mRNA_E_fasciculatus_S2_contig9958.17942.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL23_9PHAE) HSP 1 Score: 862 bits (2227), Expect = 6.050e-309 Identity = 503/622 (80.87%), Postives = 523/622 (84.08%), Query Frame = 3
Query: 189 MNAGGTKL-SWGLPPLIAAW-YVLTGRESSKGGNHPAATSVLDRDRGGSSPSRSSSSGLPGEQQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQ---SDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVKAPPGGAGLPPEAL----------SSPPQAKALQSPQSLSGYKQALVGGSAQEASTAYSRKGLNALRSSSGG---GSSVSGSVEGGRDSNDGGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDRGEPVEEEVPAGPERISEEPRGERKGVGGGGAKKEWVYISDEEVERGSEKR 2000
MNAGGT L +W L + +GRESSKGGN PAATSVLDRDRGGS P S GL GEQ LAV GIKNLGNTCFLNAVLQSLASFHVFREYLEDL+ Y R+RE Q +DK + GAE LS KPLES+VFTCELLQLMK+LEPQV KLR LLRDR+DTFG+EDQQDAQELFQMVMRLVGEEAALCLK RS +S +R APG+ ITGGFADL DTASK NLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNL+KILEDFTREQ+VEDVECPKCAMRSAMEA ET ESXXXXXXXXXXXXXXXX PQRVRADMRMLLATPPKTLCLHFPRRH+SPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQ KSMLANSL QLPQGHAVK PG AGLPPEAL SSPPQAKALQSPQ L GYKQALVGGSAQEAS AYSRK LN LRS SGG GSSVSGSVEGGRDSND GSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSD+G+PVEEEVPAGPE +SE PRGERK VGGG AKKEWVYISDEEVER SEKR
Sbjct: 1 MNAGGTSLRTWVLAAFCTSIPQPASGRESSKGGNQPAATSVLDRDRGGSPPP---SGGLSGEQ-LAVPGIKNLGNTCFLNAVLQSLASFHVFREYLEDLHTYMREREHQEHQADKFVFGAEPVLSTKPLESTVFTCELLQLMKNLEPQVPPASPVTPIIPTKLRTLLRDRIDTFGREDQQDAQELFQMVMRLVGEEAALCLKKRSTSSTSRTTAPGIRITGGFADLMDTASK------NLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNLEKILEDFTREQLVEDVECPKCAMRSAMEARETHDEESXXXXXXXXXXXXXXXXVP---PQRVRADMRMLLATPPKTLCLHFPRRHRSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQTKSMLANSLTQLPQGHAVKTTPGAAGLPPEALLPTPRPPPSASSPPQAKALQSPQPLPGYKQALVGGSAQEASIAYSRKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDKGKPVEEEVPAGPEPVSEAPRGERK-VGGGCAKKEWVYISDEEVERVSEKR 608
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R1_ECTSI) HSP 1 Score: 862 bits (2226), Expect = 7.140e-309 Identity = 517/621 (83.25%), Postives = 532/621 (85.67%), Query Frame = 3
Query: 189 MNAGGTKLSWGLPPLIAAWYVLTGRESSKGGNHPAATSVLDRDRGGSSPSRSSSSGLPGEQQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQ----SDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVKAPPGGAGLPPEAL----------SSPPQAKALQSPQSLSGYKQALVGGSAQEASTAYSRKGLNALRSSSGG---GSSVSGSVEGGRDSNDGGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDRGEPVEEEVPAGPERISEEPRGERKGVGGGGAKKEWVYISDEEVERGSEKR 2000
MN GGT W +++ G ES KGGN AATSVLDRD+GGS P SSGL GEQ LAVTGIKNLGNTCFLNAVLQSLASFHVFREYLE+LYN QRE SDKVLS KPLE++VFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALC+KNRS +S +R APG+ ITGGFADL DTASKE GVLKNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHV GPGVPSPPVNLDKILEDFTREQ+VEDVECPKCAMRSAMEAHET H+E XXXXXXXXXXXXXX QRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVK PG AGLPPEAL PQAKALQSPQSL GYKQALVGGSAQEASTAYSRK LN LRS SGG GSSVSGSVEGGRDSND GSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSD+GEPVEEEVPAG ER+SE PRGERKG GGGGA KEWVYISDEEVER SEKR
