prot_E_fasciculatus_S2_contig69.15025.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig69.15025.1
Unique Name	prot_E_fasciculatus_S2_contig69.15025.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	324

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A6H5JV91_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV91_9PHAE)

HSP 1 Score: 498 bits (1282), Expect = 1.030e-175
Identity = 314/323 (97.21%), Postives = 318/323 (98.45%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFNGARGRAQPFGAGGXXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQPXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGVPDGQAQYTQAEYAAAVRNQQQAQAQXXXXXXXXXXXXARNPAEGTYGSQPY 323
            MKDKYTGHPRGFGFIKFED+TVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQED+VVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPF G RGRAQPFGAGG XXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQ XXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYG+PDGQAQYTQAEYAAA+RNQQQAQAQXXXXXXXXXXXX RNPAEGTYGSQPY
Sbjct:    1 MKDKYTGHPRGFGFIKFEDVTVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAQXXXXXXXXXXXXXRNPAEGTYGSQPY 323

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI)

HSP 1 Score: 499 bits (1285), Expect = 1.970e-173
Identity = 314/323 (97.21%), Postives = 318/323 (98.45%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFNGARGRAQPFGAGGXXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQPXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGVPDGQAQYTQAEYAAAVRNQQQAQAQXXXXXXXXXXXXARNPAEGTYGSQPY 323
            MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQED+VVH+IMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPF G RGRAQPFGAGG XXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQ XXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYG+PDGQAQYTQAEYAAA+RNQQQAQAQ XXXXXXXXXXXARNPAEGTYGSQPY
Sbjct:  180 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAGGSSPALGGGVAAPFTGTRGRAQPFGAGGRXXXXXXXXXXSFPYNNGGAPFNGNAAASYGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGAAYSAEGGTTAGSFPVTLPPQAAYGLPDGQAQYTQAEYAAAMRNQQQAQAQVXXXXXXXXXXXARNPAEGTYGSQPY 502

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.410e-67
Identity = 113/151 (74.83%), Postives = 131/151 (86.75%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRG 150
            MKDKYTG PRGFGFIKFED +VLD +L+Q EH IDG+VVDVKRAVPKSEAPGP+ R++R A+ NK+FVGGLAP+V  AEFR+YFE FG V DAVVMFDRQTQRSRGFGFVTFQ++SVV  ++MGTHE+NGKMVEVK AEPKE+R   +P G
Sbjct:   50 MKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGPA-RATRQADFNKVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLMGTHELNGKMVEVKTAEPKESRRNASPGG 199

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A836CMD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD2_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.880e-61
Identity = 102/130 (78.46%), Postives = 114/130 (87.69%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQ-EHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEING 129
            MKDKYTG PRGFGFIKFED  V+D +L+Q EH IDG+ VDVKRAVPKSEAPGPS R++RPA+TNK+FVGGLAP+V +AEFR YFE FG V DAVVMFDRQT RSRGFGFVTFQEDSVV  ++MGTHEING
Sbjct:   55 MKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPS-RTARPADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEING 183

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: F0WG76_9STRA (Uncharacterized protein AlNc14C88G5606 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG76_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.710e-49
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRPA-----------ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRGEFAG 154
            MKDK++G PRGFGF+ F D+ VLD +L + H IDG+ V+VKRA+P+ + A GPS   S  A           E+ K+FVGGL P+V   +FR+YFE FG + DAVVMFDR+TQRSRGFGFVTF+E+  V E++  THE++GK+VE+KRAEPKE RSG    G + G
Sbjct:  134 MKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHELHGKVVEIKRAEPKEARSGGGYSGGYGG 299

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A0P1AWA8_PLAHL (Heterogeneous nuclear ribonucleoprotein 1-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWA8_PLAHL)

HSP 1 Score: 171 bits (432), Expect = 6.710e-47
Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSS-RSSRPA-------------ETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSG 145
            MKDKYTG PRGFGF+ F D + +D +L + H +DG+ V+VKRA+P+   APG S  R +R               E+ KIFVGGLAPT+   +FR YFE FG + DAVVM DR TQRSRGFGF+TF+++S V E++   HEI+GK VE+KRAEPKE RSG
Sbjct:  159 MKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERTAPGSSEFRGARSGYSSNGXXXXGIFTESKKIFVGGLAPTIAEQDFRHYFEEFGRITDAVVMIDRDTQRSRGFGFITFEDESSVAEVISKNHEIHGKSVEIKRAEPKEARSG 318

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A6A3XJL2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XJL2_9STRA)

HSP 1 Score: 174 bits (440), Expect = 7.270e-47
Identity = 91/169 (53.85%), Postives = 112/169 (66.27%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRP-----------------------AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSG 145
            MKDKYTG PRGFGF+ FED T +D +L + H +DG+ V+VKRA+P+ + APG  S   R                         E  KIFVGGLAPTV   +FR+YFE FG + DAVVM DR TQRSRGFGF+TF+E+S V E++  +HEI+GK VE+KRAEPKE RSG
Sbjct:  156 MKDKYTGQPRGFGFVTFEDATAIDRVLEETHMLDGRSVEVKRAIPREKTAPGGGSSDFRGXXXXXXXXXXXXXXXXXXXXXXFTEQKKIFVGGLAPTVAERDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVLSKSHEIHGKTVEIKRAEPKEARSG 324

