prot_E_fasciculatus_S2_contig7024.15188.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7024.15188.1
Unique Name	prot_E_fasciculatus_S2_contig7024.15188.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	489

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7024.15188.1 vs. uniprot
Match: D8LFX9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX9_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 2.000e-143
Identity = 300/440 (68.18%), Postives = 313/440 (71.14%), Query Frame = 0

Query:   54 MGAGYGGSSA---SXXXXXXXXXXKTASKPKSDWKKCWDYKQAATYYKHVHTKESRWANADDPTWMEATDPASGHIFLEHATTGETRWKAEQHQAGAVGGXXXXXXXXXXXXXXTNDSGGSVAGEARRAAATSNRKTVWEEIKEPGSGVSYYFSSVSHSSQWHPPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVVQATEENPAENLFEGKSAAGTEGAGAARSRAPSPSSQRPPPPGVRGGKSCFPGGVTAASRRCSAQPSGIVEPPLPAPPTVRSKPVSPPPRNPESPSGGKDNHIRPPKPPARTPGSEFAPXXXXXXXXXXXXXXXXXXXGEAAPAVPGVSASKGAGGATAFTPP--PVMTRLPSPPTTPKDGSPAGRRSPRGSVPPXXXXXXAENLPAALEDLDVDSEXXXXXXXXXXXXXXDGIAVEAGTATG 488
            MGAG GGSS     XXXXX     KTASKPKSDWKKCWDYKQAATYYKHVHTKESRWANA+DP WMEATDPASGHIFLEHATTGETRWKAEQ    AVGGXXXXXXXXXXXXXXT +SGG V GEA  AAATSNR+TVWEEIKEPGSGVSYYFSS S +SQWHPPV                                        +N+F+GK+AAGT+G GAARS APSPS QRPPPPGVRG  SC PG VTAASRR SAQ                        R PESPSGGKDN+IRPPKPPART GSEF  XXXXXXXXXXXXXXXXX  GEA PAV GV ASKG GGATAFTP   PVMTR+PSPPTTPKDGSPA RRSPRGSVPPXXXXXXAENLPAA+ED DVDS               DGI +EAG ATG
Sbjct:    1 MGAGCGGSSTLGGXXXXXXVGGRGKTASKPKSDWKKCWDYKQAATYYKHVHTKESRWANAEDPAWMEATDPASGHIFLEHATTGETRWKAEQQYQAAVGGXXXXXXXXXXXXXXTKESGGRVVGEAGSAAATSNRQTVWEEIKEPGSGVSYYFSSESQTSQWHPPVWMDYID---------------------------------TKNIFQGKAAAGTQGVGAARSGAPSPSPQRPPPPGVRGRNSCTPGSVTAASRRGSAQR-----------------------RCPESPSGGKDNNIRPPKPPARTAGSEFXXXXXXXXXXXXXXXXXXXARGEATPAVTGV-ASKGEGGATAFTPSMKPVMTRVPSPPTTPKDGSPAARRSPRGSVPPXXXXXXAENLPAAVEDSDVDSGEEHGDGGNTSGDDEDGIDLEAGGATG 383

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BLAST of mRNA_E_fasciculatus_S2_contig7024.15188.1 vs. uniprot
Match: A0A6H5JTC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC0_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.130e-19
Identity = 63/94 (67.02%), Postives = 68/94 (72.34%), Query Frame = 0

Query:  397 ASKGAGGATAFTPP--PVMTRLPSPPTTPKDGSPAGRRSPRGSVPPXXXXXXAENLPAALEDLDVDSEXXXXXXXXXXXXXXDGIAVEAGTATG 488
            ASKG GGATA TP   PV+TR+P PPTTPKDGSPAGRRSPRGSVP XXXXXXAE+LPAA+ED DV S               DGI +EAG ATG
Sbjct:    8 ASKGEGGATALTPSMKPVVTRVPPPPTTPKDGSPAGRRSPRGSVPXXXXXXXAESLPAAVEDSDVYSGDEHGDGGNTSGDDEDGIDLEAGVATG 101

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7024.15188.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7024.15188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFX9_ECTSI	2.000e-143	68.18	WW domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5JTC0_9PHAE	4.130e-19	67.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	SMART	SM00456	ww_5	coord: 184..217 e-value: 0.08 score: 22.1 coord: 219..245 e-value: 3.4 score: 11.9 coord: 79..115 e-value: 5.2 score: 10.2
IPR001202	WW domain	PFAM	PF00397	WW	coord: 214..243 e-value: 1.7E-7 score: 31.2
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 211..245 score: 11.152
None	No IPR available	GENE3D	2.20.70.10		coord: 216..257 e-value: 3.5E-9 score: 37.7
IPR039726	Pre-mRNA-processing factor Prp40	PANTHER	PTHR11864	PRE-MRNA-PROCESSING PROTEIN PRP40	coord: 181..258 coord: 110..215
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 214..245

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7024	contig	E_fasciculatus_S2_contig7024:312..6552 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7024.15188.1	mRNA_E_fasciculatus_S2_contig7024.15188.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7024 312..6552 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7024.15188.1 ID=prot_E_fasciculatus_S2_contig7024.15188.1|Name=mRNA_E_fasciculatus_S2_contig7024.15188.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=489bp
MSLPPHPNMLAGRATPPSPPSANAATAGGGSSTPRAMGIGHRTPQGKSDL
GHSMGAGYGGSSASGGRGGVGGGGKTASKPKSDWKKCWDYKQAATYYKHV
HTKESRWANADDPTWMEATDPASGHIFLEHATTGETRWKAEQHQAGAVGG
GGGRDRDKGAGPGPTNDSGGSVAGEARRAAATSNRKTVWEEIKEPGSGVS
YYFSSVSHSSQWHPPVWMDYVDTKENVVYYVNTRTNESLWEKPAGFVVQA
TEENPAENLFEGKSAAGTEGAGAARSRAPSPSSQRPPPPGVRGGKSCFPG
GVTAASRRCSAQPSGIVEPPLPAPPTVRSKPVSPPPRNPESPSGGKDNHI
RPPKPPARTPGSEFAPPPPPREKTPVPSGTPPPVRGEAAPAVPGVSASKG
AGGATAFTPPPVMTRLPSPPTTPKDGSPAGRRSPRGSVPPPPGPPPAENL
PAALEDLDVDSEEEHGGDDNTSGDDDDGIAVEAGTATG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036020	WW_dom_sf
IPR039726	Prp40-like
IPR001202	WW_dom