Sbjct: 1 MNTGGTASRW--TRVLSFLQHAIGPESIKGGNQAAATSVLDRDQGGSPPP---SSGLSGEQ-LAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEELYNC-NQREXXXXXXSDKVLS-------TKPLENTVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCIKNRSTSSTSRTSAPGIRITGGFADLMDTASKE-GVLKNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVAGPGVPSPPVNLDKILEDFTREQLVEDVECPKCAMRSAMEAHET-HDEXXXXXXXXXXXXXXXEEVVVPL-QRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVKTTPGSAGLPPEALLPTPXXXXXXXXXPQAKALQSPQSLPGYKQALVGGSAQEASTAYSRKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDKGEPVEEEVPAGSERVSEAPRGERKG-GGGGANKEWVYISDEEVERVSEKR 603
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: USP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R2_ECTSI) HSP 1 Score: 128 bits (322), Expect = 4.470e-31 Identity = 82/130 (63.08%), Postives = 88/130 (67.69%), Query Frame = 3
Query: 189 MNAGGTKLSWGLPPLIAAWYVLTGRESSKGGNHPAATSVLDRDRGGSSPSRSSSSGLPGEQQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQ----SDKVLSGAESALSLKPLES 566
MN GGT W +++ G ES KGGN AATSVLDRD+GGS P SSGL GEQ LAVTGIKNLGNTCFLNAVLQSLASFHVFREYLE+LYN QRE SDKV GAES K E+
Sbjct: 1 MNTGGTASRW--TRVLSFLQHAIGPESIKGGNQAAATSVLDRDQGGSPPP---SSGLSGEQ-LAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEELYNC-NQREXXXXXXSDKVCHGAESVSICKHTEA 123
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 7.330e-17 Identity = 110/354 (31.07%), Postives = 141/354 (39.83%), Query Frame = 3
Query: 381 VTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTS------NNRRF-----APGMGITGGFADLTDTASKEDGVLKNLPEN-----PLLGSLMYLRHCRGCQ-QKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVN-----LDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEM-KLKQRVIFPAHL 1373
V G+ NLGNTCFLN+VLQSLAS F YLE + R G + + F+ LLQ + L ++ + L + TF DQQDAQE F ++ LV EE + LKNR ++ + R F AP +GG L A+ LP + P+ G+L C C K + F+D+SL LPEA + G N L F +E+ VE VEC C R E P+ R+ LA P+ LCLHF RRH SPS M KL QRV FP L
Sbjct: 7 VVGLPNLGNTCFLNSVLQSLASLRHFVSYLEGM----RPTVGHASRAS----------------FSRTLLQCLSQLAGGAAAAPSSTYPIAREVYEGLLRKAPTFQGRDQQDAQEAFHALVDLVDEER-IQLKNRLGSAYVVPLRSRRDFLRIHPAPPF-ASGGLEALLRPAAAV------LPASFFGALPMQGTLCSSLRCVVCNTSKPLTVAPFIDISLPLPEAYQLYGGGASAHHASSNGFANGNGACLRAFMQEEEVEGVECDACTHRRRRERR----------------IQERLRRGDGEGPELRTFVKRLSLARLPRVLCLHFCRRHYSPSRERMVKLSQRVRFPLEL 316
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Cysteine (proteinase n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9M0I7_9FUNG) HSP 1 Score: 86.7 bits (213), Expect = 5.270e-14 Identity = 118/369 (31.98%), Postives = 163/369 (44.17%), Query Frame = 3
Query: 381 VTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKD--LEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDT-ASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRA--------------------DMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTD 1415
V G+ N+GNTCFLN+VLQSL+S + YL GQ LS A SA L +S + T LL + +P K R LL +QQDAQE++Q+++ + E K + GG DL ASK+ +KN PL G + R C C RLE F D+ L LP S LD+ L T+ ++EDV+C KC++ + + T XXXXXXXXXXXXXXXXXXXXX R+ + + + PPK LCLHF R + +G +K + +V++P L++ +C G T+
Sbjct: 118 VAGLINIGNTCFLNSVLQSLSSLPKLQHYL-----------GQ----LSTAHSASRLPVTQSLLKTLRLLSQPSNNAFKPT------DIVNVLGKYRNLLN--------REQQDAQEIYQLLVNELDSETDQLEKKQ----------------GGLRDLLSFGASKKTTKIKN----PLKGRMADKRSCTVCGYSGALRLEDFSDIQLALP-----------TDSASTTLDECLTQLTKVDVMEDVDCMKCSLVNRAQELATKXXXXXXXXXXXXXXXXXXXXXXXXXXHRLNTGDIEREGGDPSIGTMIKRAKSKQSMFSKPPKVLCLHFVRSVYTDAGETLKNECQVVYPEMLDLTPYCTNGRLQTE 426
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: USP (domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168NYX9_MUCCL) HSP 1 Score: 84.3 bits (207), Expect = 2.820e-13 Identity = 95/381 (24.93%), Postives = 147/381 (38.58%), Query Frame = 3
