prot_E_fasciculatus_S2_contig6784.14907.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6784.14907.1
Unique Nameprot_E_fasciculatus_S2_contig6784.14907.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length324
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6784.14907.1 vs. uniprot
Match: D8LHF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF1_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 4.370e-25
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:  237 VCRVLPLLRRIPLPPRLIKLHFQGGFPTGFLDNAAFPASLKELSLGDGFDEGLQGVRW 294
            VCRVLPLLRR PL PRLIKLHFQGGFPTGFLDNAAFPASLKELSLGDGF+EGLQGVRW
Sbjct:  670 VCRVLPLLRRTPLSPRLIKLHFQGGFPTGFLDNAAFPASLKELSLGDGFNEGLQGVRW 727
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BLAST of mRNA_E_fasciculatus_S2_contig6784.14907.1 vs. uniprot
Match: A0A6H5JL40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL40_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.050e-24
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:  237 VCRVLPLLRRIPLPPRLIKLHFQGGFPTGFLDNAAFPASLKELSLGDGFDEGLQGVRW 294
            VCRVLPLLRR PL PRLIKLHFQGGFPTGFLDNAAFPASLKEL+LGDGF+EGLQGVRW
Sbjct:  633 VCRVLPLLRRTPLSPRLIKLHFQGGFPTGFLDNAAFPASLKELTLGDGFNEGLQGVRW 690
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6784.14907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHF1_ECTSI4.370e-2594.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL40_9PHAE1.050e-2493.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 86..128
e-value: 1.8E-4
score: 21.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 8..127
coord: 95..254
coord: 162..323
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 8..127
coord: 95..254
coord: 162..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6784contigE_fasciculatus_S2_contig6784:141..8206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6784.14907.1mRNA_E_fasciculatus_S2_contig6784.14907.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6784 141..8208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6784.14907.1 ID=prot_E_fasciculatus_S2_contig6784.14907.1|Name=mRNA_E_fasciculatus_S2_contig6784.14907.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=324bp
SVDRVVWPARLRHLSLGFHFNMPVAGVRWPEGLRTLAFGDRFNQAIDEVA
WPDGLERMSFGSAFNRPVHLTAWPKALKELAFGRGFNKALEGVEWPSGLR
KLSFGAAFNQEVESVRWPRMLEEVVFGNAFDREIERTVFPTGLRRMVFGT
RFNRTVERVVWPAGLEELTLGKSFNQPVELASWPACLRTLRFGRSFDQAL
EGVSWPGSLRVVSLGWEFEQPLRGVKWPDALEELSLVCRVLPLLRRIPLP
PRLIKLHFQGGFPTGFLDNAAFPASLKELSLGDGFDEGLQGVRWPVGLEK
LKLGRTYRQRVDTVVWPQGIEQLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP