prot_E_fasciculatus_S2_contig6821.14947.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6821.14947.1
Unique Nameprot_E_fasciculatus_S2_contig6821.14947.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length95
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6821.14947.1 vs. uniprot
Match: D7FPS5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS5_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.060e-45
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:    1 RSAYAFRRIKSLKLASNHLICFEEDAALELTSLERLDVSDNELVSIDWVALVETLRFLDCSKNRLSALPTFARALASPPRLAEVIAEGNTV 91
            RSAYAFRR+KSLKLASNHLI FEEDAALELTSLERLDVSDNELVSIDWV LVETLRFLDCSKNRLSALPTFARALA+ PRLAEVIAEGNTV
Sbjct:  367 RSAYAFRRMKSLKLASNHLINFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANLPRLAEVIAEGNTV 457
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BLAST of mRNA_E_fasciculatus_S2_contig6821.14947.1 vs. uniprot
Match: A0A6H5KZ74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ74_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.500e-45
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0 
Query:    1 RSAYAFRRIKSLKLASNHLICFEEDAALELTSLERLDVSDNELVSIDWVALVETLRFLDCSKNRLSALPTFARALASPPRLAEVIAEGNTV 91
            RS YAF+R+KSLKLASNHL+ FEEDAALELTSLERLDVSDNELVSIDWV LVETLRFLDCSKNRLSALPTFARALA+PPRLAEVIAEGNTV
Sbjct:  407 RSGYAFQRMKSLKLASNHLMSFEEDAALELTSLERLDVSDNELVSIDWVGLVETLRFLDCSKNRLSALPTFARALANPPRLAEVIAEGNTV 497
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6821.14947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPS5_ECTSI1.060e-4594.51Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZ74_9PHAE1.500e-4592.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 7..65
e-value: 1.1E-6
score: 28.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..92
e-value: 1.9E-12
score: 48.8
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 6..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6821contigE_fasciculatus_S2_contig6821:4435..5734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6821.14947.1mRNA_E_fasciculatus_S2_contig6821.14947.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6821 4435..5734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6821.14947.1 ID=prot_E_fasciculatus_S2_contig6821.14947.1|Name=mRNA_E_fasciculatus_S2_contig6821.14947.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=95bp
RSAYAFRRIKSLKLASNHLICFEEDAALELTSLERLDVSDNELVSIDWVA
LVETLRFLDCSKNRLSALPTFARALASPPRLAEVIAEGNTVGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt