prot_E_fasciculatus_S2_contig6728.14846.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6728.14846.1
Unique Nameprot_E_fasciculatus_S2_contig6728.14846.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length447
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6728.14846.1 vs. uniprot
Match: A0A6H5JAG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG1_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 2.860e-182
Identity = 352/412 (85.44%), Postives = 365/412 (88.59%), Query Frame = 0 
Query:    1 MLTGRAFIDETATAVSDXXXXXXXXXXXXXXXXXXXXXXXXXXRSSAIPTADRLSLRRAGSGGNPLLGPQPQQEGGNVDGDEESSSNPSLLERAEVDAILSEAASASGGAGAKSDAHLDDAAAVAAAVREGGGESYETEVADGLRALMGEIGFGEEEVAAYSLEELLLLREELEKEWAAAETEEASPSLEAEKRGEELRRAGSAVKQEEVXXXXXXXXXXXXXXXXDAEPPWEHHSLSLQERLGLSDEEVEKLRRSPRSGLALSGGII-GSDSGGAAADAFPGLDVDGGRGGTVDGVKVSPGSGVVDYGREAAAAAAAASRMKERMTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAVASWLQGGLGLSADDVGKMIRKNPAIVACSIVHNLRPKLR 411
            MLTGRAF+DETAT VSDXXXXXXXXXXXXXXXXXXXXXXXXXX S A PTA RLSLR+AGSGG+ LLGPQP               NPSLLER+EVDAILSEAASASGGAG + DA+LDDAAAVAA VREGGGESY+TEV DGLRALMGEIGFG+EEVAAYSLEELLLLREELEKEWAAAETEE SPSL+ EKRG ELRRAGSA       XXXXXXXXXXXXX  DAEPPWE HSLSLQERLGLSDEEVEKLRRSPRSGLALSGG++  SDS GAAADA PGLD  GGRGGT DGVKVSPGSGVV+YGREAAAAAAAASRMKER+TGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAV SWLQGGLGLS DDVGKMIRKNPAIVACSIVHNLRPKLR
Sbjct:    1 MLTGRAFLDETAT-VSDXXXXXXXXXXXXXXXXXXXXXXXXXXXS-ANPTAGRLSLRQAGSGGDQLLGPQPXXXXXXXXXXXXXX-NPSLLERSEVDAILSEAASASGGAGVEGDANLDDAAAVAAGVREGGGESYKTEVEDGLRALMGEIGFGQEEVAAYSLEELLLLREELEKEWAAAETEEVSPSLKTEKRGGELRRAGSA------EXXXXXXXXXXXXXDRDAEPPWERHSLSLQERLGLSDEEVEKLRRSPRSGLALSGGVLDSSDSRGAAADASPGLDA-GGRGGTADGVKVSPGSGVVEYGREAAAAAAAASRMKERLTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAVTSWLQGGLGLSTDDVGKMIRKNPAIVACSIVHNLRPKLR 402
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BLAST of mRNA_E_fasciculatus_S2_contig6728.14846.1 vs. uniprot
Match: D7G0R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R0_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 6.510e-181
Identity = 355/412 (86.17%), Postives = 369/412 (89.56%), Query Frame = 0 
Query:    1 MLTGRAFIDETATAVSDXXXXXXXXXXXXXXXXXXXXXXXXXXRSSAIPTADRLSLRRAGSGGNPLLGPQPQQEGGNVDGDEESSSNPSLLERAEVDAILSEAASASGGAGAKSDAHLDDAAAVAAAVREGGGESYETEVADGLRALMGEIGFGEEEVAAYSLEELLLLREELEKEWAAAETEEASPSLEAEKRGEELRRAGSAVKQEEVXXXXXXXXXXXXXXXX-DAEPPWEHHSLSLQERLGLSDEEVEKLRRSPRSGLALSGGIIGSDSGGAAADAFPGLDVDGGRGGTVDGVKVSPGSGVVDYGREAAAAAAAASRMKERMTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAVASWLQGGLGLSADDVGKMIRKNPAIVACSIVHNLRPKLR 411
            MLTGRAF+DETATA SDXXXXXXXXXXXXXXXXXXXXXXXX  RSSA PTA R+SLRRAGSGG+PLLGP+P +EGGN DG EESSSNPSLLER+EVDAILSEA SASGGAGA+ DA LDDAAAVAAAVREGG ES+ETEV DG+RALMGEIGFGEEEVAAYSLEELLLLREELEKEWAAAETEE SPSL+ E                  XXXXXXXXXXXXXXX  DAEPPWEHHSLSLQERLGLSDEEVE+LRRSPRSGLAL GG + SD GGAAADA PGLD  GGRGGT DGVKVSPGSGVV+YGREAAAAAAAASRMKERMTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAVASWLQGGLGLSADDVGKMIRK+PAIVACSIVHNLRPKLR
Sbjct:    1 MLTGRAFLDETATA-SDXXXXXXXXXXXXXXXXXXXXXXXXA-RSSANPTAGRISLRRAGSGGDPLLGPRPPREGGNGDG-EESSSNPSLLERSEVDAILSEATSASGGAGAEGDASLDDAAAVAAAVREGGRESHETEVEDGIRALMGEIGFGEEEVAAYSLEELLLLREELEKEWAAAETEEVSPSLKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAEPPWEHHSLSLQERLGLSDEEVEQLRRSPRSGLALRGGALDSDCGGAAADASPGLDA-GGRGGTADGVKVSPGSGVVEYGREAAAAAAAASRMKERMTGRSAGGPQTAVGYLLGELRMRPEEVKDAVLRWPALMSLSKRGPHAVASWLQGGLGLSADDVGKMIRKHPAIVACSIVHNLRPKLR 408
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6728.14846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAG1_9PHAE2.860e-18285.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0R0_ECTSI6.510e-18186.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availableCOILSCoilCoilcoord: 198..227
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 352..383
e-value: 2900.0
score: 0.3
coord: 388..420
e-value: 1.2E-4
score: 31.5
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 341..446
e-value: 1.8E-9
score: 37.0
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 334..447
e-value: 5.2E-16
score: 60.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6728contigE_fasciculatus_S2_contig6728:261..5808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6728.14846.1mRNA_E_fasciculatus_S2_contig6728.14846.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6728 261..5808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6728.14846.1 ID=prot_E_fasciculatus_S2_contig6728.14846.1|Name=mRNA_E_fasciculatus_S2_contig6728.14846.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=447bp
MLTGRAFIDETATAVSDDDDPTAAAVAAMKKGGSGHRRRKSGGRSSAIPT
ADRLSLRRAGSGGNPLLGPQPQQEGGNVDGDEESSSNPSLLERAEVDAIL
SEAASASGGAGAKSDAHLDDAAAVAAAVREGGGESYETEVADGLRALMGE
IGFGEEEVAAYSLEELLLLREELEKEWAAAETEEASPSLEAEKRGEELRR
AGSAVKQEEVEQEEEEQQEDQEKEDRDAEPPWEHHSLSLQERLGLSDEEV
EKLRRSPRSGLALSGGIIGSDSGGAAADAFPGLDVDGGRGGTVDGVKVSP
GSGVVDYGREAAAAAAAASRMKERMTGRSAGGPQTAVGYLLGELRMRPEE
VKDAVLRWPALMSLSKRGPHAVASWLQGGLGLSADDVGKMIRKNPAIVAC
SIVHNLRPKLRWLQQEVGLSRPQSVRLVVRSPAIFAHSIDDNMAPKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF