prot_E_fasciculatus_S2_contig7257.15449.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7257.15449.1
Unique Nameprot_E_fasciculatus_S2_contig7257.15449.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length278
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: D7G3N4_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3N4_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 2.610e-174
Identity = 248/278 (89.21%), Postives = 259/278 (93.17%), Query Frame = 0
Query:    1 MAISSLSRRQRVTVLLGAAAVAVLSRAYFVEVWKGVVLRGAGDTDANGYYKWEPTERSYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKANDKKQQQSRVWFVMRSDEPEYRNPTAASILDNTPPSTGWAVGGPRKDVGGGLRPPPEVHVCGKRVTPDADPAEQRSGGGGGRRGRSAFELGRGPAEVVSYPGTVLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYL 278
            MAISSLSRRQRVT LLGA+AVA+LS AYFVEVWKGVV+RG GDTDANGYYKWEPT++SYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKA DK QQQSRVWFVMRS EPEYR+P A S+LDNTPP+TGWAVG P+KD G GL PPPEVHVCGKRV PDADPAEQ   GGGGRRG+S FELGRGPAE+VSYPGTVLLLVINLAFAYHLWA RVSPDAVAISYA FWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYL
Sbjct:    1 MAISSLSRRQRVTALLGASAVAILSWAYFVEVWKGVVVRGGGDTDANGYYKWEPTQKSYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKAIDK-QQQSRVWFVMRSGEPEYRSPNALSVLDNTPPTTGWAVGSPQKDAGDGLGPPPEVHVCGKRVAPDADPAEQWKRGGGGRRGKSPFELGRGPAEIVSYPGTVLLLVINLAFAYHLWANRVSPDAVAISYARFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYL 277          
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: A0A835YKD5_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.060e-28
Identity = 85/251 (33.86%), Postives = 130/251 (51.79%), Query Frame = 0
Query:   28 YFVEVWKGVVLRGAGDTDANGYYKW----EPTERSYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKANDKKQQQSRVWFVMRSDEPEYRNPTAASILDNTPPSTGWAVGGPRKDVGGGLRPPPEVHVCGKRVTPDADPAEQRSGGGGGRRGRSAFELGRGPAEVVSYPGTVLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFR 274
            Y   +W+GVV++GA +   +GYY +    EPT+  Y+++A+      R+P+V+ L +  P    +    Y L+ +++      +   + S    Y +   +      PP TGW     R    G    PP +    +    +  P E R     GRRG    + G G A + + PGT +LL +N+A A  LW +RV P+AVA+SYA   ++++YWR  TASFSHFEPLHL FN M  +N+  LE+  G F+
Sbjct:   28 YHAGLWRGVVVQGARNPALDGYYHYNFADEPTQPMYVQNARRLGP--RLPDVFGLSALTPVTAGEDAKQYLLQQDNRGHWGLGLRGALTS---HYVSTDPSPPGTEAPPQTGWVA--VRARASGA---PPIIRAVWRA---EPAPKEWR-----GRRGGWEGD-GGGLAALAAMPGTAVLLAVNVAAALWLWVRRVPPEAVAVSYAAVVQDKQYWRCVTASFSHFEPLHLGFNMMSLYNSGPLEQDTGNFK 259          
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: A0A7S3XIE2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XIE2_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 4.110e-16
Identity = 78/289 (26.99%), Postives = 131/289 (45.33%), Query Frame = 0
Query:    3 ISSLSRRQRVTVLLGAAAVAVLSRAYFVEVWKGVVLRGAGDTDANGYYKWEPTERSYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKANDKKQQQSRVWFVMRSDEPEYRNPTAASILDNT------PPSTGWAVGGPR------KDVGGGLRPPPEVHVCGKRVTPDADPAEQRSGGGGGRRGRSAFELGRGPAEVVSYPGTVLLLVINLAFAYHLWAKRVSP-DAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYL 278
            I  L  +  + V+LG   +   +   F +    VV R  G++   G Y    +  ++  S Q     + +P++Y++  +G     + G +    A D+K     +W++      +    T A            PP  GW    PR      K++   + P P +   G  +  + + A      GG  +G +  +  R   E+++ P T+ LL++N A  Y LWA RV P D V+ S   F EE+EYWR  TASFSHF+ +H+ FN +  +N + +E + G + +L L
Sbjct:    8 IGMLRSKTSILVILGTTLLFYFAARTFDDKSYLVVTRPEGNSPITGIYFASVSSGAFAWSLQQDKKTY-LPDIYEISYKGKDGLAEPGTIQL--ARDRK-----LWYIYERFPGDQTKKTVALFTAEAGQSAFYPPKAGWRAV-PRDNTREAKNLAAAV-PGPIITYGGPTLLWELEVA------GGSNKGSNKQKNIR---ELLATPVTLFLLIVNAAAGYKLWADRVLPVDRVSFSVRAFVEEQEYWRAITASFSHFDLMHIGFNLLSLYNLKAVETVYGPWHHLCL 277          
