mRNA_E_fasciculatus_S2_contig9986.17968.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V3_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.560e-56 Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 1
Query: 1 MKRYQKLLGPILLGLCAWGVVLGYCAKQGECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
MKRYQKLLGPILLGLCAWGVV GYCAKQGEC QPILDV++VLPMYNLIVFGCYALAKIGLGLIAFKDCSEDA LLDEDIQAARKDLTKRGFKF
Sbjct: 1 MKRYQKLLGPILLGLCAWGVVRGYCAKQGECRQPILDVIEVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAALLDEDIQAARKDLTKRGFKF 93
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ4_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.510e-25 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 1
Query: 124 LPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKFS 282
LPMYNLIVFGCYALAKIGLGLIAFKDCSEDA LLDEDIQAA+KDLTKRGFKFS
Sbjct: 4 LPMYNLIVFGCYALAKIGLGLIAFKDCSEDAALLDEDIQAAKKDLTKRGFKFS 56
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L1NKX0_RHICY) HSP 1 Score: 71.6 bits (174), Expect = 4.870e-12 Identity = 40/92 (43.48%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 4 KRYQKLLGPILLGLCAWGVVLGYCAKQGECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
K Q L G LLG AW L + P + LP+Y L+ FGCY+LA +G L F DC E A L EDI+AAR DL++RG +F
Sbjct: 5 KLAQWLCGVALLG-SAWAA-LALTPPGLQLPAPFRQALLPLPVYLLVAFGCYSLATVGYRLATFNDCEEAAAELQEDIRAARADLSRRGLQF 94
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: dolichol-phosphate (mannosyltransferase subunit 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145562C7) HSP 1 Score: 69.7 bits (169), Expect = 2.390e-11 Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 88 ECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKFS 282
E I +V+ LP+Y +IVFGC++LA IG + F DC E A L ++++ ARKDLT++GFKF+
Sbjct: 30 ELDPRIKEVIVPLPVYLVIVFGCFSLATIGYRVATFNDCEEAAASLKKEVEEARKDLTRKGFKFT 94
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9XPQ3_ANGAN) HSP 1 Score: 69.3 bits (168), Expect = 3.110e-11 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1
Query: 4 KRYQKLLGPILLGLCAWGVVLGYCAKQGECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
K + LLG ++G+ WG+ L + + Q +VV +P+Y L+VFGCY+LA +G + F DC E A L I AR+DL K+G KF
Sbjct: 3 KLLEWLLGSAMVGI-TWGL-LTFDVLDLQLPQAYREVVWPMPVYLLVVFGCYSLATVGYRVATFNDCEEAAKELQSQIIEAREDLEKKGLKF 92
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: dolichol-phosphate (mannosyltransferase subunit 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D7D31) HSP 1 Score: 68.9 bits (167), Expect = 4.390e-11 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 97 QPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
+ I DV+ P+Y +IVFGCY+L IG +I F DC + A L ++IQ ARKDL++RGFKF
Sbjct: 32 KEIKDVLLPFPLYMVIVFGCYSLVVIGYRVITFNDCEDAADSLRKEIQEARKDLSRRGFKF 92
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FMJ6_PARCT) HSP 1 Score: 68.2 bits (165), Expect = 8.280e-11 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 88 ECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
+ + + DVV P Y +IVFGCY+L IG ++ F DC + A L ++IQ ARKDL+K+GFKF
Sbjct: 29 KISKNVKDVVLPFPFYMVIVFGCYSLIVIGYRVLTFNDCEDAAESLRKEIQEARKDLSKKGFKF 92
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RBY9_STYPI) HSP 1 Score: 66.2 bits (160), Expect = 4.030e-10 Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 109 DVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKF 279
+V+ +P+Y LIVFGCY+LA IG + F DC E + L ++I AR+DL+KRGFKF
Sbjct: 36 EVIWPIPVYALIVFGCYSLATIGYRVATFNDCVEASESLKQEINDAREDLSKRGFKF 92
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: dolichol-phosphate (mannosyltransferase subunit 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8231) HSP 1 Score: 65.9 bits (159), Expect = 5.530e-10 Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 109 DVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFKFS 282
+V+ +P+Y +IVFGCY+L IG + F DC E + L ++++ ARKDLTK+GFKF+
Sbjct: 36 EVIWPMPVYAIIVFGCYSLIVIGYRVATFNDCVEASESLKKEVEEARKDLTKKGFKFN 93
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Match: Dolichol-phosphate (mannosyltransferase subunit 3 n=6 Tax=Otomorpha TaxID=186634 RepID=A0A3B4CMT0_PYGNA) HSP 1 Score: 65.5 bits (158), Expect = 7.390e-10 Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 4 KRYQKLLGPILLGLCAWGVVLGYCAKQGECGQPILDVVQVLPMYNLIVFGCYALAKIGLGLIAFKDCSEDAVLLDEDIQAARKDLTKRGFK 276
K + LLG L+G+ AWG+V + + +V +P+Y L+VFGCY+LA IG + F DC E A L IQ A+ DL K+G K
Sbjct: 3 KLLEWLLGVSLVGV-AWGLVT-FDLLDLQLPAAYKEVAWPMPVYLLVVFGCYSLATIGYRVATFNDCEEAAKELQAQIQEAKDDLKKKGLK 91 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9986.17968.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9986.17968.1 >prot_E_fasciculatus_S2_contig9986.17968.1 ID=prot_E_fasciculatus_S2_contig9986.17968.1|Name=mRNA_E_fasciculatus_S2_contig9986.17968.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=95bp MKRYQKLLGPILLGLCAWGVVLGYCAKQGECGQPILDVVQVLPMYNLIVFback to top mRNA from alignment at E_fasciculatus_S2_contig9986:1312..4207+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9986.17968.1 ID=mRNA_E_fasciculatus_S2_contig9986.17968.1|Name=mRNA_E_fasciculatus_S2_contig9986.17968.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2896bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9986:1312..4207+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9986:1312..4207+ >mRNA_E_fasciculatus_S2_contig9986.17968.1 ID=mRNA_E_fasciculatus_S2_contig9986.17968.1|Name=mRNA_E_fasciculatus_S2_contig9986.17968.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=285bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9986:1312..4207+ (Ectocarpus fasciculatus EfasUO2)back to top |