Query: 357 LPGEQQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGK------EDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDT-ASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETT--------HNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRM------------LLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTD 1415
L L V G+ N+GNTCFLN+VLQSL+S + YL+ + S SA L +S + T LL +P D V+ GK ++QQDAQE++Q+++ + E K + GG DL ASK+ +K+ PL GS+ R C C RLE F D+ L LP + LD+ L T+ + +E V+C KC++ + +E T +S +R D + +++ PPK LC HF R + +G +K + +V++P L++ +C G T+
Sbjct: 109 LQESSSLMVAGLINIGNTCFLNSVLQSLSSLPKLQHYLDQV---------------SSKHSASRLPVTQSLLKTLRLLS-----QPSNNAFKPT-------------DIVNVLGKHRNILNKEQQDAQEIYQLLVNELEAETDQLAKKQ----------------GGLKDLLSFGASKKTDEIKS----PLRGSITDRRSCTACGYTGPLRLENFTDIHLALP-----------TDAASTTLDECLAQLTKVEEMEGVDCAKCSLVNRVEELATEIKVLKQKGQRKSKEVQRKQSLKAEIERRLNIGDIEREGGDTAIKTMVRRSKSKQAMISKPPKVLCFHFVRSVYTNAGEAIKNECQVVYPELLDLTPYCTNGSLKTE 425
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556V0S1_BAGYA) HSP 1 Score: 84.3 bits (207), Expect = 3.020e-13 Identity = 96/375 (25.60%), Postives = 155/375 (41.33%), Query Frame = 3
Query: 348 SSGLPGEQQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQ------QDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASKED--------GVLKNLPE-----NPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHT 1412
S+G ++ V G+ NLGNTCFLNA+LQ LA+ +L++ + R SD SG +SA SL+ S ELL + L+P + + +L R + +F ++ QDA ELF ++ + EE R P + L +A K + G L +P+ +P G L C+ C+ +S R + F LSL++P + P+ LD+ L+ F + +++V C C + A A ++ ES QR ++ L P+ LC+H R SP G+ +K + V F +LN+ R+ ++ HT
Sbjct: 52 SAGRKKRRRGMVPGLLNLGNTCFLNALLQGLAACPSLVSWLQEFTTHSRSSCLPSD-AQSGMQSA-SLQDTRVSKTLLELLTALSSLDPGLDDVLDAGSLL--EALRLYRWHISSFEEQSAKLSLRLQDAHELFHVLTSSLEEE--------------REQQPRVPHLFDMETLEKSAEKSEISVSCWSRGPLHPIPDLWRTQHPFHGRLTSYMACKRCEHQSPVRYDSFDSLSLSIPAVQWGR---------PITLDQCLQHFISSETIKEVVCENCTKKQAGSA-DSRAIES----------------------QRTTFIKQLKLGKLPRCLCIHLQRLTWSPEGAPIKRHEHVKFSEYLNMDRYKHSSVTHT 376
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8FQT4_CLUHA) HSP 1 Score: 82.0 bits (201), Expect = 9.380e-13 Identity = 98/375 (26.13%), Postives = 148/375 (39.47%), Query Frame = 3
Query: 381 VTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEA-----------ALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSAMEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSL 1469
V G+ NLGNTCFLN++LQ LAS F +L++ SGA K E S +LL+ + P V LR L R ++ F ++QDA ELF ++ + EE L++ S + N G G L ++P G LM C+ C+Q+S R + F LSLT+P A+ PV LD+ L+ F + + +VEC C A E+ E+ QR ++ L P+ LC+H R S G+ +K ++ V F +L++ R+ HT S P++ Q + A S+
Sbjct: 37 VPGLLNLGNTCFLNSLLQGLASCPSFIRWLQEF---------------SGAGQGRLEKANELSTTLVQLLKALSSHNP-VEDDVLDAGCLLDVLR-LHRWQISLF---EEQDAHELFHVLTSSLEEERDHHTAVIHLFDMQSLESSSESRENSLSCRGRGPLHSMPSLWRN------------QHPFHGRLMSYMACKHCKQQSPVRFDSFDSLSLTIPSAQLGR---------PVTLDQCLQHFISSETIREVECVHCTKMQAAESLNGHVGEN----------------------QRTTFIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYK-----HTAS---PSSLQQTNSTAQSV 340
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: USP (domain-containing protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) TaxID=1220926 RepID=S2JJ66_MUCC1) HSP 1 Score: 80.1 bits (196), Expect = 6.090e-12 Identity = 94/369 (25.47%), Postives = 137/369 (37.13%), Query Frame = 3
Query: 381 VTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKD--LEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASKEDGVLKNLPENPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSA---------------------MEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTD 1415
V G+ N+GNTCFLN+VLQSL+S F+ YL+ L S S + +S + T LL EP + K+L KE QQDAQE++Q+++ + E K + G DL S N ENPL G L C C SG +L+ F ++ L LP N V LD+ L+ T + + DV+C KC++ + M+ E N+ + ++ M A PPK LCLHF R + G K +V++P L++ +C G T+
Sbjct: 117 VAGLINIGNTCFLNSVLQSLSSLPKFQTYLDQL---------------SSTHSTSKIPVTQSLLKTLRLLSQPSSNAFEPT-------------DIVKVLEKNHGLLNKE-QQDAQEIYQVLVSELESETTQLSKKQ-----------------GLKDLLSLGSSRKA---NKIENPLTGLLADRTACMDCGYSSGLQLQPFNNIQLALPT--NADVT---------TLDECLKQLTSMEYLNDVDCMKCSLLNQVKELATEIEFLKQQEPKRSREMQRKEDLKNKIEHRLNTGNIERNGGNSSTGMIVKSTKSKQGMF-AKPPKVLCLHFVRSMYTALGEVHKNDCQVVYPEILDLTPYCTNGRLETE 424
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=3 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0PLF5_ICTPU) HSP 1 Score: 78.2 bits (191), Expect = 1.810e-11 Identity = 88/345 (25.51%), Postives = 138/345 (40.00%), Query Frame = 3
Query: 381 VTGIKNLGNTCFLNAVLQSLASFHVFREYLEDLYNYERQREGQSDKVLSGAESALSLKPLESSVFTCELLQLMKDLEPQ-VXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCLKNRSRTSNNRRFAPGMGITGGFADLTDTASK-EDGVLKNLP-----ENPLLGSLMYLRHCRGCQQKSG-RLERFVDLSLTLPEARNPHVVGPGVPSPPVNLDKILEDFTREQMVEDVECPKCAMRSA-MEAHETTHNESXXXXXXXXXXXXXXXXXXXXXPQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARF 1388
V G+ NLGNTCFLNA+LQ LA+ F +L+D ++ R SD V + LLQL+ L + +L R + +F ++QDA ELF ++ + EE R R + D S G L +P ++P G L C+ C+++S R + F LSL++P + PV LD+ L+ F +M+++VEC C + A EA + + QR ++ L P+ LC+H R SP G+ +K + V F +L++ R+
Sbjct: 63 VPGLLNLGNTCFLNALLQGLATCPPFISWLQDFTSHSNSRLSSSDTQXXXXXXXXXXXXXXXXV-SKTLLQLLTALSSSDPGEDDVLDAGCLLEALRLYRWHISSF---EEQDAHELFHVLTSSLEEE-------RERQPRVPHLFDMETLEKKAETSPDPVSCWSRGPLHPVPNLWRGQHPFHGRLTSYMACKRCERQSPVRYDSFDSLSLSIPAVQWGR---------PVTLDQCLQHFISSEMIQEVECENCTKKQAETEARQVLES------------------------QRTTFVKQLKLGKLPRCLCIHLQRLTWSPEGAPIKRHEHVQFSEYLSMDRY 363 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9958.17942.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9958.17942.1 >prot_E_fasciculatus_S2_contig9958.17942.1 ID=prot_E_fasciculatus_S2_contig9958.17942.1|Name=mRNA_E_fasciculatus_S2_contig9958.17942.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=604bp MNAGGTKLSWGLPPLIAAWYVLTGRESSKGGNHPAATSVLDRDRGGSSPSback to top mRNA from alignment at E_fasciculatus_S2_contig9958:2..4624- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9958.17942.1 ID=mRNA_E_fasciculatus_S2_contig9958.17942.1|Name=mRNA_E_fasciculatus_S2_contig9958.17942.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4623bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9958:2..4624- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9958:2..4624- >mRNA_E_fasciculatus_S2_contig9958.17942.1 ID=mRNA_E_fasciculatus_S2_contig9958.17942.1|Name=mRNA_E_fasciculatus_S2_contig9958.17942.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1812bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9958:2..4624- (Ectocarpus fasciculatus EfasUO2)back to top |