prot_E_fasciculatus_S2_contig7533.15698.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7533.15698.1
Unique Nameprot_E_fasciculatus_S2_contig7533.15698.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length124
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 7.050e-71
Identity = 112/117 (95.73%), Postives = 114/117 (97.44%), Query Frame = 0
Query:    8 DHPHQAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            D   +AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL
Sbjct:    3 DGSFEAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 119          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 9.890e-55
Identity = 90/111 (81.08%), Postives = 99/111 (89.19%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV  QI YAT++GD  +CQA+S EL RYG K GLKNYAAAYCTGLL ARRLL+QL
Sbjct:    3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQL 113          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: K8YST5_NANGC (60s ribosomal protein l5 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YST5_NANGC)

HSP 1 Score: 176 bits (446), Expect = 4.410e-54
Identity = 87/114 (76.32%), Postives = 97/114 (85.09%), Query Frame = 0
Query:   11 HQAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            H  FVKV K K YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVRFTN+Y +AQI+YATI GD  +  A+S EL RYG KVGLKNYAAAYCTGLL+ARRLL +L
Sbjct:    6 HIPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKL 119          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: D0NSE8_PHYIT (60S ribosomal protein L5 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NSE8_PHYIT)

HSP 1 Score: 175 bits (443), Expect = 1.890e-53
Identity = 91/124 (73.39%), Postives = 98/124 (79.03%), Query Frame = 0
Query:    1 LLNLGTNDHPHQAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            LL  G        FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLI QDKNKYNSPKYRLVVR TNK V+ QI YA I GD  +CQA+S ELPRYG  VGLKNYAAAY TGLLV RR+L++L
Sbjct:    2 LLFFGNFHQVRMGFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQATSAELPRYGLTVGLKNYAAAYATGLLVGRRVLQKL 125          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A7S2C5V7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5V7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.980e-52
Identity = 88/111 (79.28%), Postives = 98/111 (88.29%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            FVKV K KAYFKRYQVKFRRRREGKTDYRARKRL+CQD+NKYN+PKYRLVVRF+NK  + QI+Y+ I GD  MC ASSTEL RYG KVGLKNYAAAYCTGLL ARRLL+++
Sbjct:    3 FVKVVKNKAYFKRYQVKFRRRREGKTDYRARKRLVCQDRNKYNTPKYRLVVRFSNKACICQIVYSEIVGDKVMCCASSTELGRYGLKVGLKNYAAAYCTGLLCARRLLKKI 113          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 9.550e-52
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQ 123
            FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ QI YA I GD  +CQASSTEL RYG  VGLKNYAAAYCTGLL ARRLL++
Sbjct:   21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQK 130          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A4D9DC45_9STRA (Ribosomal_L18_c domain-containing protein n=4 Tax=cellular organisms TaxID=131567 RepID=A0A4D9DC45_9STRA)

HSP 1 Score: 174 bits (442), Expect = 9.610e-52
Identity = 86/111 (77.48%), Postives = 96/111 (86.49%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            FVKV K K YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVRFTN+Y +AQI+YATI GD  +  A+S EL RYG KVGLKNYAAAYCTGLL+ARRLL +L
Sbjct:    3 FVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKL 113          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: B7TJH5_ARTSF (Ribosomal protein L5 (Fragment) n=1 Tax=Artemia franciscana TaxID=6661 RepID=B7TJH5_ARTSF)

HSP 1 Score: 167 bits (423), Expect = 1.580e-51
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLL 121
            FVKV K KAYFKR+QVKFRRRREGKTDY AR+RL+ QDKNKYN+PKYR+VVRFTNK ++ QI YA I+GDV +C A + ELPRYG KVGL NYAAAYCTGLL+ARRLL
Sbjct:    3 FVKVVKNKAYFKRFQVKFRRRREGKTDYYARRRLVIQDKNKYNTPKYRMVVRFTNKDIVCQIAYARIEGDVIVCAAYAHELPRYGIKVGLTNYAAAYCTGLLLARRLL 110          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A0A7S3XCV7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XCV7_9CHLO)

HSP 1 Score: 172 bits (437), Expect = 2.860e-51
Identity = 87/112 (77.68%), Postives = 96/112 (85.71%), Query Frame = 0
Query:   13 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            A +KV KTKAYFKRYQVKFRRRREGKTDYRAR RL+ QDKNKY +PKYRLV RF+NK VLAQ+  AT+ GDV +C ASS ELPRYG KVGL NYAAAYC GLLVARR+L+QL
Sbjct:    2 AVMKVTKTKAYFKRYQVKFRRRREGKTDYRARTRLVLQDKNKYGAPKYRLVARFSNKQVLAQVTKATLAGDVVVCSASSAELPRYGLKVGLTNYAAAYCVGLLVARRMLQQL 113          
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Match: A9NKC3_PICSI (Ribosomal_L18_c domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NKC3_PICSI)

HSP 1 Score: 172 bits (437), Expect = 3.270e-51
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 0
Query:   14 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQL 124
            FVK QKT+AYFKR+QVKF+RRREGKTDYRAR RLI QDKNKYN+PKYRLVVRF+NK V+AQIIYAT+ GDV M  A S ELPRYG +VGL NYAAAYCTGLL+ARR+L+QL
Sbjct:    3 FVKAQKTRAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRLVVRFSNKDVVAQIIYATLAGDVVMAAAYSRELPRYGLEVGLTNYAAAYCTGLLLARRVLKQL 113          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7533.15698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG3_9PHAE7.050e-7195.73Ribosomal_L18_c domain-containing protein n=2 Tax=... [more]
A0A836CBG0_9STRA9.890e-5581.08RL5, ribosomal protein 5 60S large ribosomal subun... [more]
K8YST5_NANGC4.410e-5476.3260s ribosomal protein l5 n=1 Tax=Nannochloropsis g... [more]
D0NSE8_PHYIT1.890e-5373.3960S ribosomal protein L5 n=1 Tax=Phytophthora infe... [more]
A0A7S2C5V7_9STRA1.980e-5279.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0BVS7_9STRA9.550e-5280.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A4D9DC45_9STRA9.610e-5277.48Ribosomal_L18_c domain-containing protein n=4 Tax=... [more]
B7TJH5_ARTSF1.580e-5176.85Ribosomal protein L5 (Fragment) n=1 Tax=Artemia fr... [more]
A0A7S3XCV7_9CHLO2.860e-5177.68Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A9NKC3_PICSI3.270e-5179.28Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPRINTSPR00058RIBOSOMALL5coord: 95..115
score: 81.55
coord: 54..73
score: 64.06
coord: 31..50
score: 81.88
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPFAMPF17144Ribosomal_L5ecoord: 25..123
e-value: 2.9E-52
score: 176.9
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPANTHERPTHR23410RIBOSOMAL PROTEIN L5-RELATEDcoord: 13..124
NoneNo IPR availableGENE3D3.30.420.550coord: 12..124
e-value: 2.8E-57
score: 196.3
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 22..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7533contigE_fasciculatus_S2_contig7533:330..701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7533.15698.1mRNA_E_fasciculatus_S2_contig7533.15698.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7533 330..701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7533.15698.1 ID=prot_E_fasciculatus_S2_contig7533.15698.1|Name=mRNA_E_fasciculatus_S2_contig7533.15698.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=124bp
LLNLGTNDHPHQAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQ
DKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDVCMCQASSTELPRYGCK
VGLKNYAAAYCTGLLVARRLLRQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005485Rbsml_L5_euk/L18_arc