD RS++PLH+  AH GKALC  W
Sbjct:  251 HTQAVTGVE----VGGRQ---------EIVSGGWDHTVKSWDAEKQQCLTNLTSNSAVNGVAISLSG-LFASAHADRAVRVWDPR--AGALVRKSLASHKGWVNAVSWSPSSEHHLVSCSHDHTIKLWDFRSSVPLHTIAAHDGKALCVSW 385          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A2R5GAP8_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAP8_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.400e-33
Identity = 58/152 (38.16%), Postives = 88/152 (57.89%), Query Frame = 0
Query:   33 STLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQGKALCCGWQEG--KIVSGGEDGAVKTYVVPERNHD 182
            STL+S S DR+++ WD  R+ C   LN  K VT +  + +   +ATGH D +VR+WD+R  GE I + SL SH+ W+T V+W+P    ++ S   D  +KLWD+RS++PLH+ ++H  K     W      ++S G D  ++ Y V     D
Sbjct:  381 STLFSGSWDRSIRAWDVVREVCTIKLNGNKVVTAIAHNPTTATIATGHADEQVRLWDSRVTGEAIVKLSLKSHEAWITSVQWSPSRPHLLASASQDQTIKLWDVRSSVPLHTLKSHTNKVFGLSWDASGTMLMSAGADSMLRAYRVGTEKSD 532          
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Match: A0A0H5RPD5_9EUKA (NLE domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RPD5_9EUKA)

HSP 1 Score: 131 bits (329), Expect = 4.950e-33
Identity = 64/177 (36.16%), Postives = 97/177 (54.80%), Query Frame = 0
Query:    7 HAQAVTGLAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAERQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRASLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQ---GKALCCGWQ-EGKIVSGGEDGAVKTYVVPER 179
            H QA+TGL  P               + LYSAS DR ++ WD  +   +HT NAP A++CL  + +  + A GH D  VR++D RT    I  ++L  H+ WV+ + W P ++  ++SC HD  +K+WDIRS++ LH+ +A Q   GK    GW  +  IV GG DG +  +   ++
Sbjct:  264 HTQAITGLCWP-------------HQNALYSASWDRTIRHWDVAQAKAVHTWNAPDAISCLSFNLAANLFAAGHVDRSVRLYDPRTNDAAIVHSTLKGHQAWVSAIAWQPSNQHRLVSCSHDRTLKVWDIRSSICLHTLKAEQDGHGKTFAIGWAFDETIVCGGTDGILCLHTAKKQ 427          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7583.15744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ32_9PHAE9.510e-12895.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI35_ECTSI4.220e-12293.96Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A836CE58_9STRA3.270e-3541.21Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A7S3Q0R3_9STRA2.930e-3442.95Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6G0XCT8_9STRA9.380e-3442.11Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6U3SDZ9_9STRA2.220e-3343.87Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Y1IFE5_KLENI2.470e-3343.54Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
L1IZK0_GUITC2.520e-3345.70NLE domain-containing protein (Fragment) n=1 Tax=G... [more]
A0A2R5GAP8_9STRA3.400e-3338.16Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A0H5RPD5_9EUKA4.950e-3336.16NLE domain-containing protein (Fragment) n=1 Tax=S... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 35..49
score: 36.66
coord: 122..136
score: 34.98
coord: 76..90
score: 34.61
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 7..48
e-value: 100.0
score: 4.3
coord: 138..175
e-value: 3.9
score: 13.2
coord: 51..89
e-value: 6.8E-6
score: 35.6
coord: 95..135
e-value: 4.4E-7
score: 39.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 101..135
e-value: 1.3E-5
score: 25.9
coord: 53..89
e-value: 5.5E-5
score: 23.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 102..144
score: 13.55
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 64..98
score: 10.107
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..178
e-value: 2.2E-37
score: 130.6
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 21..175
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 76..90
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 122..136
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 57..182
score: 21.331
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 26..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7583contigE_fasciculatus_S2_contig7583:4588..6618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7583.15744.1mRNA_E_fasciculatus_S2_contig7583.15744.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7583 3595..7193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7583.15744.1 ID=prot_E_fasciculatus_S2_contig7583.15744.1|Name=mRNA_E_fasciculatus_S2_contig7583.15744.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=183bp
MADFRAHAQAVTGLAGPGGVGGPQAAAVVVPSSTLYSASLDRAVKTWDAE
RQDCLHTLNAPKAVTCLGCSESGRMLATGHPDARVRIWDTRTQGETITRA
SLSSHKQWVTDVKWAPGSETMVLSCGHDGAVKLWDIRSTLPLHSAQAHQG
KALCCGWQEGKIVSGGEDGAVKTYVVPERNHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep