prot_E_fasciculatus_S2_contig742.15594.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig742.15594.1
Unique Name	prot_E_fasciculatus_S2_contig742.15594.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	607

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig742.15594.1 vs. uniprot
Match: D7G5A5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5A5_ECTSI)

HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0
Identity = 555/607 (91.43%), Postives = 571/607 (94.07%), Query Frame = 0

Query:    1 MGMKQRKARLGQMAAMCRLASKGTDEDIAELRGILDHIAAEKDRDAGLFSPRASVACSRQAARTYGEFVCTLEGSASKGKGEVIMLTRDSDFGRISGFLQEAFNLTGSVLITLPEDRLFDEMEQLLLSTKHLQGLIDDFVLRQPTRRVLKVMKATFPITRCLVGGSHGDLDADEATALALNQLLELVQVPANLETVDRAGRLSELLVAVGAVVGHSLSSVQVAVACQVVWKLATLTDMRRRMLEHGLLNKLWALAESIARTVETPEHRKARQKIAAAAGTAXXXXXXXXXXXXXX-----GSLLPQEVTGDNEDEAHTSEGEEGGGVAVVLEAGQELDEVAAKCVGAISLMLRSQEAADSLAGSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQVIVTPAEAIKVLEQASPACQRCLDQLESTMIAVDPKSTTAATASGTRALAGVYPPLHPSMDAETQDAMGILEQATAACWGSLAVIDRCPPGPEKKAISSACWFRTMLAVGKLAGSKWLSPWVVFCAVACIGVGXXXXASVDTDSSKEVGNSISAT 602
            MGMKQRKARLGQMAA+CRLASKGTD+DIAELRGILDHIAAEK+RDAGLFSPRASVACSRQAARTYGEFVCTLEGSASKG+GEVIMLTRDSDFGRISGFLQEAFNLTG VLITLPEDRLFDEMEQL+LSTKHLQGLIDDFVLRQP RRVLKVMKATFPITRCLVGGSHGDLDADEA  +ALNQLLELVQVPANLETVDRAGRLSELLVAVG+V+GHS SSVQVAVACQVVWKLAT TDMRRRMLEHGL NKLWALAESIARTVETPEHRKARQK        XXXXXXXXXX         G LL QEVTG NEDEAHTS GEEGGGVAVVLEAGQE+DEVAAKCVGAISLMLRSQEAADSL+GSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQ+ VTPAEAIKVLEQASPACQRCLDQLESTM+ VDPKST AATASGTRALAGV  PLH SMDAETQD+MGILEQATAACWGSLAVIDRCPPGP KKA+SSACWFRTML+V KLAGSKWLSPWVVFCAVACIGVGXXXXASVDTDSS+EVGNSISAT
Sbjct:    1 MGMKQRKARLGQMAALCRLASKGTDQDIAELRGILDHIAAEKERDAGLFSPRASVACSRQAARTYGEFVCTLEGSASKGQGEVIMLTRDSDFGRISGFLQEAFNLTGGVLITLPEDRLFDEMEQLVLSTKHLQGLIDDFVLRQPPRRVLKVMKATFPITRCLVGGSHGDLDADEAIVVALNQLLELVQVPANLETVDRAGRLSELLVAVGSVIGHSSSSVQVAVACQVVWKLATSTDMRRRMLEHGLQNKLWALAESIARTVETPEHRKARQKAXXXXXXXXXXXXXXXXXVDGSRGGEGGPLLLQEVTGGNEDEAHTSGGEEGGGVAVVLEAGQEMDEVAAKCVGAISLMLRSQEAADSLSGSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQIAVTPAEAIKVLEQASPACQRCLDQLESTMLPVDPKSTAAATASGTRALAGVCSPLHQSMDAETQDSMGILEQATAACWGSLAVIDRCPPGPGKKAVSSACWFRTMLSVAKLAGSKWLSPWVVFCAVACIGVGXXXXASVDTDSSEEVGNSISAT 607

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BLAST of mRNA_E_fasciculatus_S2_contig742.15594.1 vs. uniprot
Match: A0A6H5LAC6_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAC6_9PHAE)

HSP 1 Score: 578 bits (1491), Expect = 1.100e-185
Identity = 348/526 (66.16%), Postives = 360/526 (68.44%), Query Frame = 0

Query:   75 SASKGKGEVIMLTRDSDFGRISGFLQEAFNLTGSVLITLPEDRLFDEMEQLLLSTKHLQGLIDDFVLRQPTRRVLKVMKATFPITRCLVGGSHGDLDADEATALALNQLLELVQVPANLETVDRAGRLSELLVAVGAVVGHSLSSVQVAVACQVVWKLATLTDMRRRMLEHGLLNKLWALAESIARTVETPEHRKARQKIAAAAGTAXXXXXXXXXXXXXXGS-----LLPQEVTGDNEDEAHTSEGEEGGGVAVVLEAGQELDEVAAKCVGAISLMLRSQEAADSLAGSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQVIVTPAEAIKVLEQASPACQRCLDQLESTMIAVDPKSTTAATASGTRALAGVYPPLHPSMDAETQDAMGILEQATAACWGSLAVIDRCPPGPEKKAISSACWFRTMLAVGKLAGSKWLSPWVVFCAVACIGVGXXXXASVDTDSSKEV 595
            SASKG+GEVIMLTRDSDFGRISGFL+EAFNLTG VLITLPEDRLFDEMEQL+LSTKHLQGLID FVLRQ  RRVLK                                                                                                  NKLWALAESIARTVETPE+RKARQK        XXXX                 LL QEVTGDNEDEAHTSEGEEGGGVAVVLEAGQELDEVAAKC+GAISLMLRSQEAADSLAGSEGYHNGLEILLELATAGQR GGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILN+FLRGEPSQ+ VTPAEAIKVLEQA+PACQRCLDQLES M+ +DPKST AATASGTRALAGV PPLH                             RCPPGPEKKAISSACWF TML+V KLAGSKWLSPWVVFCAVACIGV XXXXASVDTDS+KEV
Sbjct:    6 SASKGQGEVIMLTRDSDFGRISGFLREAFNLTGGVLITLPEDRLFDEMEQLVLSTKHLQGLIDAFVLRQSPRRVLK--------------------------------------------------------------------------------------------------NKLWALAESIARTVETPENRKARQKXXXXXXXXXXXXTGGSRGADDSRGGEGVPLLLQEVTGDNEDEAHTSEGEEGGGVAVVLEAGQELDEVAAKCLGAISLMLRSQEAADSLAGSEGYHNGLEILLELATAGQRGGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNSFLRGEPSQIAVTPAEAIKVLEQAAPACQRCLDQLESKMLPIDPKSTAAATASGTRALAGVCPPLH----------------------------QRCPPGPEKKAISSACWFSTMLSVAKLAGSKWLSPWVVFCAVACIGVXXXXXASVDTDSNKEV 405

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig742.15594.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig742.15594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G5A5_ECTSI	0.000e+0	91.43	Flagellar associated protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5LAC6_9PHAE	1.100e-185	66.16	Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 131...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 307..477 e-value: 1.3E-6 score: 29.8
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 588..606
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 568..587
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..567
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 174..457

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig742	contig	E_fasciculatus_S2_contig742:14944..20054 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig742.15594.1	mRNA_E_fasciculatus_S2_contig742.15594.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig742 14944..28105 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig742.15594.1 ID=prot_E_fasciculatus_S2_contig742.15594.1|Name=mRNA_E_fasciculatus_S2_contig742.15594.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=607bp
MGMKQRKARLGQMAAMCRLASKGTDEDIAELRGILDHIAAEKDRDAGLFS
PRASVACSRQAARTYGEFVCTLEGSASKGKGEVIMLTRDSDFGRISGFLQ
EAFNLTGSVLITLPEDRLFDEMEQLLLSTKHLQGLIDDFVLRQPTRRVLK
VMKATFPITRCLVGGSHGDLDADEATALALNQLLELVQVPANLETVDRAG
RLSELLVAVGAVVGHSLSSVQVAVACQVVWKLATLTDMRRRMLEHGLLNK
LWALAESIARTVETPEHRKARQKIAAAAGTAGGLRGADGSRGGEGGSLLP
QEVTGDNEDEAHTSEGEEGGGVAVVLEAGQELDEVAAKCVGAISLMLRSQ
EAADSLAGSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLI
SHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQVIV
TPAEAIKVLEQASPACQRCLDQLESTMIAVDPKSTTAATASGTRALAGVY
PPLHPSMDAETQDAMGILEQATAACWGSLAVIDRCPPGPEKKAISSACWF
RTMLAVGKLAGSKWLSPWVVFCAVACIGVGVGTGASVDTDSSKEVGNSIS
ATVILC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like