prot_E_fasciculatus_S2_contig7280.15475.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7280.15475.1
Unique Nameprot_E_fasciculatus_S2_contig7280.15475.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length280
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 9.760e-130
Identity = 205/243 (84.36%), Postives = 215/243 (88.48%), Query Frame = 0
Query:    1 MATEEAKVVDAVPPPPAYYKLFSPGAAIGAGLTTEEGGAXXXXXXPGDSAGGAGGMAPNGFPLQPPRPPGPGETYKMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEGAFSCLGLQENGVSGVGEGEGERARLGPVEMDVDESMGGGATTGVG 243
            MATEEAKVVDAVPPPPAYYKLFSPGA+    LT ++ GA      PGDSAGGAGG APN FPLQPPRPPGPGETY+MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRA LKGLLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQA END VMS LEAAM QCTSAQE AFSCLGLQE+G S V EGE ERA+ G VEMD+DE++GG ATT VG
Sbjct:    1 MATEEAKVVDAVPPPPAYYKLFSPGAS----LTGQDVGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCLGLQEHGASCVAEGERERAQQGRVEMDIDETIGGAATTAVG 239          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 8.380e-119
Identity = 187/203 (92.12%), Postives = 191/203 (94.09%), Query Frame = 0
Query:   77 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEGAFSCLGLQENGVSGVGEGEGERARLGPVEMDVDESMGGGATTGVGEGGVVGKGVAASEFGKAGKGKLGAVLAPDVESGNAR 279
            MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQA END VMSALEAAM QCTSAQEGAFSCLGLQENG SGV EGEGERAR G VEMDVDE++GG ATT VGEGGV G+GVAASEFGKAGKGKLGAVLAP VESGN R
Sbjct:    1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAVESGNPR 203          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.780e-23
Identity = 69/196 (35.20%), Postives = 101/196 (51.53%), Query Frame = 0
Query:    4 EEAKVVDAVPPPPAYYKLFSPGAAIGAGLTTEEGGAXXXXXXPGDSAGGAGGMAPNGFPLQPPRPPGPGETYKMFGMPYSSEPVEQELLPPEKIVVPASGQAI-DFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEG 198
            +E +VV A+P PP Y+K F                                      F L+  RPP P  +Y  FG+PYS+E     L+P EK + P       +FR+E++ LL SIMANY Q +++L+  PS+   K+ ++E LFVNFHS+LN++R HQAR +VL RL+ Q  +  + ++ LE+ M       EG
Sbjct:    3 DELQVVSALPAPPDYFKRFED----------------------------------ENFQLK--RPPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQMEAVRQVVEG 162          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: H3GJZ4_PHYRM (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJZ4_PHYRM)

HSP 1 Score: 96.3 bits (238), Expect = 3.650e-19
Identity = 50/118 (42.37%), Postives = 79/118 (66.95%), Query Frame = 0
Query:   66 PRPPGPGE-TYKMFGMPYSSEPVEQELLPPEKIVVPASGQA-----IDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANE 177
            P PP P E TY MFG PYS++ V  +LLP +K+  PA  +      +D++AE+K +  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q  E
Sbjct:  174 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPGKKLYAPAGEEGDEDAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINSFRPHQARETVIQMLKTQVQE 291          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.470e-18
Identity = 54/147 (36.73%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   66 PRPPGP-GETYKMFGMPYSSEPVEQELLPPEKIVVPASG--------QAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEGAFSCL 203
            P PP P    Y MFG PYS++ V  +LLP +   +  S         QAID++A+LK L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR ++++ LR Q  E    ++ +   +++     E A S L
Sbjct:   34 PAPPAPMAPNYHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIESREQVERAHSAL 180          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A329SFW2_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFW2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.270e-18
Identity = 50/119 (42.02%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   66 PRPPGPGE-TYKMFGMPYSSEPVEQELLPP--EKIVVP----ASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANE 177
            P PP P E TY MFG PYS++ V  +LLP   +K+  P      G  +D++AE+K +  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q  E
Sbjct:   34 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPGKKLYAPQGEDGGGAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 152          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A8K1CA38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA38_PYTOL)

HSP 1 Score: 91.7 bits (226), Expect = 3.040e-18
Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = 0
Query:    2 ATEEA-KVVDAVPPPPAYYKLFSPGAAIGAGLTTEEGGAXXXXXXPGDSAGGAGGMAPNGFPLQPPRPPGPGETYKMFGMPYSSEPVEQELLPPE--------KIVVPA-SGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDE 180
