prot_E_fasciculatus_S2_contig730.15493.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig730.15493.1
Unique Nameprot_E_fasciculatus_S2_contig730.15493.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length566
Homology
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: D7FQ33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ33_ECTSI)

HSP 1 Score: 895 bits (2312), Expect = 0.000e+0
Identity = 496/565 (87.79%), Postives = 508/565 (89.91%), Query Frame = 0
Query:    1 MVGASSSESLSDEFNVSNPPPQPTGLPGQANRDGVPIVARVPEGGGGSRAASMLRREQQAGFTVFSNPGAREHVCRSTAVLPRQDGGAQERPVATGDTSIDETKEEHSTRARSDQHWISALALPRPVSSPAAQEVVEEVNSSRRTAERETSESQGVGMAGSAAAEQHLPVDIGIGGTLEAAPTGLAALRALGSDSTQSLDSGPRLGRESGSIQASQHGMEEGTGGGAASSTREANPGETFGRGDVALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAPDNSPLLTTTPSVPDGAPPPAPNAPRPAAAQEGPTASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGAGDAAGRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTPATTAPPHEVA 565
            M GASSS +L DEF+VS PP QP G PG ANRDG PIVARVPEGGGGSRAASMLRREQQAG T FSNP A EH+CRSTAVLPRQDGGAQE  VATGD SIDET EEHSTR RS QH  SALALPRPVSSPAAQE+VEEVNSSRRTAERETSES GVGMAGSA A QHLP DI IGGT+EAAPT LAALR LGSD T SLDSGPRL RE+GS +AS  GM EGTG GAASSTREAN GET GRGD+ALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAP NSP+LTTT SVPDGAPPPAPNAPRPAA +EG  ASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGG A D AGR SD  GRCCSKETIAALPD   PVEGAVG+V  GGVR CVICLSE+DTAGQ LCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGST ATTAPPHEVA
Sbjct:    1 MAGASSS-ALPDEFSVSTPPSQPIGPPGHANRDGAPIVARVPEGGGGSRAASMLRREQQAGLTTFSNPEAGEHLCRSTAVLPRQDGGAQESSVATGDASIDETNEEHSTRTRSGQHLTSALALPRPVSSPAAQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIDIGGTMEAAPTDLAALRTLGSDRTPSLDSGPRLVREAGSRRASPRGM-EGTGSGAASSTREANAGETSGRGDMALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAPGNSPVLTTTSSVPDGAPPPAPNAPRPAAVREGQAASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGEASDTAGRRSDYTGRCCSKETIAALPDASQPVEGAVGEVDGGGVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATTAPPHEVA 563          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: A0A6H5JE11_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE11_9PHAE)

HSP 1 Score: 863 bits (2229), Expect = 3.060e-308
Identity = 482/565 (85.31%), Postives = 493/565 (87.26%), Query Frame = 0
Query:    1 MVGASSSESLSDEFNVSNPPPQPTGLPGQANRDGVPIVARVPEGGGGSRAASMLRREQQAGFTVFSNPGAREHVCRSTAVLPRQDGGAQERPVATGDTSIDETKEEHSTRARSDQHWISALALPRPVSSPAAQEVVEEVNSSRRTAERETSESQGVGMAGSAAAEQHLPVDIGIGGTLEAAPTGLAALRALGSDSTQSLDSGPRLGRESGSIQASQHGMEEGTGGGAASSTREANPGETFGRGDVALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQSAPDNSPLLTTTPSVPDGAPPPAPNAPRPAAAQEGPTASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGAGDAAGRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTPATTAPPHEVA 565
            MVGASSSES  DEFNVS PPPQP G P  ANRDG PIVARVPEGGGGSRAA MLRREQQAG T FSNP A EH+CRS AVLPRQDGGAQE  VATGDTSIDET EEHSTR RS QH  SALALPRPVSSPA QE+VEEVNSSRRTAERETSES GVGMAGSA A QHLP DIGIGGT+EAAPT LAALR LGSD T SL+S PR  RE+GS +AS  GM EGTG GAASSTRE   GET GRG+VALPVREL    NGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAA ALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQ AP NSP+LTTT SV DG PPPAPN PRP A +EG  ASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGG  D  GRGSD  GRCCSKETIAALPD   PVEGAVG+V  G VR CVICLSE+DTAGQ LCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGST ATTAPPHEVA
Sbjct:  236 MVGASSSESPRDEFNVSTPPPQPMGPPRYANRDGAPIVARVPEGGGGSRAAIMLRREQQAGLTAFSNPEAGEHLCRSPAVLPRQDGGAQEGSVATGDTSIDETNEEHSTRTRSGQHLTSALALPRPVSSPAVQELVEEVNSSRRTAERETSESHGVGMAGSATAGQHLPADIGIGGTMEAAPTDLAALRMLGSDRTTSLNSVPRSVREAGSRRASPRGM-EGTGSGAASSTRETYAGETSGRGNVALPVREL----NGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAAALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQLAPGNSPVLTTTSSVSDGTPPPAPNTPRPTAVREGQVASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGTSDTVGRGSDYTGRCCSKETIAALPDASQPVEGAVGEVDGGDVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGSTLATTAPPHEVA 795          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: UPI001CF950E3 (E3 ubiquitin-protein ligase SGR9, amyloplastic n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF950E3)

HSP 1 Score: 69.3 bits (168), Expect = 2.020e-9
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  476 IAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            +AA P V + +     QV SGG   CVIC  E +  G+D+C+LPC H+FH +C+  WL  +++CP CR Q+P  ++
Sbjct:  178 VAAAPAVVVALPSV--QVSSGGAVECVICKEEMNK-GRDVCKLPCEHLFHWMCILPWLRKRNTCPCCRFQLPTDDV 250          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: UPI0005C94AB1 (E3 ubiquitin-protein ligase SGR9, amyloplastic n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C94AB1)

HSP 1 Score: 69.7 bits (169), Expect = 2.550e-9
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:  472 SKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            SK  + ALP V         +V SGG + CVIC  E     +D+C LPC H+FH VC+ +WLS +++CP CR  +P  ++
Sbjct:  222 SKAVVVALPSV---------EVKSGGTKECVICKEEM-AENRDVCELPCRHLFHWVCILRWLSKRNTCPCCRFGLPTDDV 291          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: A0A2K3KC51_TRIPR (Zinc finger family protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KC51_TRIPR)

HSP 1 Score: 64.7 bits (156), Expect = 3.810e-9
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0
Query:  463 GSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            G +V     S  T+ +LP V + V G          R CVIC  E    G+D+C+LPC H+FH +C+  WL  +++CP CR ++P+ ++
Sbjct:   16 GKEVKEVAASAATVVSLPAVVVSVGG----------RECVICKDEM-RVGRDVCQLPCQHLFHWMCILPWLGNKNTCPCCRFRLPSDDV 93          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: A0A5A7QEX3_STRAF (RING/U-box superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QEX3_STRAF)

HSP 1 Score: 66.2 bits (160), Expect = 3.910e-9
Identity = 27/63 (42.86%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  489 AVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            A+  V + G   C IC  E   AG+++C LPC H+FH +CV +WL  +D+CP CRR++P+ ++
Sbjct:   79 ALPSVAADGGGECAICREEMG-AGREVCELPCGHLFHWICVLRWLGRRDTCPCCRRRLPSDDV 140          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: A0A2Z6NN72_TRISU (RING-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NN72_TRISU)

HSP 1 Score: 65.1 bits (157), Expect = 5.730e-9
Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0
Query:  463 GSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            G +V     S  T+ +LP V + V G          R CVIC  E    G+D+C LPC H+FH +C+  WL  +++CP CR ++P+ ++
Sbjct:   40 GKEVKEVAASAATVVSLPAVEVSVGG----------RECVICKEEM-RVGRDVCELPCQHLFHWMCILPWLGKRNTCPCCRFRLPSDDV 117          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: UPI001263AEFB (E3 ubiquitin-protein ligase SGR9, amyloplastic-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263AEFB)

HSP 1 Score: 67.8 bits (164), Expect = 7.070e-9
Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0
Query:  442 SRMQGYLADLAGGGAGDAAGRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            +R + +L+ + GGG       G +VA    +  T+ ALP V         QV  GG   CVIC  E +  G+D+C+LPC H+FH +C+  WL  +++CP CR ++P  ++
Sbjct:  161 TRCRRFLSVMGGGGK-----AGREVA---AASATVVALPSV---------QVSGGGGLECVICKEEINE-GRDVCKLPCEHLFHWMCILPWLRKRNTCPCCRYRLPTDDV 252          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: A0A1S3Z0L1_TOBAC (E3 ubiquitin-protein ligase SGR9, amyloplastic-like n=6 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z0L1_TOBAC)

HSP 1 Score: 68.2 bits (165), Expect = 7.420e-9
Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 0
Query:  461 GRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            G G D      S   + ALP V         +V SG  R CVIC  E    G+D+C+LPC+H+FH  C+  WL   ++CP CR Q+P+ ++
Sbjct:  203 GEGKDSKKLATSVAVVVALPSV---------EVLSGSERECVICKEEM-REGRDVCKLPCDHIFHWKCILPWLKKMNTCPCCRFQLPSDDV 283          
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Match: UPI000C1CEC5D (E3 ubiquitin-protein ligase SGR9, amyloplastic n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CEC5D)

HSP 1 Score: 68.9 bits (167), Expect = 7.580e-9
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0
Query:  455 GAGDAAGRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRACVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEI 551
            G GD    G +VA    S   + ALP V +          SGG R CVIC  E    G+D+C LPCNH+FH +C+  WL  +++CP CR ++P  ++
Sbjct:  270 GGGDEGKDGREVA---TSVAAVVALPSVEV----------SGGGRECVICKEEM-IKGRDVCELPCNHLFHWMCILPWLKKRNTCPCCRSRLPTNDV 352          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig730.15493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ33_ECTSI0.000e+087.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JE11_9PHAE3.060e-30885.31RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI001CF950E32.020e-942.11E3 ubiquitin-protein ligase SGR9, amyloplastic n=1... [more]
UPI0005C94AB12.550e-941.25E3 ubiquitin-protein ligase SGR9, amyloplastic n=1... [more]
A0A2K3KC51_TRIPR3.810e-935.96Zinc finger family protein (Fragment) n=1 Tax=Trif... [more]
A0A5A7QEX3_STRAF3.910e-942.86RING/U-box superfamily protein n=1 Tax=Striga asia... [more]
A0A2Z6NN72_TRISU5.730e-935.96RING-type domain-containing protein n=1 Tax=Trifol... [more]
UPI001263AEFB7.070e-935.45E3 ubiquitin-protein ligase SGR9, amyloplastic-lik... [more]
A0A1S3Z0L1_TOBAC7.420e-938.46E3 ubiquitin-protein ligase SGR9, amyloplastic-lik... [more]
UPI000C1CEC5D7.580e-939.18E3 ubiquitin-protein ligase SGR9, amyloplastic n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 501..542
e-value: 1.3E-7
score: 41.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 500..543
e-value: 3.5E-11
score: 43.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 501..543
score: 12.371
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 493..556
e-value: 2.5E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR15710:SF30LD47007Pcoord: 332..550
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 332..550
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 500..548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig730contigE_fasciculatus_S2_contig730:14981..16678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig730.15493.1mRNA_E_fasciculatus_S2_contig730.15493.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig730 14929..17197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig730.15493.1 ID=prot_E_fasciculatus_S2_contig730.15493.1|Name=mRNA_E_fasciculatus_S2_contig730.15493.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=566bp
MVGASSSESLSDEFNVSNPPPQPTGLPGQANRDGVPIVARVPEGGGGSRA
ASMLRREQQAGFTVFSNPGAREHVCRSTAVLPRQDGGAQERPVATGDTSI
DETKEEHSTRARSDQHWISALALPRPVSSPAAQEVVEEVNSSRRTAERET
SESQGVGMAGSAAAEQHLPVDIGIGGTLEAAPTGLAALRALGSDSTQSLD
SGPRLGRESGSIQASQHGMEEGTGGGAASSTREANPGETFGRGDVALPVR
ELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVS
TLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVP
AATAAQSAPDNSPLLTTTPSVPDGAPPPAPNAPRPAAAQEGPTASGSAGT
YSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLAD
LAGGGAGDAAGRGSDVAGRCCSKETIAALPDVPLPVEGAVGQVGSGGVRA
CVICLSESDTAGQDLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVE
IGSTPATTAPPHEVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING