prot_E_fasciculatus_S2_contig7228.15409.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7228.15409.1
Unique Nameprot_E_fasciculatus_S2_contig7228.15409.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length173
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7228.15409.1 vs. uniprot
Match: D8LG11_ECTSI (SKA2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG11_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 4.620e-99
Identity = 157/173 (90.75%), Postives = 164/173 (94.80%), Query Frame = 0 
Query:    1 MKDATRANVSIPDLHTLHHRIRAIKTELPRLAKDATEIEGERKETEIALNTALIENYNVMVGLYARLGVAPDPEWVATAAGVESFLPAPRDSGALSESFVSDGDEGEGIRSAVEEDAAQASTVPLHSGNPDLSASRVEERVVEQSPSVIFEEDFLAIHANTRGRSKLQDVRKV 173
            MKDATRANVSIPDLHTLHHRIRAIKTELP LAKDATE+E ERKETEIALNT +IENYNVMVGLYARLGVAPDPEWVATAA VESFLPAPRDSGA+S+SFVS GDEGEG+ SAVEEDA QASTV LHSGNP++SASRVEERVVEQS SVIFEEDFLAIHANTRGRSKLQDVRKV
Sbjct:   35 MKDATRANVSIPDLHTLHHRIRAIKTELPGLAKDATEVEAERKETEIALNTTVIENYNVMVGLYARLGVAPDPEWVATAADVESFLPAPRDSGAVSDSFVSGGDEGEGVGSAVEEDATQASTV-LHSGNPEMSASRVEERVVEQSFSVIFEEDFLAIHANTRGRSKLQDVRKV 206
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7228.15409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG11_ECTSI4.620e-9990.75SKA2 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042091Ska2, N-terminalPFAMPF16740SKA2coord: 4..75
e-value: 6.3E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7228contigE_fasciculatus_S2_contig7228:21..3625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7228.15409.1mRNA_E_fasciculatus_S2_contig7228.15409.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7228 3..3625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7228.15409.1 ID=prot_E_fasciculatus_S2_contig7228.15409.1|Name=mRNA_E_fasciculatus_S2_contig7228.15409.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=173bp
MKDATRANVSIPDLHTLHHRIRAIKTELPRLAKDATEIEGERKETEIALN
TALIENYNVMVGLYARLGVAPDPEWVATAAGVESFLPAPRDSGALSESFV
SDGDEGEGIRSAVEEDAAQASTVPLHSGNPDLSASRVEERVVEQSPSVIF
EEDFLAIHANTRGRSKLQDVRKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042091Ska2_N