            A E+A ++V A P PPA++ L++ G   G                                   PP P     TY MFG PYS++ V  +LLP          K  VP  S + ID++A++K + +S++AN+ + +++L+  PS  +EKL+D+E LF+N H+L+N +R HQAR  ++  L++Q NE  E
Sbjct:   14 APEDAPEIVSAFPAPPAFFVLYADGVESG-----------------------------------PPPPETMEPTYHMFGTPYSTKDVVPDLLPQPGKKLYLDGKDSVPGESSEVIDYKAQMKKINHSLLANFTELVDVLIKKPSLFNEKLADLELLFLNMHNLINAFRPHQARETIIHMLKTQINERRE 167          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A2P4YE96_9STRA (Mediator of RNA polymerase II transcription subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE96_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.200e-17
Identity = 48/114 (42.11%), Postives = 77/114 (67.54%), Query Frame = 0
Query:   66 PRPPGPGE-TYKMFGMPYSSEPVEQELLP-PEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANE 177
            P PP P E TY MFG PYS++ V  +LLP P++ +       +D++AE+K +  S++AN+ + +++L+  P+  +EKL DVE LF+N H+L+N +R HQAR  V++ L++Q  E
Sbjct:  585 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPDRKLYAQGDDPVDYKAEMKKINRSLLANFVELVDILIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 698          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A024GGG9_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGG9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.420e-17
Identity = 54/147 (36.73%), Postives = 85/147 (57.82%), Query Frame = 0
Query:   66 PRPPGP-GETYKMFGMPYSSEPVEQELLPPE--KIVVPASG------QAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEGAFSCL 203
            P PP P    Y MFG PYS++ +  +LLP +  K+ +P         Q+ID++A+LK L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR  ++  L+SQ  E    +S     + +     E A S L
Sbjct:   57 PLPPAPMAPNYHMFGTPYSTKDIVPDLLPDDSKKLYLPTLSTQDPKEQSIDYKAQLKKLNRSLLANCIQLLDVLIRNPKLFNEKVDDLELLFVNMHNLINKFRPHQAREHIILMLQSQIEEKQAAISDFRRVLEESREQVERAHSAL 203          
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Match: A0A225WFP8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFP8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.610e-16
Identity = 42/104 (40.38%), Postives = 70/104 (67.31%), Query Frame = 0
Query:   75 YKMFGMPYSSEPVEQELLP-PEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQANE 177
            Y MFG PYS++ V  +LLP  EK +   + + + ++AE+K +  S++AN+ + +++LV  P+  + KL DVE LF+N H+L+N +R HQAR  V++ L++Q  E
Sbjct:    5 YHMFGSPYSTQDVVPDLLPHAEKKLYAKNDETVHYKAEMKKINRSLLANFVELVDVLVKKPAMFNAKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7280.15475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU59_9PHAE9.760e-13084.36Mediator of RNA polymerase II transcription subuni... [more]
D8LAU4_ECTSI8.380e-11992.12Mediator of RNA polymerase II transcription subuni... [more]
A0A6U1QAX8_9STRA1.780e-2335.20Mediator of RNA polymerase II transcription subuni... [more]
H3GJZ4_PHYRM3.650e-1942.37Mediator of RNA polymerase II transcription subuni... [more]
F0WF41_9STRA1.470e-1836.73Mediator of RNA polymerase II transcription subuni... [more]
A0A329SFW2_9STRA2.270e-1842.02Mediator of RNA polymerase II transcription subuni... [more]
A0A8K1CA38_PYTOL3.040e-1832.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YE96_9STRA1.200e-1742.11Mediator of RNA polymerase II transcription subuni... [more]
A0A024GGG9_9STRA5.420e-1736.73Mediator of RNA polymerase II transcription subuni... [more]
A0A225WFP8_9STRA3.610e-1640.38Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
NoneNo IPR availablePANTHERPTHR21428FAMILY NOT NAMEDcoord: 4..204
IPR009244Mediator complex, subunit Med7PFAMPF05983Med7coord: 12..193
e-value: 4.1E-31
score: 108.6
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 106..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7280contigE_fasciculatus_S2_contig7280:77..2896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7280.15475.1mRNA_E_fasciculatus_S2_contig7280.15475.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7280 77..2896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7280.15475.1 ID=prot_E_fasciculatus_S2_contig7280.15475.1|Name=mRNA_E_fasciculatus_S2_contig7280.15475.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=280bp
MATEEAKVVDAVPPPPAYYKLFSPGAAIGAGLTTEEGGASAATAAPGDSA
GGAGGMAPNGFPLQPPRPPGPGETYKMFGMPYSSEPVEQELLPPEKIVVP
ASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVN
FHSLLNRYRAHQARHIVLERLRSQANENDEVMSALEAAMLQCTSAQEGAF
SCLGLQENGVSGVGEGEGERARLGPVEMDVDESMGGGATTGVGEGGVVGK
GVAASEFGKAGKGKLGAVLAPDVESGNAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037212Med7/Med21-like
IPR009244Mediatior_Med7