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: A0A7S2RP04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP04_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.760e-15
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0
Query:  194 VVSYPGTVLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGT 272
            ++S PGT L+L +NL  A+ L+AK V  + VA+SY  F   +EYWR +TASF+H++ +HL+FN M  +N   LE + GT
Sbjct:   24 LISRPGTSLMLGLNLGAAWWLYAKSVPVERVAVSYEKFVVSKEYWRAWTASFAHYDIMHLLFNTMSLYNLGALEDIYGT 102          
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: A0A7S1XQ68_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQ68_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.240e-11
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  168 PAEQRSGGGGGRRGRS--AFELGRGPAEVVSYPGTVLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYL 278
            PAE   GGG  RR R   +   G G ++ ++ P T   L++N   A+ L+  RV  + VA +Y       EYWR  TA+FSH+EP+H +FN    +  + LE LLG+    YL
Sbjct:  132 PAEVTCGGGALRRVRQLRSGRTGEGVSQAMAAPVTCAFLLLNAVVAFLLYRWRVPWEDVAFNYEAVVGGGEYWRAATAAFSHYEPMHFLFNMSSLYAMQGLEALLGSVSLFYL 244          
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Match: K0RQF1_THAOC (Rhomboid domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RQF1_THAOC)

HSP 1 Score: 67.0 bits (162), Expect = 7.570e-9
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  194 VVSYPGTVLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNT-RELE-RLLGTFRYL 276
            V+ +P T +++++N+A A+H W +RV P +V+  YA    E E+WR  T + +HF+ LH+ FN +   N  RE+E  LL +  +L
Sbjct:  244 VIDHPATCVIILVNVALAFHYWNRRVDPSSVSKQYARIVHEHEWWRGITGATAHFDLLHVGFNMVSMDNLGREIEGTLLNSIEFL 328          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7257.15449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G3N4_ECTSI2.610e-17489.21Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YKD5_9STRA1.060e-2833.86Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3XIE2_HETAK4.110e-1626.99Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RP04_9STRA4.760e-1546.84Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1XQ68_9STRA6.240e-1138.05Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
K0RQF1_THAOC7.570e-937.65Rhomboid domain-containing protein n=1 Tax=Thalass... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 195..278
e-value: 1.8E-11
score: 46.1
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 234..277
e-value: 1.6E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR43731FAMILY NOT NAMEDcoord: 194..270
NoneNo IPR availablePANTHERPTHR43731:SF20RHOMBOID-LIKE PROTEIN 13coord: 194..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..278
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 198..278
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 12..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7257contigE_fasciculatus_S2_contig7257:3903..7237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7257.15449.1mRNA_E_fasciculatus_S2_contig7257.15449.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7257 3900..7237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7257.15449.1 ID=prot_E_fasciculatus_S2_contig7257.15449.1|Name=mRNA_E_fasciculatus_S2_contig7257.15449.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=278bp
MAISSLSRRQRVTVLLGAAAVAVLSRAYFVEVWKGVVLRGAGDTDANGYY
KWEPTERSYIKSAQAPAGAWRVPNVYDLVSRGPQFRKDAGPLYFLKANDK
KQQQSRVWFVMRSDEPEYRNPTAASILDNTPPSTGWAVGGPRKDVGGGLR
PPPEVHVCGKRVTPDADPAEQRSGGGGGRRGRSAFELGRGPAEVVSYPGT
VLLLVINLAFAYHLWAKRVSPDAVAISYALFWEEREYWRLFTASFSHFEP
LHLVFNAMGTWNTRELERLLGTFRYLYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf