prot_E_fasciculatus_S2_contig6727.14845.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6727.14845.1
Unique Nameprot_E_fasciculatus_S2_contig6727.14845.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length290
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6727.14845.1 vs. uniprot
Match: D7G626_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G626_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.610e-62
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0 
Query:    1 MGDDEDEDEFVEVELPDTPDCKALTAVLRLYDHARLENKRTGVLSSRPGWGLDENIENWDGVYLDTEDRVVALDVDGDPENRQAVLIGPLPVELAGMDRLEQLTMRRHRFKGR 113
            MGDD DE+EFVEVELPDTPDCKALTAVLRLYDHARLENKRTGVLSSRPGWG+DENIENWDGVYLDTEDRVVALDVDGDPENRQAVLIGPLPVELAGMDRLEQLTMRRHRFKGR
Sbjct:  358 MGDD-DEEEFVEVELPDTPDCKALTAVLRLYDHARLENKRTGVLSSRPGWGVDENIENWDGVYLDTEDRVVALDVDGDPENRQAVLIGPLPVELAGMDRLEQLTMRRHRFKGR 469
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6727.14845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G626_ECTSI1.610e-6297.35Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 145..169
e-value: 11.0
score: 12.8
coord: 267..290
e-value: 29.0
score: 9.4
coord: 243..266
e-value: 46.0
score: 7.8
coord: 219..242
e-value: 63.0
score: 6.7
coord: 121..144
e-value: 73.0
score: 6.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 221..280
e-value: 2.0E-10
score: 40.3
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 147..167
e-value: 0.17
score: 12.5
coord: 123..143
e-value: 3.9E-4
score: 20.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 221..243
score: 6.618
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 147..169
score: 6.002
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 123..145
score: 4.855
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 269..289
score: 5.348
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 245..268
score: 7.188
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 26..184
e-value: 2.1E-32
score: 113.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 185..290
e-value: 2.4E-30
score: 107.3
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 85..180
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 208..288
coord: 84..145
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 208..288
coord: 84..145
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 118..198
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 85..180
NoneNo IPR availablePANTHERPTHR27000:SF224RECEPTOR PROTEIN-TYROSINE KINASE CEPR1coord: 118..198
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 90..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6727contigE_fasciculatus_S2_contig6727:372..7200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6727.14845.1mRNA_E_fasciculatus_S2_contig6727.14845.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6727 372..7203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6727.14845.1 ID=prot_E_fasciculatus_S2_contig6727.14845.1|Name=mRNA_E_fasciculatus_S2_contig6727.14845.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=290bp
MGDDEDEDEFVEVELPDTPDCKALTAVLRLYDHARLENKRTGVLSSRPGW
GLDENIENWDGVYLDTEDRVVALDVDGDPENRQAVLIGPLPVELAGMDRL
EQLTMRRHRFKGRIPAELGQLSRLTHLNLSNCRLIGFIPPSFGDLVNLVV
LNLSWNFLSGDLPPELGRLSKLEELLVNSNAFSAGAIPPEFGKLRKLQRF
NAGHNIGLSGALPPEMSRMTALTLLDLRHNKISGKIPQLFGRLTNLQQLW
LQDNQLTDDIPAELARLPKLQMLHLANNKLSGEASAELAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR003591Leu-rich_rpt_typical-subtyp