prot_E_fasciculatus_S2_contig7031.15196.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7031.15196.1
Unique Nameprot_E_fasciculatus_S2_contig7031.15196.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length108
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A6H5L0N9_9PHAE (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N9_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.860e-62
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD 108
            MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD
Sbjct: 2235 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD 2342          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: D7G846_ECTSI (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G846_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 1.630e-61
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD 108
            MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSR QVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD
Sbjct: 2340 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRLQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKFD 2447          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A699Z3X2_HAELA (DNA polymerase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z3X2_HAELA)

HSP 1 Score: 162 bits (410), Expect = 3.120e-45
Identity = 78/106 (73.58%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            +D LDL+GRT+EMAR FGIDFFSVLSRGSQYRVE++++R+    N+V +SPSR+QV GQ AME+IPLV EP SR YTSPVVVLDFQSLYPS MIAYNLCY+T LG+
Sbjct:  163 IDTLDLVGRTAEMARAFGIDFFSVLSRGSQYRVESLLVRLAHTQNYVMLSPSREQVGGQPAMEAIPLVMEPESRMYTSPVVVLDFQSLYPSQMIAYNLCYSTCLGR 268          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A7R9YD13_9STRA (DNA polymerase zeta catalytic subunit (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD13_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.110e-45
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            ++KLD+LG TSEMARL GIDF SV +RGSQYRVEAVM RV+KP NF  VSPSR QVA Q ++E IPLV EP SRFYT PV+VLDFQSLYPSM+ AYNLC++T LGK
Sbjct:  192 LEKLDVLGTTSEMARLIGIDFTSVRTRGSQYRVEAVMCRVVKPRNFAVVSPSRPQVASQPSLEVIPLVMEPESRFYTDPVLVLDFQSLYPSMICAYNLCFSTCLGK 297          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A7R9TJ56_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJ56_MICPS)

HSP 1 Score: 152 bits (383), Expect = 9.210e-45
Identity = 71/106 (66.98%), Postives = 91/106 (85.85%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            +++LDL+ RTSE AR+FGIDFFSVLSRGSQYRVE+++LR+    N++AVSPS++QVA Q AME +PLV EP S+ Y+ PV VLDFQSLYPSM+IAYNLC++T LG+
Sbjct:   30 LEQLDLVARTSEQARIFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAVSPSKEQVARQPAMECLPLVMEPESKMYSDPVAVLDFQSLYPSMVIAYNLCFSTCLGR 135          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A0G4KZH4_9PEZI (DNA polymerase zeta catalytic subunit (Fragment) n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4KZH4_9PEZI)

HSP 1 Score: 156 bits (394), Expect = 2.420e-44
Identity = 72/102 (70.59%), Postives = 88/102 (86.27%), Query Frame = 0
Query:    5 DLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            +L+ RTSE ARL G+DFFSV SRGSQY+VE++M R+ KP NF+ VSPSRQQV GQ A+E +PLV EP+S FY+SPV+VLDFQSLYPS+MIAYNLCY+T LG+
Sbjct:  200 ELIPRTSEQARLLGVDFFSVFSRGSQYKVESIMFRIAKPENFILVSPSRQQVGGQNALECLPLVMEPQSAFYSSPVLVLDFQSLYPSVMIAYNLCYSTFLGR 301          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A2K1L449_PHYPA (DNA polymerase zeta catalytic subunit n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L449_PHYPA)

HSP 1 Score: 162 bits (409), Expect = 5.370e-44
Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            +D+LDLL RTSE+AR+FGIDF+SV SRGSQ+RVE++MLR+    NF+ +SPSRQQVA Q AME +PLV EP SRFYTSPVVVLDFQSLYPSM+IAYNLC++T LGK
Sbjct: 2155 IDQLDLLNRTSELARVFGIDFYSVFSRGSQFRVESMMLRLAHTQNFLLLSPSRQQVAAQPAMECLPLVMEPESRFYTSPVVVLDFQSLYPSMIIAYNLCFSTCLGK 2260          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A5A7RCF9_STRAF (DNA polymerase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RCF9_STRAF)

