prot_E_fasciculatus_S2_contig6997.15134.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6997.15134.1
Unique Nameprot_E_fasciculatus_S2_contig6997.15134.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length238
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6997.15134.1 vs. uniprot
Match: A0A6H5K0V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V0_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.710e-110
Identity = 176/213 (82.63%), Postives = 185/213 (86.85%), Query Frame = 0 
Query:    1 MKRREPKAGIPWTVGSEAESPLLLEAQRLALDVERSLQCRNCTPNCPINGPRHSWEFMRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGSEAQSWSMADRVVRGTFDSIQSWLRVRAVTRRKANRMTSRHRHGSPHETAAEEEAAARSVARSSVEEEESVGSADREEATAGREGGVQRAPTSGEGDEATEADNEAAISRASESL 213
            MKRREP AGIPWTVG EAE+PLLL A RL+LDVERSLQCRNC PNCPINGPRHSWEFMR ESEATEILGVDAEL+VNFECVNCHSIHLGVP PAKG+GSE QSWSMAD VVRGTFDSI SWLRVRAV+ RKAN + SR R  SPHE AAE EAAARSVA SSVEEEESVGS D +EAT GREGG+Q APTS EGD  TEADN AAISRAS +L
Sbjct:  205 MKRREPNAGIPWTVGCEAETPLLLNAHRLSLDVERSLQCRNCKPNCPINGPRHSWEFMRGESEATEILGVDAELRVNFECVNCHSIHLGVPFPAKGVGSEVQSWSMADEVVRGTFDSISSWLRVRAVSPRKANSIASRSRDASPHEAAAEGEAAARSVAPSSVEEEESVGSRDVDEATVGREGGMQGAPTSREGDGGTEADNGAAISRASATL 417
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BLAST of mRNA_E_fasciculatus_S2_contig6997.15134.1 vs. uniprot
Match: D8LNQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ4_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.010e-76
Identity = 122/149 (81.88%), Postives = 125/149 (83.89%), Query Frame = 0 
Query:    1 MKRREPKAGIPWTVGSEAESPLLLEAQRLALDVERSLQCRNCTPNCPINGPRHSWEFMRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGSEAQSWSMADRVVRGTFDSIQSWLRVRAVTRRKANRMTSRHRHGSPHETAA 149
            MKRREP  GIPWTVG EAE+PLLLEA RL LD+ERSLQCRNC PNCPINGPRHSWEFMRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLG E QSWSMAD VVRGTFDSI SWLRVRA     A R   R R  +P E AA
Sbjct:  271 MKRREPNTGIPWTVGCEAETPLLLEAHRLTLDIERSLQCRNCKPNCPINGPRHSWEFMRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGYEVQSWSMADEVVRGTFDSISSWLRVRAGPS-SATRGGRRQRQPAPPEKAA 418
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6997.15134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0V0_9PHAE2.710e-11082.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ4_ECTSI1.010e-7681.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 27..56
score: 7.214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6997contigE_fasciculatus_S2_contig6997:1928..2641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6997.15134.1mRNA_E_fasciculatus_S2_contig6997.15134.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6997 1904..3263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6997.15134.1 ID=prot_E_fasciculatus_S2_contig6997.15134.1|Name=mRNA_E_fasciculatus_S2_contig6997.15134.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=238bp
MKRREPKAGIPWTVGSEAESPLLLEAQRLALDVERSLQCRNCTPNCPING
PRHSWEFMRCESEATEILGVDAELKVNFECVNCHSIHLGVPLPAKGLGSE
AQSWSMADRVVRGTFDSIQSWLRVRAVTRRKANRMTSRHRHGSPHETAAE
EEAAARSVARSSVEEEESVGSADREEATAGREGGVQRAPTSGEGDEATEA
DNEAAISRASESLNTVSEHAKEGMVHTGSKKKSRYAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0178964Fe4S_Fe-S-bd