prot_E_fasciculatus_S2_contig7445.15620.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7445.15620.1
Unique Nameprot_E_fasciculatus_S2_contig7445.15620.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length112
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A6H5JHR7_9PHAE (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 1.990e-72
Identity = 105/110 (95.45%), Postives = 108/110 (98.18%), Query Frame = 0
Query:    2 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAPFLPSMAKKSSGFEEEEY 111
            PQLGTVAVPGGEQVF MKEPVAIVCPNDDLNIQMPNDEK EMLLVIDRANREFEFGKFFLWDTPS+GLVVRYFEGEPTPGFACVGRVG+VLAPFLPSMAKKSSGFEEE+Y
Sbjct:  122 PQLGTVAVPGGEQVFKMKEPVAIVCPNDDLNIQMPNDEKAEMLLVIDRANREFEFGKFFLWDTPSDGLVVRYFEGEPTPGFACVGRVGIVLAPFLPSMAKKSSGFEEEDY 231          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: D7G2G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G3_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.690e-59
Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0
Query:    2 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAPFLPSMAKK 102
            PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEM       NREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVG+VLAPFLPSM  +
Sbjct:   46 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEM-------NREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGIVLAPFLPSMTPR 139          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A836C9L5_9STRA (RuBisCo_chap_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.330e-31
Identity = 55/108 (50.93%), Postives = 76/108 (70.37%), Query Frame = 0
Query:    2 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAPFLPSMAKKSSGFEEE 109
            PQ+GTVA+PGG+ V ++ +PV IV  +D L I +P D  TE+L V+DRA  +F+ GKFF+W  P + +++R+F+ EP  G+ C+GRV  V  PFL  M K SSGFEEE
Sbjct:  115 PQMGTVALPGGDTVTDLIDPVIIVAASDSLGISLPQDATTEVLAVVDRAEVDFQEGKFFVWQAPDKSVIIRWFKQEPQ-GYQCLGRVVFVHVPFLDVMKKPSSGFEEE 221          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: D7G2G1_ECTSI (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G1_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.020e-20
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    2 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLL 45
            PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEM L
Sbjct:  117 PQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMHL 160          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A098TKN9_9CYAN (RuBisCO accumulation factor 1 n=1 Tax=Neosynechococcus sphagnicola sy1 TaxID=1497020 RepID=A0A098TKN9_9CYAN)

HSP 1 Score: 55.8 bits (133), Expect = 9.300e-7
Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAP 94
            VA+PG + + N  +PVA++C ++ L   +P   + E+LLV+DRA R++    +FL +   + L+V++F    TP    +GRV +V+ P
Sbjct:  254 VAIPGWQVILNAADPVALLCDSERLPTPLPGAAE-ELLLVVDRAERQWSNEGYFLSEQDDQ-LIVQWF--PETPMLPILGRVVLVMRP 337          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A2T2RST4_9CYAN (RuBisCO accumulation factor 1 n=1 Tax=Cyanobacteria bacterium QH_9_48_43 TaxID=1919126 RepID=A0A2T2RST4_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.280e-6
Identity = 28/88 (31.82%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAP 94
            V +PG + V N ++PV I+  +D   + +P   + E+L+++DRA R+++   +F+ D+  + L V++F     P    +GRV +VL P
Sbjct:  259 VPIPGWQVVLNAEDPVVILSSSDHFPVPLPGKPEQEVLILVDRAQRQWDADSYFISDSSGQ-LEVQWF--AEAPELPLLGRVILVLRP 343          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A8J6XHQ5_9CYAN (RuBisCO accumulation factor 1 n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J6XHQ5_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.280e-6
Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAP 94
            V +PG + + + ++PVAI+C +D L  Q P   +  +L+V+DRA R+++ G +F+ D  SE L  ++F  E  P    +GR+ V++ P
Sbjct:  261 VPLPGWQTLLSAEDPVAIMCNSDRLPTQTPTTPEP-VLVVVDRAQRQWDAGSYFVVDNSSE-LDFQWF--ETAPQVPILGRIIVIVRP 344          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: UPI00168564B3 (hypothetical protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI00168564B3)

HSP 1 Score: 54.3 bits (129), Expect = 3.240e-6
Identity = 30/88 (34.09%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAP 94
            + +PG + V   ++PVAI+   D L  +    ++ E+L+++DRA RE++   +FL D  S+ L +++FE EP      +GR+ +VL P
Sbjct:  253 IGIPGWQVVLAAEDPVAILADPDRLPAESSGKQE-EVLVIVDRAQREWQADSYFLVDRDSQ-LEIQWFENEPIEPI--LGRILIVLRP 336          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A7C3KFJ3_9CYAN (RuBisCO accumulation factor 1 n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KFJ3_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 4.450e-6
Identity = 32/88 (36.36%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAP 94
            VA+PG + + + ++PV  +  +D L   +P   + E+LLVIDRA RE+   ++FL +   E L V++F  E +P    +G+V +VL P
Sbjct:  260 VAIPGWQVILSAEDPVVALVQSDQLPTPLPGTPQ-EVLLVIDRAQREWAGDRYFLVEQ-GEQLTVQWF--EQSPNVPLLGQVVLVLRP 343          
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Match: A0A0M0SLE7_9CYAN (RuBisCO accumulation factor 1 n=5 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0M0SLE7_9CYAN)

HSP 1 Score: 53.1 bits (126), Expect = 8.320e-6
Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    7 VAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRANREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVL 92
            V +PG + + + ++PV I+C +D L  Q  N+ +  M+ VIDRA RE+  G +F+ D   E L  ++F  E TP    +GR+ V++
Sbjct:  262 VPLPGWQTILSAEDPVVILCNSDRLPTQTQNNPEPVMV-VIDRAQREWNSGSYFVVDNSGE-LDFQWF--ETTPEVTLLGRILVIV 343          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7445.15620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JHR7_9PHAE1.990e-7295.45RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
D7G2G3_ECTSI7.690e-5989.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9L5_9STRA7.330e-3150.93RuBisCo_chap_C domain-containing protein n=1 Tax=T... [more]
D7G2G1_ECTSI1.020e-2097.73RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
A0A098TKN9_9CYAN9.300e-735.23RuBisCO accumulation factor 1 n=1 Tax=Neosynechoco... [more]
A0A2T2RST4_9CYAN1.280e-631.82RuBisCO accumulation factor 1 n=1 Tax=Cyanobacteri... [more]
A0A8J6XHQ5_9CYAN1.280e-635.23RuBisCO accumulation factor 1 n=1 Tax=Iningainema ... [more]
UPI00168564B33.240e-634.09hypothetical protein n=1 Tax=Microcoleus sp. FACHB... [more]
A0A7C3KFJ3_9CYAN4.450e-636.36RuBisCO accumulation factor 1 n=1 Tax=Oscillatoria... [more]
A0A0M0SLE7_9CYAN8.320e-636.05RuBisCO accumulation factor 1 n=5 Tax=Hapalosiphon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 6..94
e-value: 2.8E-13
score: 49.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7445contigE_fasciculatus_S2_contig7445:6691..7550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7445.15620.1mRNA_E_fasciculatus_S2_contig7445.15620.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7445 6691..7556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7445.15620.1 ID=prot_E_fasciculatus_S2_contig7445.15620.1|Name=mRNA_E_fasciculatus_S2_contig7445.15620.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=112bp
MPQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEMLLVIDRA
NREFEFGKFFLWDTPSEGLVVRYFEGEPTPGFACVGRVGVVLAPFLPSMA
KKSSGFEEEEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040858Raf1_C