prot_E_fasciculatus_S2_contig7034.15199.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7034.15199.1
Unique Nameprot_E_fasciculatus_S2_contig7034.15199.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length121
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7034.15199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 58..81
e-value: 53.0
score: 7.3
coord: 34..57
e-value: 180.0
score: 3.0
coord: 82..106
e-value: 7.1
score: 14.5
coord: 10..33
e-value: 200.0
score: 2.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 36..95
e-value: 5.1E-11
score: 42.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 60..83
score: 7.158
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 108..121
score: 5.64
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 36..59
score: 5.371
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 84..107
score: 5.964
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..121
e-value: 2.7E-39
score: 136.9
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 59..121
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 59..121
coord: 1..88
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 1..88
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7034contigE_fasciculatus_S2_contig7034:2680..6504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7034.15199.1mRNA_E_fasciculatus_S2_contig7034.15199.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7034 2680..6504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7034.15199.1 ID=prot_E_fasciculatus_S2_contig7034.15199.1|Name=mRNA_E_fasciculatus_S2_contig7034.15199.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=121bp
GSIPKELGGLVNLDDLRLNDNELIGVMPAELGRLKTLRKLCLDGNGLTGS
IPEALGGLVNLEDLWLSNNNLRGSIPVELGDLVKLQELHLDDNKLTGTIP
RELGTLATLQKLNLSKNGLTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp