prot_E_fasciculatus_S2_contig6815.14940.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6815.14940.1
Unique Nameprot_E_fasciculatus_S2_contig6815.14940.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length235
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Match: A0A6H5JWS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 9.250e-95
Identity = 149/219 (68.04%), Postives = 162/219 (73.97%), Query Frame = 0
Query:    1 MPSHNHPQQVIYIVGRGAPGGAGAGCCGVPPEASRAVTAARRCAILSIVVHVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAVCDVLAVVTWITRDDKLFESDXXXXXXXXXXXXXXXXXSDSIIFVWLAVASSLGAIAMGLGAIFTFKAVFGWKHVGDTAVPHIPVAPQPAPGFTNQHQSQQESKTAELGLTPPAAHPRTP 219
            MP HNH  QVIY VG GAPGG G GCCGVPPEA RAVTAAR CAILSIV+H ISF+LGG     QR AC  AFV+GGLLLC YER MY IG +GFALCAV DVLAV+ WITRDD++F+SD                 SDS I +WLAV   LGAIAMGLGAIFTF A+F WK+ G TA+PH+PVAPQP   FT Q QSQQESKTAELGL PP AHPRTP
Sbjct:    1 MPYHNHRHQVIYNVGGGAPGG-GPGCCGVPPEAPRAVTAARGCAILSIVIHAISFYLGGGFFVWQRNACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVAPQPTFDFTKQPQSQQESKTAELGLAPPTAHPRTP 218          
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Match: D7FYM8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.980e-34
Identity = 81/180 (45.00%), Postives = 97/180 (53.89%), Query Frame = 0
Query:   40 ARRCAILSIVVHVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAVCDVLAVVTWITRDDKLFESDXXXXXXXXXXXXXXXXXSDSIIFVWLAVASSLGAIAMGLGAIFTFKAVFGWKHVGDTAVPHIPVAPQPAPGFTNQHQSQQESKTAELGLTPPAAHPRTP 219
            AR C  LSIV+H IS F+ G     QR A    F VGGL+LCIY++ MYAIG VGFA+CA+ D+ AV+ WIT DD + E D                 S+    +W A+   LGAI MGLGAIF+F AVF W+    TA+PH                   E KT ELGL P AAHP  P
Sbjct:   14 ARLCIALSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGS-----------SEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTAMPH-------------------EGKTVELGLAPIAAHPGAP 163          
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Match: A0A6H5KAL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.490e-18
Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   40 ARRCAILSIVVHVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAVCDVLAVVTWITRDDKLFESDXXXXXXXXXXXXXXXXXSDSIIFVWLAVASSLGAIAMGLGAIFTFKAVFGWKHVGDTAVP------HIPVAPQPAPGFTNQHQSQQE 201
            AR CAI +I+VHV +  + G L   Q  A + AF++ G+LLC+Y+RC Y  G + FA+ AV D+L +V WI   + L +   XXXXXXXXXXX         + +W A+   LGA+++GLGA+F+F ++  WK  G  A        H+P APQ     T Q Q++ +
Sbjct:    9 ARACAICAIIVHVGALLVFGWLWVWQWIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQDDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPAAAMAVTTAHVP-APQNTVSATYQPQNEHQ 175          
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Match: D7G5D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D4_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.730e-9
Identity = 52/185 (28.11%), Postives = 83/185 (44.86%), Query Frame = 0
Query:   25 GC-CGVPPEASRAVTAARRCAILSIVVHVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAVCDVLAVVTWI---TRDDKLFESDXXXXXXXXXXXXXXXXXSDSIIFVWLAVASSLGAIAMGLGAIFTFKAVFGWKHVG--DTAVPHIPVAPQ---PAPGFTNQHQSQQ 200
            GC C VPP  S  V  +R   I +IVVH I+    G ++     A L +F++GG+LLC + +C Y +    F L  + D++++  WI   T D+  +                      S    W A+ ++LGA++  +  +F F A+  W+  G  D   P +P   Q   P  G   +H + Q
Sbjct:   24 GCSCTVPPNVSGHVRGSRGATIATIVVHAIALLAFGWILWGIWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVSMAAWIAYATSDNYYYNGSEL-----------------SSAVGWFALPAALGALSFIVAIVFIFLAICNWEKSGAPDAMGPPMPGGAQVMAPNHGVQMKHHAPQ 191          
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Match: A0A6H5K1J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.180e-6
Identity = 38/138 (27.54%), Postives = 62/138 (44.93%), Query Frame = 0
Query:   41 RRCAILSIVVHVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAVCDVLAVVTWI---TRDDKLFESDXXXXXXXXXXXXXXXXXSDSIIFVWLAVASSLGAIAMGLGAIFTFKAVFGWKHVG 175
            R   I SIVVH I+    G +  S   A L +F++GG+LLC + +C Y +    F L  + D++A+  WI   T D+  +                           W A+ ++LGA++  +  +F F A+  W+  G
Sbjct:   29 RGATIASIVVHAIALLAFGWIAWSVWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVAMAAWIALATSDNYYYNGTQLTSAVG-----------------WFALPAALGALSFIIAIVFIFLAICNWEKSG 149          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6815.14940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JWS2_9PHAE9.250e-9568.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYM8_ECTSI1.980e-3445.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KAL4_9PHAE4.490e-1840.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5D4_ECTSI1.730e-928.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1J6_9PHAE4.180e-627.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..141
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 66..83
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 43..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6815contigE_fasciculatus_S2_contig6815:1989..8039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6815.14940.1mRNA_E_fasciculatus_S2_contig6815.14940.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6815 1989..8039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6815.14940.1 ID=prot_E_fasciculatus_S2_contig6815.14940.1|Name=mRNA_E_fasciculatus_S2_contig6815.14940.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=235bp
MPSHNHPQQVIYIVGRGAPGGAGAGCCGVPPEASRAVTAARRCAILSIVV
HVISFFLGGALITSQRYACLTAFVVGGLLLCIYERCMYAIGIVGFALCAV
CDVLAVVTWITRDDKLFESDDDYYTLFDDDDTQSEESSDSIIFVWLAVAS
SLGAIAMGLGAIFTFKAVFGWKHVGDTAVPHIPVAPQPAPGFTNQHQSQQ
ESKTAELGLTPPAAHPRTPPPVYHPQSPPPAYRR*
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