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A484E761_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E761_BRELC)

HSP 1 Score: 174 bits (440), Expect = 8.780e-47
Identity = 88/154 (57.14%), Postives = 110/154 (71.43%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPS--------SRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSG 145
            MKDKYTG PRGFGF+ F D   +D +L + H +DG+ V+VKRA+P+   APGPS        + S    E  KIFVGGLAPTV   +FR YFE FG + DAVVM DR TQRSRGFGF+TF+++S V E++  +HEI+GK VE+KRAEPKE R+G
Sbjct:  151 MKDKYTGQPRGFGFVTFADALAIDRVLEETHTLDGRSVEVKRAIPRERTAPGPSDFRGGRGNNSSGGYTEQKKIFVGGLAPTVAEEDFRHYFEEFGKITDAVVMIDRDTQRSRGFGFITFEDESSVVEVISKSHEIHGKTVEIKRAEPKEARAG 304

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A6A3KEW8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3KEW8_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.670e-46
Identity = 91/167 (54.49%), Postives = 112/167 (67.07%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRP---------------------AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSG 145
            MKDKYTG PRGFGF+ FED T +D +L + H +DG+ V+VKRA+P+ + APG  S   R                       E  KIFVGGLAPTV   +FR+YFE FG + DAVVM DR TQRSRGFGF+TF+E+S V E++  +HEI+GK VE+KRAEPKE RSG
Sbjct:  156 MKDKYTGQPRGFGFVTFEDATAIDRVLEETHMLDGRSVEVKRAIPREKTAPGGGSSDFRGXXXXXXXXXXXXXXXXXXXXFTEQKKIFVGGLAPTVAERDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVLSKSHEIHGKTVEIKRAEPKEARSG 322

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BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Match: A0A6A3TQ19_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TQ19_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.700e-46
Identity = 91/169 (53.85%), Postives = 112/169 (66.27%), Query Frame = 0

Query:    1 MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSE-APGPSSRSSRP-----------------------AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSG 145
            MKDKYTG PRGFGF+ FED T +D +L + H +DG+ V+VKRA+P+ + APG  S   R                         E  KIFVGGLAPTV   +FR+YFE FG + DAVVM DR TQRSRGFGF+TF+E+S V E++  +HEI+GK VE+KRAEPKE RSG
Sbjct:  156 MKDKYTGQPRGFGFVTFEDATAIDRVLEETHMLDGRSVEVKRAIPREKTAPGGGSSDFRGXXXXXXXXXXXXXXXXXXXXXXFTEQKKIFVGGLAPTVAERDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFITFEEESSVAEVLSKSHEIHGKTVEIKRAEPKEARSG 324

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig69.15025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JV91_9PHAE	1.030e-175	97.21	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FW71_ECTSI	1.970e-173	97.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZAL5_9STRA	2.410e-67	74.83	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CMD2_9STRA	1.880e-61	78.46	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
F0WG76_9STRA	2.710e-49	54.82	Uncharacterized protein AlNc14C88G5606 n=1 Tax=Alb...	[more]
A0A0P1AWA8_PLAHL	6.710e-47	55.00	Heterogeneous nuclear ribonucleoprotein 1-like iso...	[more]
A0A6A3XJL2_9STRA	7.270e-47	53.85	Uncharacterized protein n=1 Tax=Phytophthora fraga...	[more]
A0A484E761_BRELC	8.780e-47	57.14	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A6A3KEW8_9STRA	1.670e-46	54.49	Uncharacterized protein n=2 Tax=Phytophthora fraga...	[more]
A0A6A3TQ19_9STRA	1.700e-46	53.85	Uncharacterized protein n=7 Tax=Phytophthora TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 64..135 e-value: 7.7E-17 score: 71.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 65..115 e-value: 1.5E-11 score: 43.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 63..139 score: 15.92
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 48..155 e-value: 1.0E-22 score: 82.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..47 e-value: 3.2E-9 score: 38.9
None	No IPR available	PANTHER	PTHR11176:SF13	GENE 17190-RELATED	coord: 2..313
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 2..313
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 1..57
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 52..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig69	contig	E_fasciculatus_S2_contig69:20768..24228 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig69.15025.1	mRNA_E_fasciculatus_S2_contig69.15025.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig69 20768..24302 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig69.15025.1 ID=prot_E_fasciculatus_S2_contig69.15025.1|Name=mRNA_E_fasciculatus_S2_contig69.15025.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=324bp
MKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAP
GPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQT
QRSRGFGFVTFQEDSVVHEIMMGTHEINGKMVEVKRAEPKENRSGRAPRG
EFAGGSSPALGGGVAAPFNGARGRAQPFGAGGRGAGAGYGGGGSFPYNNG
GAPFNGNAAASYGQQPAYGYAAAGYGYNGQMYSAPTPYGYNGRGAGAAYS
AEGGTTAGSFPVTLPPQAAYGVPDGQAQYTQAEYAAAVRNQQQAQAQVQQ
HAQAQAQQQARNPAEGTYGSQPY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR037366	BOULE/DAZ
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom