prot_E_fasciculatus_S2_contig71.15272.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig71.15272.1
Unique Nameprot_E_fasciculatus_S2_contig71.15272.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length757
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs. uniprot
Match: D7G0G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G1_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 2.220e-155
Identity = 587/647 (90.73%), Postives = 594/647 (91.81%), Query Frame = 0 
Query:  110 FRRKIRVRKVSKRIARTTRYNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMALGGGGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTYSYLIXXXXKDANLEEALAYLTEMRAVGLAPTFFAYISAMGAIKIAGQWKEALDLLDEMAKDRLISDVFSFHNVVDAYGKDGQLARTLVQLNANATEIGTDSENEMRSDAGLNAWRAEEPEELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLXXXXXXXXXXXXXXXXXXXXXXXRGGTDEEWRLALDLLXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPHTPEGGEVG 756
            FRRKIRVRKVSKRIARTTR+NSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ALGG GVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQT     XXXX              MRAVGLAPTFFAYISAM AIK+AGQWKEAL LLDEMAK RLISDVFSF+NVVDAYGKDGQLARTLVQ +AN TEI  DSENEMRSDA LNAWRAE+P+ELVKRMENNGVELDVMSFNILIDACARGGSHWAAARL                       RGGTDEEWRLALDL XXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSP TPEGGEVG
Sbjct:    4 FRRKIRVRKVSKRIARTTRHNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALGGEGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTXXXXXXXXXXXXXXXXXXXXXXXMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTSANPTEIAADSENEMRSDADLNAWRAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPGTPEGGEVG 650
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BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs. uniprot
Match: A0A6H5JZN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN1_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 1.500e-145
Identity = 325/409 (79.46%), Postives = 332/409 (81.17%), Query Frame = 0 
Query:  367 AMALGGGGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTYSYLIXXXXKDANLEEALAYLTEMRAVGLAPTFFAYISAMGAIKIAGQWKEALDLLDEMAKDRLISDVFSFHNVVDAYGKDGQLARTLVQLNANATEIGTDSENEMRSDAGLNAWRAEEPEELVKRMENNGVELDVMSFNILIDACAR-------------------GGSHWAAARLXXXXXXXXXXXXXXXXXXXXXXXRGGTDEEWRLALDLLXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPHTPEGGEVG 756
            A+A  G GVPMSTTMYNFGI                 RMKSNPATPPDAQTY+YLI    KDANLE+ALAYLTEMRAVGLAPTFFAYISAM AIK+AGQWKEAL LLDEMAK RLISDVFSF+NVVDAYGKDGQLARTLVQ NAN TEI  DSENEMRSDA LNAWRAEEP+ELVKRMENNGVELDVMSFNILIDACAR                   GGSHWAAARL                       RGGTDEEWRLALDL XXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLL+PIPTSDVYLGGS  TPEGGEVG
Sbjct:   76 ALAQRGEGVPMSTTMYNFGIDAGVALLE---------RMKSNPATPPDAQTYAYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTNANPTEIAADSENEMRSDADLNAWRAEEPDELVKRMENNGVELDVMSFNILIDACARYTAHRVPLPLPMSHVPFRKGGSHWAAARLLKKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLDPIPTSDVYLGGSSGTPEGGEVG 475
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0G1_ECTSI2.220e-15590.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZN1_9PHAE1.500e-14579.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 256..317
e-value: 2.0E-13
score: 50.2
coord: 540..598
e-value: 6.7E-11
score: 42.1
coord: 612..671
e-value: 4.2E-12
score: 46.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 163..211
e-value: 2.4E-8
score: 34.0
coord: 379..427
e-value: 7.0E-8
score: 32.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 305..339
e-value: 5.1E-5
score: 21.2
coord: 626..660
e-value: 8.0E-6
score: 23.7
coord: 235..269
e-value: 6.8E-6
score: 23.9
coord: 417..449
e-value: 1.6E-5
score: 22.8
coord: 555..587
e-value: 5.1E-5
score: 21.2
coord: 165..198
e-value: 2.0E-5
score: 22.5
coord: 270..304
e-value: 9.3E-8
score: 29.8
coord: 200..234
e-value: 1.1E-6
score: 26.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 463..479
e-value: 0.47
score: 10.8
coord: 345..366
e-value: 0.18
score: 12.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 624..658
score: 11.224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 414..448
score: 11.312
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 198..232
score: 10.939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 7.706
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 449..483
score: 7.454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 378..412
score: 9.843
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 11.707
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 484..519
score: 5.546
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 125..162
score: 7.278
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 659..689
score: 8.517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 11.345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 10.841
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 552..586
score: 11.52
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 11.005
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 587..623
score: 8.78
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 120..256
e-value: 5.0E-30
score: 107.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 369..528
e-value: 1.0E-27
score: 99.3
coord: 257..368
e-value: 4.2E-32
score: 113.7
coord: 601..732
e-value: 1.3E-27
score: 98.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 529..600
e-value: 4.9E-14
score: 54.0
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 533..598
coord: 292..366
coord: 346..503
coord: 143..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig71contigE_fasciculatus_S2_contig71:5018..13169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig71.15272.1mRNA_E_fasciculatus_S2_contig71.15272.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig71 5018..14197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig71.15272.1 ID=prot_E_fasciculatus_S2_contig71.15272.1|Name=mRNA_E_fasciculatus_S2_contig71.15272.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=757bp
MMESNSHPCFRVHSRLAPLGFIPATHRARSPRPNEPWQLSRRRHRLGCSA
AGARTAAEGDHDAHGGVGVGNDGGDIGGFHEQAAARPPAPVQGCTARKGS
TSLNIKEINFRRKIRVRKVSKRIARTTRYNSFISTAKVRGARGQWREVLR
LLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRMLSEGIRLDGY
TFSALIEACSKGGNVAKGLELLREMVDAGVARDCFCYNAALHGFVRSGDS
KNALLMLEDMVADGVRPDAVTYGTLLACCGNSGEWKLCMSLMDRMRSEGI
TPNAYSFSPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACG
NAGQWEEALRLIDKLEAMALGGGGVPMSTTMYNFGIDACARAGRWDQGMP
LLERMKSNPATPPDAQTYSYLINACAKDANLEEALAYLTEMRAVGLAPTF
FAYISAMGAIKIAGQWKEALDLLDEMAKDRLISDVFSFHNVVDAYGKDGQ
LARTLVQLNANATEIGTDSENEMRSDAGLNAWRAEEPEELVKRMENNGVE
LDVMSFNILIDACARGGSHWAAARLLKKMKSLGLRPNSLSFNPIIHSCRG
GTDEEWRLALDLLDDMRKSGLTPDVISFNTAITSCAKAGDWRRSLNLFAG
MKVEGVTPDILSYNAVISACAKGGQWRIGLELLAKVRADPTLEANQRTYT
SAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPHTP
EGGEVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat