mRNA_E_fasciculatus_S2_contig71.15272.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G1_ECTSI) HSP 1 Score: 476 bits (1225), Expect = 1.350e-151 Identity = 587/647 (90.73%), Postives = 594/647 (91.81%), Query Frame = 1
Query: 328 FRRKIRVRKVSKRIARTTRYNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMALGGGGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTYSYLIXXXXKDANLEEALAYLTEMRAVGLAPTFFAYISAMGAIKIAGQWKEALDLLDEMAKDRLISDVFSFHNVVDAYGKDGQLARTLVQLNANATEIGTDSENEMRSDAGLNAWRAEEPEELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLXXXXXXXXXXXXXXXXXXXXXXXRGGTDEEWRLALDLLXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPHTPEGGEVG 2268
FRRKIRVRKVSKRIARTTR+NSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ALGG GVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQT XXXX MRAVGLAPTFFAYISAM AIK+AGQWKEAL LLDEMAK RLISDVFSF+NVVDAYGKDGQLARTLVQ +AN TEI DSENEMRSDA LNAWRAE+P+ELVKRMENNGVELDVMSFNILIDACARGGSHWAAARL RGGTDEEWRLALDL XXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSP TPEGGEVG
Sbjct: 4 FRRKIRVRKVSKRIARTTRHNSFISTAKVRGARGQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALALGGEGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTXXXXXXXXXXXXXXXXXXXXXXXMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTSANPTEIAADSENEMRSDADLNAWRAEDPDELVKRMENNGVELDVMSFNILIDACARGGSHWAAARLLTKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPGTPEGGEVG 650
BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN1_9PHAE) HSP 1 Score: 444 bits (1143), Expect = 5.980e-142 Identity = 325/409 (79.46%), Postives = 332/409 (81.17%), Query Frame = 1
Query: 1099 AMALGGGGVPMSTTMYNFGIXXXXXXXXXXXXXXXXXRMKSNPATPPDAQTYSYLIXXXXKDANLEEALAYLTEMRAVGLAPTFFAYISAMGAIKIAGQWKEALDLLDEMAKDRLISDVFSFHNVVDAYGKDGQLARTLVQLNANATEIGTDSENEMRSDAGLNAWRAEEPEELVKRMENNGVELDVMSFNILIDACAR-------------------GGSHWAAARLXXXXXXXXXXXXXXXXXXXXXXXRGGTDEEWRLALDLLXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLNPIPTSDVYLGGSPHTPEGGEVG 2268
A+A G GVPMSTTMYNFGI RMKSNPATPPDAQTY+YLI KDANLE+ALAYLTEMRAVGLAPTFFAYISAM AIK+AGQWKEAL LLDEMAK RLISDVFSF+NVVDAYGKDGQLARTLVQ NAN TEI DSENEMRSDA LNAWRAEEP+ELVKRMENNGVELDVMSFNILIDACAR GGSHWAAARL RGGTDEEWRLALDL XXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLL+PIPTSDVYLGGS TPEGGEVG
Sbjct: 76 ALAQRGEGVPMSTTMYNFGIDAGVALLE---------RMKSNPATPPDAQTYAYLIDACAKDANLEDALAYLTEMRAVGLAPTFFAYISAMSAIKVAGQWKEALSLLDEMAKGRLISDVFSFYNVVDAYGKDGQLARTLVQTNANPTEIAADSENEMRSDADLNAWRAEEPDELVKRMENNGVELDVMSFNILIDACARYTAHRVPLPLPMSHVPFRKGGSHWAAARLLKKMKSLGLRPNSLSYNPIIHSCRGGTDEEWRLALDLXXXXXXXXXXXXXXXXXXXXXXXAKAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAGQSSREEMLLDPIPTSDVYLGGSSGTPEGGEVG 475 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig71.15272.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig71.15272.1 >prot_E_fasciculatus_S2_contig71.15272.1 ID=prot_E_fasciculatus_S2_contig71.15272.1|Name=mRNA_E_fasciculatus_S2_contig71.15272.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=757bp MMESNSHPCFRVHSRLAPLGFIPATHRARSPRPNEPWQLSRRRHRLGCSAback to top mRNA from alignment at E_fasciculatus_S2_contig71:5018..14197+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig71.15272.1 ID=mRNA_E_fasciculatus_S2_contig71.15272.1|Name=mRNA_E_fasciculatus_S2_contig71.15272.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=9180bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig71:5018..14197+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig71:5018..14197+ >mRNA_E_fasciculatus_S2_contig71.15272.1 ID=mRNA_E_fasciculatus_S2_contig71.15272.1|Name=mRNA_E_fasciculatus_S2_contig71.15272.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2271bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig71:5018..14197+ (Ectocarpus fasciculatus EfasUO2)back to top |