prot_E_fasciculatus_S2_contig6758.14875.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig6758.14875.1
Unique Name	prot_E_fasciculatus_S2_contig6758.14875.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	271

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig6758.14875.1 vs. uniprot
Match: D7G2W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W5_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 8.120e-121
Identity = 216/273 (79.12%), Postives = 222/273 (81.32%), Query Frame = 0

Query:    1 MQGFADSRSRLEGFLAGDSGGGGPKALDVGFDVGSTA-DEFGDVVXXXXXXXXXXXXXXXXXXXXXXXGSEVGGVAAEGRGDEAVQAA-MGEEEGGDIGQGDIDGILSEATDCFLNFVDFVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRVVLGLPAFPAAAPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAESISGALGLFSPSFQGLEKGGYDAGGG-LKEL 270
            MQGFADSRSRLE FLAGD G  G  ALD GFD GSTA DEFGDV                         ++V GVA EGRGDEAV AA MGEEEGGD+G    DG+LSEATD FLNFVD VVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRV+LGLPAFPAA PTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLA SISGALGLFSPSFQG E+G Y  GGG LKEL
Sbjct:  307 MQGFADSRSRLELFLAGDGGSEGRNALDEGFDAGSTAADEFGDV--GDAYSSSSGSFESAENTEDSEEDAKVDGVA-EGRGDEAVLAATMGEEEGGDVGH---DGMLSEATDWFLNFVDMVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRVMLGLPAFPAANPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSGGGGDLKEL 573

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig6758.14875.1 vs. uniprot
Match: A0A6H5JKL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL1_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 6.780e-117
Identity = 233/277 (84.12%), Postives = 239/277 (86.28%), Query Frame = 0

Query:    1 MQGFADSRSRLEGFLAGDSGGGGPKALDVGFDVGSTA-DEFGDVVXXXXXXXXXXXXXXXXXXXXXXX--GSEVGGVAAEGRGDEAVQAA-MGEEEGGDIGQGDIDGILSEATDCFLNFVDFVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRVVLGLPAFPAAAPTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAESISGALGLFSPSFQGLEKGGYDAGGG---LKEL 270
            MQGFADSRSRLE FLAGD    G KALDVGFD GSTA DEFGDVV XXXXXXXXXXXXXXXXXXXXXX   ++V  VA E RGDEAV AA MGEEE GD      DG+LSEATD FLNFVD VVGWAHYLSAVSMPW GGVGEISCVSAI+LA+FVRLVVAVAFSGVRVVLGLPAFPAA  TSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLA SISGALGLFSPSFQG E+G Y  GGG   LKEL
Sbjct:   71 MQGFADSRSRLEFFLAGDGVSEGRKALDVGFDAGSTAADEFGDVVDXXXXXXXXXXXXXXXXXXXXXXEEDAKVDDVA-ERRGDEAVLAATMGEEEAGD------DGLLSEATDWFLNFVDLVVGWAHYLSAVSMPWRGGVGEISCVSAIHLALFVRLVVAVAFSGVRVVLGLPAFPAAQSTSKPGMVMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSTGGGGGGLKEL 340

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig6758.14875.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig6758.14875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G2W5_ECTSI	8.120e-121	79.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKL1_9PHAE	6.780e-117	84.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 203..207
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 208..229
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..172
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 173..183
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 230..270
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 184..202
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..145
None	No IPR available	TMHMM	TMhelix		coord: 183..205
None	No IPR available	TMHMM	TMhelix		coord: 146..168

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig6758	contig	E_fasciculatus_S2_contig6758:1109..5873 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig6758.14875.1	mRNA_E_fasciculatus_S2_contig6758.14875.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig6758 360..7229 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig6758.14875.1 ID=prot_E_fasciculatus_S2_contig6758.14875.1|Name=mRNA_E_fasciculatus_S2_contig6758.14875.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=271bp
MQGFADSRSRLEGFLAGDSGGGGPKALDVGFDVGSTADEFGDVVDVVDVD
SSSPSFESVEDTEDGEAGSEVGGVAAEGRGDEAVQAAMGEEEGGDIGQGD
IDGILSEATDCFLNFVDFVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAI
FVRLVVAVAFSGVRVVLGLPAFPAAAPTSKPGMVMGMVLATVPTLGKVLA
WGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAESISGALGLFS
PSFQGLEKGGYDAGGGLKEL*