prot_E_fasciculatus_S2_contig6935.15071.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6935.15071.1
Unique Nameprot_E_fasciculatus_S2_contig6935.15071.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length356
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6935.15071.1 vs. uniprot
Match: D7FMC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMC0_ECTSI)

HSP 1 Score: 559 bits (1441), Expect = 6.710e-199
Identity = 313/356 (87.92%), Postives = 330/356 (92.70%), Query Frame = 0 
Query:    1 MSVAPAATLSPALSAEPPTAAIVANEPVPAEGGGRVSATSTPGXXXXXXXXXXXXXEHAADVESGTRRPMPIPAAVAAPEAGGPTADGVEKSCGLTSRRWHQLFALGIGLLEAAFSLSNAIAEDAFKIEDAAGFVYSASAVQESVGLAVMLLLSLCRRRGGEQGAAMEGFGSPLAILVNGVRQTDRSLTRSGHFGAMCQAAVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTNNVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALVALPLGVDVAEVVFLFLGGQSWNATILALLDVGVTAVVVFPFGYRRFMRDFPEAARRLGLDSGRACEHY-CFCNLDALLHVVFV 355
            MSVAP AT+SP  S EPPTA I+ANEPVPAEGGG +SATS+  XXXXXXXXXXXX EHAADVESGTRRP+P  AA AAP AGGPTAD VEKSCGLTSRRWHQLFALGIGLLEAAFSL+NAIAEDAFKIEDAA FV+SASAVQESVGLAVMLLLSLCR R GEQ A ME FGSPLAILVNGVRQTDRSLT++GHFGAMCQAAVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTN VFCAGYFRNLVVVSRLDSALDPDNPAVGLTYAL+ALPLGVDVAE++FLFLGGQSWNATILALLDVGVTA+VVFPFGY+RFM  FPEAARRLGLDSGRAC+HY C CNL+ LL+VVFV
Sbjct:    1 MSVAPVATVSPVFSDEPPTAVILANEPVPAEGGGWISATSS--XXXXXXXXXXXXEEHAADVESGTRRPIPTRAA-AAPAAGGPTADDVEKSCGLTSRRWHQLFALGIGLLEAAFSLNNAIAEDAFKIEDAASFVFSASAVQESVGLAVMLLLSLCRARVGEQDAVMEEFGSPLAILVNGVRQTDRSLTKTGHFGAMCQAAVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTNTVFCAGYFRNLVVVSRLDSALDPDNPAVGLTYALIALPLGVDVAEILFLFLGGQSWNATILALLDVGVTAMVVFPFGYKRFMTAFPEAARRLGLDSGRACDHYYCCCNLETLLYVVFV 353
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6935.15071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMC0_ECTSI6.710e-19987.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..222
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 317..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 247..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..192
NoneNo IPR availableTMHMMTMhelixcoord: 218..240
NoneNo IPR availableTMHMMTMhelixcoord: 192..211
NoneNo IPR availableTMHMMTMhelixcoord: 294..316
NoneNo IPR availableTMHMMTMhelixcoord: 265..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6935contigE_fasciculatus_S2_contig6935:4152..5219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6935.15071.1mRNA_E_fasciculatus_S2_contig6935.15071.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6935 4152..5219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6935.15071.1 ID=prot_E_fasciculatus_S2_contig6935.15071.1|Name=mRNA_E_fasciculatus_S2_contig6935.15071.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=356bp
MSVAPAATLSPALSAEPPTAAIVANEPVPAEGGGRVSATSTPGAAAAAAA
AAVVVEEHAADVESGTRRPMPIPAAVAAPEAGGPTADGVEKSCGLTSRRW
HQLFALGIGLLEAAFSLSNAIAEDAFKIEDAAGFVYSASAVQESVGLAVM
LLLSLCRRRGGEQGAAMEGFGSPLAILVNGVRQTDRSLTRSGHFGAMCQA
AVVAVTGLVLLQKVDARGFVILFYALLVLFCGFCLVTNNVFCAGYFRNLV
VVSRLDSALDPDNPAVGLTYALVALPLGVDVAEVVFLFLGGQSWNATILA
LLDVGVTAVVVFPFGYRRFMRDFPEAARRLGLDSGRACEHYCFCNLDALL
HVVFV*
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