prot_E_fasciculatus_S2_contig728.15473.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig728.15473.1
Unique Nameprot_E_fasciculatus_S2_contig728.15473.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length444
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig728.15473.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 1.130e-217
Identity = 400/443 (90.29%), Postives = 410/443 (92.55%), Query Frame = 0 
Query:    1 MVRRHRNRTVXXXXXXXXXXXXXXXXXXXXXXXXFGGGVAMASPGDQARRIKEEATALHRAGQYEEAAEEFARAAQVLEEAGVGLAPPPALSAIRLSLAASQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAGAAGSRLAQRAYRDAYLSVELSHDGGAAGPAAGDEKALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASMTPAARSSPAGSGGMFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMDMMGAGTGXXXXGAEEGXXXXXXXLMGGGGAKSALGNGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCSLLNQAKPETLMSLATTAGFPGANEAMVTKLSGYLQKADGKTLESWIDYGEIATCAYRRLKQMAVLWSRGIALAGIWLVWVWVRACFAPIVVQGA 443
            MVRR+R+RTV XXXXXXXXXXXXXXXXXXXX   FGGGVAMASPGDQARRIKEEATALHRAGQYEEAAEEFARAAQ+LEEAGVGLAPPPALSAIRLSLAASQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAGAAGSRLAQRAYRDAYLSVELS+DGGAAGPAAGD KALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASM P ARS+PAGSGG+FD     XXXXXXXXXXX XXXXXXXX XXX    LMDMMGAGTGXXXX     XXXXXXXLMG   AKS LG GADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVC+ LNQAKPETLMSLATTAGFPGANEA+V  LSGYLQKADGKTLESWIDYGEIATCA+RRLKQ +VLWSRGIALAGIWLVWVWVRACFAPIVVQ A
Sbjct:    1 MVRRYRHRTVVXXXXXXXXXXXXXXXXXXXX---FGGGVAMASPGDQARRIKEEATALHRAGQYEEAAEEFARAAQLLEEAGVGLAPPPALSAIRLSLAASQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAGAAGSRLAQRAYRDAYLSVELSNDGGAAGPAAGDAKALGLMAEMEAGDWGQGWLTEADRSAARSKADKHLTALASMAPPARSTPAGSGGLFDMFGGGXXXXXXXXXXXGXXXXXXXXLXXXPG--LMDMMGAGTGXXXXXXXXXXXXXXXXLMGXXXAKSGLGGGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig728.15473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD29_ECTSI1.130e-21790.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..411
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 432..443
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 412..431
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.705
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 418..440
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 42..171
e-value: 4.8E-10
score: 41.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 48..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig728contigE_fasciculatus_S2_contig728:9904..15761 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig728.15473.1mRNA_E_fasciculatus_S2_contig728.15473.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig728 9816..15786 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig728.15473.1 ID=prot_E_fasciculatus_S2_contig728.15473.1|Name=mRNA_E_fasciculatus_S2_contig728.15473.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=444bp
MVRRHRNRTVVAAAALVACLCCGKAAAAAAAAGSFGGGVAMASPGDQARR
IKEEATALHRAGQYEEAAEEFARAAQVLEEAGVGLAPPPALSAIRLSLAA
SQLKSGDLRGAEATCSQLLKTPGLPRPLRQKASYRRGMSRKRQAEAAGAG
AAGSRLAQRAYRDAYLSVELSHDGGAAGPAAGDEKALGLMAEMEAGDWGQ
GWLTEADRSAARSKADKHLTALASMTPAARSSPAGSGGMFDMFGGGGGGG
AGAPGFPDLGSGAGAAGALGGMPGLMDMMGAGTGGVGGGAEEGMGGLMSM
LMGGGGAKSALGNGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCSL
LNQAKPETLMSLATTAGFPGANEAMVTKLSGYLQKADGKTLESWIDYGEI
ATCAYRRLKQMAVLWSRGIALAGIWLVWVWVRACFAPIVVQGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf