prot_E_fasciculatus_S2_contig708.15247.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig708.15247.1
Unique Nameprot_E_fasciculatus_S2_contig708.15247.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length116
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig708.15247.1 vs. uniprot
Match: D7FLI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI1_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.520e-45
Identity = 92/116 (79.31%), Postives = 98/116 (84.48%), Query Frame = 0 
Query:    1 MRTVQVAATFLAIYRVAGFVIPVSLPLRPAAVSSPTSSSQPATHVVRRQQQPPFEARHNTPVLMASSRGGRGEEE-VEEVEEKGGIEPKYLAAIAVVLFAALYDLFVTHEGRLWEL 115
            MRTVQVAA FLAIYRV+GFVIP SL  RPAA S PTSS QPATHV   ++Q PF+ARH  PVLMAS  GGRGEEE V++VEEKGGIEPKYLAAI VVLFAALYDLFVTH GRLWEL
Sbjct:    1 MRTVQVAAAFLAIYRVSGFVIPASLQSRPAA-SIPTSS-QPATHVEHVRRQQPFDARH-APVLMASQ-GGRGEEEEVDDVEEKGGIEPKYLAAIGVVLFAALYDLFVTHGGRLWEL 112
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig708.15247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLI1_ECTSI1.520e-4579.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..115
NoneNo IPR availableTMHMMTMhelixcoord: 89..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig708contigE_fasciculatus_S2_contig708:21596..22737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig708.15247.1mRNA_E_fasciculatus_S2_contig708.15247.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig708 21518..23571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig708.15247.1 ID=prot_E_fasciculatus_S2_contig708.15247.1|Name=mRNA_E_fasciculatus_S2_contig708.15247.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=116bp
MRTVQVAATFLAIYRVAGFVIPVSLPLRPAAVSSPTSSSQPATHVVRRQQ
QPPFEARHNTPVLMASSRGGRGEEEVEEVEEKGGIEPKYLAAIAVVLFAA
LYDLFVTHEGRLWEL*
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