prot_E_fasciculatus_S2_contig752.15682.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig752.15682.1
Unique Nameprot_E_fasciculatus_S2_contig752.15682.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length486
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig752.15682.1 vs. uniprot
Match: A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)

HSP 1 Score: 572 bits (1475), Expect = 6.470e-200
Identity = 401/487 (82.34%), Postives = 421/487 (86.45%), Query Frame = 0 
Query:    1 MQWSQRATPATTASVSTPSSAGKRERWWRVLASAKWEIGSEPRHQQTGTRLRPGRWLLSAWKRTA-QFRSNMRWGSLSYIATTWEEQSTTTDICSAAEGRAKVDPSTCSNN-EAVQGPEKAGGNDATNSAMVASFLRRRAPQGLAFALVAATAYVIYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRGVVERADDAKSGLAQRDDED--DKSAGSGQSLGGKEGEMDGRMDVGEEANRKGTSEHDEPGPTACPSPEHHREGNDGGKTTHGGVRKDGQQQGDVSSDRANQGGEQPGYSAEEQDPALARMSRGQSLLSESSTEDILAEADHLIADAANQSFNSIRATTTPTKPRPRKTRATSKATSPTRAARSTSRDSPRGASSPKPTLTRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALQRDPSALSEIAKDASLQQGG 483
            MQWS+RATPATTAS S PSSAGKRE W RVL SAKWE+GSEPR QQTGTRLR GRWLLSAW++TA QFRSNMRWGSLSYIA  WEEQSTTTDICSAA+GRAK D STCSNN EA+QGPE AGG DATN A+VASFLRRRAPQGLAFALV AT YV+Y XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         DTR V ERA+D + GLA+R DED   + A  G+S+GGKE EMDGRMDVGEE  RKGTSEHDEPGPTACPSPEH REGND GK TH GVR DGQQQ DVSSD A QGG QP +SAEEQD ALARMSRGQSLLSESSTEDILAEADHLIADAAN +FNSIRA TTPTKPR  K RATSKAT P +AAR  S+DSPRG  S K TL+RMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRAL+RDPSALSEIAKDASLQQGG
Sbjct:    1 MQWSKRATPATTASASKPSSAGKREGWSRVLESAKWELGSEPRDQQTGTRLRSGRWLLSAWRKTAHQFRSNMRWGSLSYIARAWEEQSTTTDICSAADGRAKADSSTCSNNNEAIQGPENAGGTDATNPAVVASFLRRRAPQGLAFALVVATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------DTRDVAERANDTRPGLAKRSDEDVDGEHAVGGKSVGGKEEEMDGRMDVGEEGTRKGTSEHDEPGPTACPSPEHDREGNDVGKVTHAGVRTDGQQQDDVSSDGAIQGGGQPSHSAEEQDSALARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGG 478
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BLAST of mRNA_E_fasciculatus_S2_contig752.15682.1 vs. uniprot
Match: D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.750e-24
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:  426 MTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALQRDPSALSEIAKDASLQQGG 483
            MTS SRSSDTRSPKRPRVYPEVSGEEVDALVSLT RAL+RDPSALSEIAKDASLQQGG
Sbjct:    1 MTSVSRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGG 58
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig752.15682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAH0_9PHAE6.470e-20082.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF2_ECTSI4.750e-2494.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..485
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig752contigE_fasciculatus_S2_contig752:16647..20116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig752.15682.1mRNA_E_fasciculatus_S2_contig752.15682.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig752 16481..21336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig752.15682.1 ID=prot_E_fasciculatus_S2_contig752.15682.1|Name=mRNA_E_fasciculatus_S2_contig752.15682.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=486bp
MQWSQRATPATTASVSTPSSAGKRERWWRVLASAKWEIGSEPRHQQTGTR
LRPGRWLLSAWKRTAQFRSNMRWGSLSYIATTWEEQSTTTDICSAAEGRA
KVDPSTCSNNEAVQGPEKAGGNDATNSAMVASFLRRRAPQGLAFALVAAT
AYVIYRRRHRRPGGRPRSRRQQSKRRSDVAVDAARKWWWQRAGGNGRKAE
GKDDGVGKSGGGGGVGGGGGGGDTRGVVERADDAKSGLAQRDDEDDKSAG
SGQSLGGKEGEMDGRMDVGEEANRKGTSEHDEPGPTACPSPEHHREGNDG
GKTTHGGVRKDGQQQGDVSSDRANQGGEQPGYSAEEQDPALARMSRGQSL
LSESSTEDILAEADHLIADAANQSFNSIRATTTPTKPRPRKTRATSKATS
PTRAARSTSRDSPRGASSPKPTLTRMTSASRSSDTRSPKRPRVYPEVSGE
EVDALVSLTHRALQRDPSALSEIAKDASLQQGGGN*
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