HSP 1 Score: 161 bits (407), Expect = 9.910e-44
Identity = 75/107 (70.09%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGKF 107
            M++LD++ RTSE+AR+FGIDFFSVLSRGSQYRVE++ LR+    NF+A+SP +QQVAGQ AME +PLV EP S+FY  PV+VLDFQSLYPSM+IAYNLC+ T LGKF
Sbjct: 1250 MNQLDMINRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNFLAISPGKQQVAGQPAMECLPLVMEPESKFYADPVIVLDFQSLYPSMVIAYNLCFCTCLGKF 1356          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: A0A4U6W4Y6_SETVI (DNA_pol_B domain-containing protein n=1 Tax=Setaria viridis TaxID=4556 RepID=A0A4U6W4Y6_SETVI)

HSP 1 Score: 148 bits (373), Expect = 1.340e-43
Identity = 71/100 (71.00%), Postives = 83/100 (83.00%), Query Frame = 0
Query:    7 LGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            + RTSE AR+FGIDFFSVLSRGSQYRVE+++LR+    N++A+SP  QQVA Q AME +PLV EP S FY  PVVVLDFQSLYPSM+IAYNLCY+T LGK
Sbjct:   26 VNRTSEFARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESAFYPDPVVVLDFQSLYPSMIIAYNLCYSTCLGK 125          
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Match: W2QX79_PHYPN (DNA polymerase n=10 Tax=Phytophthora TaxID=4783 RepID=W2QX79_PHYPN)

HSP 1 Score: 160 bits (406), Expect = 1.350e-43
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    1 MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVSPSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCYTTILGK 106
            + K+ L+ RTSEMARLFGIDF+SVLSRGSQYRVEAVMLRV K  NF+ VSPSR QVAGQA ME IPLV EP S FY  PVVVLDFQSLYPS++I YNLCY++ILG+
Sbjct: 1039 LSKMQLITRTSEMARLFGIDFYSVLSRGSQYRVEAVMLRVTKRKNFLLVSPSRNQVAGQAPMECIPLVMEPYSSFYPDPVVVLDFQSLYPSLVIGYNLCYSSILGR 1144          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7031.15196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0N9_9PHAE1.860e-62100.00DNA polymerase zeta catalytic subunit n=1 Tax=Ecto... [more]
D7G846_ECTSI1.630e-6199.07DNA polymerase zeta catalytic subunit n=1 Tax=Ecto... [more]
A0A699Z3X2_HAELA3.120e-4573.58DNA polymerase (Fragment) n=1 Tax=Haematococcus la... [more]
A0A7R9YD13_9STRA5.110e-4573.58DNA polymerase zeta catalytic subunit (Fragment) n... [more]
A0A7R9TJ56_MICPS9.210e-4566.98Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A0G4KZH4_9PEZI2.420e-4470.59DNA polymerase zeta catalytic subunit (Fragment) n... [more]
A0A2K1L449_PHYPA5.370e-4473.58DNA polymerase zeta catalytic subunit n=5 Tax=Phys... [more]
A0A5A7RCF9_STRAF9.910e-4470.09DNA polymerase n=1 Tax=Striga asiatica TaxID=4170 ... [more]
A0A4U6W4Y6_SETVI1.340e-4371.00DNA_pol_B domain-containing protein n=1 Tax=Setari... [more]
W2QX79_PHYPN1.350e-4375.47DNA polymerase n=10 Tax=Phytophthora TaxID=4783 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 21..106
e-value: 9.3E-23
score: 80.6
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10coord: 1..108
e-value: 1.2E-19
score: 72.3
IPR030559DNA polymerase zeta catalytic subunitPANTHERPTHR45812FAMILY NOT NAMEDcoord: 1..107
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 28..105
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7031contigE_fasciculatus_S2_contig7031:1442..3181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7031.15196.1mRNA_E_fasciculatus_S2_contig7031.15196.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7031 1442..3205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7031.15196.1 ID=prot_E_fasciculatus_S2_contig7031.15196.1|Name=mRNA_E_fasciculatus_S2_contig7031.15196.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=108bp
MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRVLKPHNFVAVS
PSRQQVAGQAAMESIPLVFEPRSRFYTSPVVVLDFQSLYPSMMIAYNLCY
TTILGKFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR030559PolZ_Rev3
IPR023211DNA_pol_palm_dom_sf
IPR006134DNA-dir_DNA_pol_B_multi_dom