prot_E_fasciculatus_S2_contig693.15066.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig693.15066.1
Unique Nameprot_E_fasciculatus_S2_contig693.15066.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length503
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig693.15066.1 vs. uniprot
Match: D7FUK7_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK7_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 4.620e-104
Identity = 259/377 (68.70%), Postives = 265/377 (70.29%), Query Frame = 0 
Query:    1 MPSLAGDGSGRVVSLTSLCLEAMVAAWESHGVTSGGG-----RGGYLPGAYHMPHELCARLLRLLVSSKKLTAFTLSGFLSPAALEVDLSGCSYVPKSVFKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDAGFHLQQSPFFVLVGAVSLETISVQGCPQVTGELVLHLRKVCRNLKELDLARCKSVTTVSVRRLFDSCPSLESLNLSFLEGVADEAFEGLPAIDMGAAVPPSTXXXXXXXXXXXXXXXXXXXPLSASRLLSRQPQA------SAAAAGDGRFGLQDDERQRHQPDDGALPFL--TXXXXXXXXXFTATVPGAPASMSSPSSLPSLRHLNLGRCRGVTDLALARVAGAF 364
            MPSL GDGSGRV SLTSLCLEAMVAAWESHGVTSGG      RGGYLPGAYHMPHELCARLLRLLVSSKKLTAFTLSGFLSPAALEVDLSGCSYVPKSVFKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VTDAGFHLQQSPF+VL+GAVSLETISVQGCPQ                                                           GLPAIDMG AV PS+                   PLS SR +S QPQA      + AAAGDGRFG+QD ERQRHQPDDG LPFL     XXXXXXX T TVP AP  MSS SSLPSLRHLNLGRCRGVTDLALARVAGAF
Sbjct:    1 MPSLTGDGSGRVASLTSLCLEAMVAAWESHGVTSGGXXXXXXRGGYLPGAYHMPHELCARLLRLLVSSKKLTAFTLSGFLSPAALEVDLSGCSYVPKSVFKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVTDAGFHLQQSPFYVLLGAVSLETISVQGCPQ-----------------------------------------------------------GLPAIDMGVAVAPSSAIVGPPNEDL---------PLSGSRPVSPQPQALHGNAAATAAAGDGRFGMQD-ERQRHQPDDGGLPFLPSAAAXXXXXXXVTVTVPVAP--MSSSSSLPSLRHLNLGRCRGVTDLALARVAGAF 306
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BLAST of mRNA_E_fasciculatus_S2_contig693.15066.1 vs. uniprot
Match: A0A7S3M3M2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3M2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.550e-18
Identity = 46/99 (46.46%), Postives = 69/99 (69.70%), Query Frame = 0 
Query:  142 VTDAGFHLQQSPFFVLVGAVSLETISVQGCPQVTGELVLHLRKVCRNLKELDLARCKSVTTVSVRRLFDSCPSLESLNLSFLEGVADEAFEGLPAIDMG 240
            +TD+ F   +SPF  L+G +SLE IS+QGCPQ+TGE++  L K CR L  L+L++CK+V +  ++ +F+    L SLNLSF+E ++DEAF  +P +  G
Sbjct:   12 ITDSAFDFCESPFERLLGCLSLEAISLQGCPQITGEIITTLNKNCRRLNYLNLSQCKNVKSPKIQHIFEH-NQLLSLNLSFIEDISDEAFVLMPLLGSG 109
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BLAST of mRNA_E_fasciculatus_S2_contig693.15066.1 vs. uniprot
Match: A0A485LDC8_9STRA (Aste57867_19056 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDC8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.120e-13
Identity = 91/224 (40.62%), Postives = 124/224 (55.36%), Query Frame = 0 
Query:    9 SGRVVSLTSLCLEAMVAAWESHGVTSGGGRGGYLPGAYHMPHELCARLLRLLVSSKKLTAFTLSGFLSPAALEVDLSGCSYVPKSVFKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDAGFHLQQSPFFVLVGAVSLETISVQGCPQVTGELVLHLRKVCRNLKELDLARCKSVTTVSVRRLFDSCPSLES--LNLSFLEGVADEA 230
            S  V SL  LC++ +V A  S   T         P    +P EL   LL  L  + ++T   LS FLS +   + L GC  + KSV +Q+                XXXXXXXXXXXXXXXXXXXXXXXXX  +TDA F   QS F+ L   +SL+ +S+ GC Q+T  L++H+ K  R+L +L+L+RCK +T+  ++ L  S   L    LNLSF + + D+A
Sbjct:   29 SKEVPSLIDLCVQTLVRADGSPMRTVDQ----LFP---RLPEELAQCLLAALAENDRVTDDRLSAFLSISRRVIRLDGCGGIRKSVLRQIPFRCPHLTYLDLSNCIXXXXXXXXXXXXXXXXXXXXXXXXXRHITDAAFQPDQSLFYPLRACLSLKVLSLAGCSQITHSLIVHILKAYRSLVDLNLSRCKRITSECIKMLLTSSLHLRLRVLNLSFTD-IGDDA 244
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BLAST of mRNA_E_fasciculatus_S2_contig693.15066.1 vs. uniprot
Match: A0A835Z4K5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K5_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 6.560e-8
Identity = 28/44 (63.64%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:  143 TDAGFHLQQSPFFVLVGAVSLETISVQGCPQVTGELVLHLRKVC 186
            +D+GF+ +QSPF +LVG VSLET+SV GCPQ+TG LV++L K+C
Sbjct:   78 SDSGFNQKQSPFQLLVGCVSLETLSVSGCPQITGRLVVYLHKLC 121
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig693.15066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FUK7_ECTSI4.620e-10468.70Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A7S3M3M2_9STRA4.550e-1846.46Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A485LDC8_9STRA7.120e-1340.63Aste57867_19056 protein n=1 Tax=Aphanomyces stella... [more]
A0A835Z4K5_9STRA6.560e-863.64Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 160..185
e-value: 81.0
score: 7.4
coord: 338..363
e-value: 0.011
score: 24.9
coord: 416..441
e-value: 3.1E-4
score: 30.1
coord: 212..237
e-value: 33.0
score: 10.5
coord: 364..389
e-value: 1.0
score: 18.4
coord: 102..127
e-value: 14.0
score: 13.4
coord: 442..467
e-value: 0.039
score: 23.1
coord: 390..415
e-value: 2.3E-4
score: 30.5
coord: 128..152
e-value: 17.0
score: 12.9
coord: 468..493
e-value: 310.0
score: 2.9
coord: 186..211
e-value: 0.0015
score: 27.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 40..239
e-value: 1.0E-28
score: 102.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 329..499
e-value: 2.6E-38
score: 133.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 390..413
e-value: 0.76
score: 10.0
coord: 186..205
e-value: 1.4
score: 9.2
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 337..483
coord: 82..230
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 154..482

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig693contigE_fasciculatus_S2_contig693:383..5721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig693.15066.1mRNA_E_fasciculatus_S2_contig693.15066.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig693 383..6899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig693.15066.1 ID=prot_E_fasciculatus_S2_contig693.15066.1|Name=mRNA_E_fasciculatus_S2_contig693.15066.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=503bp
MPSLAGDGSGRVVSLTSLCLEAMVAAWESHGVTSGGGRGGYLPGAYHMPH
ELCARLLRLLVSSKKLTAFTLSGFLSPAALEVDLSGCSYVPKSVFKQLGF
SCPRIVHLNLSMCSQVNNAIVRSVLQGCSALRQLYLDGCRHVTDAGFHLQ
QSPFFVLVGAVSLETISVQGCPQVTGELVLHLRKVCRNLKELDLARCKSV
TTVSVRRLFDSCPSLESLNLSFLEGVADEAFEGLPAIDMGAAVPPSTATG
GPPPRAAGGGGIDEERPLSASRLLSRQPQASAAAAGDGRFGLQDDERQRH
QPDDGALPFLTSGGGGGGGGFTATVPGAPASMSSPSSLPSLRHLNLGRCR
GVTDLALARVAGAFPGLEGLHLDHCLGVTDAGVAALAAGCRGLRALGLRN
CGQITDSALEALSVSCPSLEWLDVSWCGGVTDRGFERLVEGCPGLEEVQA
VWCEGITDATLLTLSRVCAHLEAVHIAFCEGVSAAAAVALRATGVEVVVL
PR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR006553Leu-rich_rpt_Cys-con_subtyp