mRNA_E_fasciculatus_S2_contig9932.17927.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 1.040e-123 Identity = 217/246 (88.21%), Postives = 223/246 (90.65%), Query Frame = 1
Query: 733 RKRTRSCSRERGGSRCDSRGRSSRKM-TAVDSRSGVECARCLEWCRSSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGSIAVAAXXXXXXXXXXXXXXXXXXXXDGDGTDGHDGSCAAVVTDCE 1467
RKR RSCSRERG SR DSRGRSSRK T +SR GVECARCLEWCR SR+PKTPI RTLQMDYWVRT NCKAAK++HIDFIDDVAYSREQFIEETVFTCPFTGARR IVLERNMFPYDVPTDVEHWTLWSR+DLPNDEMEAFVQGWAA+NHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS AVA XXXXXXXXXXXXXXXXXXX G TD DGS A VTDCE
Sbjct: 256 RKRNRSCSRERG-SRGDSRGRSSRKTPTTAESRCGVECARCLEWCRPSRSPKTPIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS-AVAGXXXXXXXXXXXXXXXXXXX--GTSTDRDDGSRAVGVTDCE 497
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE) HSP 1 Score: 388 bits (996), Expect = 2.030e-121 Identity = 211/245 (86.12%), Postives = 217/245 (88.57%), Query Frame = 1
Query: 733 RKRTRSCSRERGGSRCDSRGRSSRKM-TAVDSRSGVECARCLEWCRSSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGSIAVAAXXXXXXXXXXXXXXXXXXXXDGDGTDGHDGSCAAVVTDC 1464
RKR RSCSRER SR DS GRSS+K T +SRSGVECARCLEWCRSSRTPKTPI RTL M+YWVRT NCKAAK++HIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLP DEMEAFVQGWAA+NHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS A XXXXXXXXXXXXXXXXXXX D D SCA V TDC
Sbjct: 251 RKRNRSCSRERS-SRGDSXGRSSKKAATTAESRSGVECARCLEWCRSSRTPKTPIPRTLPMEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPCGS--AVAGXXXXXXXXXXXXXXXXXXXXXTSNDRDDRSCALVATDC 492
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.060e-40 Identity = 70/120 (58.33%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 904 LQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFR 1263
+ M++WVR CK KTEH+DFID SREQFIE+TVFT P TG RD VLE NMFPY P DVEHWTLWSR D+ ++E++A+V W N PH W D+N G+RSI WFHVHV+ +
Sbjct: 131 MPMEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQ 250
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.030e-31 Identity = 65/139 (46.76%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 850 CLEWCRSSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRL 1266
C + RSS +P RTL ++YW RT +C K +H+DFID SRE FI ET RD +LE NMFPYD P D+ HWT+W R ++ +E+ +V+ W K +P+ VEW D+N GERSID +HVHV+FR+
Sbjct: 50 CKKRSRSSCNSNSP-PRTLTIEYWDRTDDCINKKWDHMDFIDANFDSRENFILETALL------NRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWM-KKYPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P6_GLOUD) HSP 1 Score: 125 bits (314), Expect = 6.380e-30 Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 892 IARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDR 1281
+ RTL +DYW R+ C K +H+D ID+V+ SRE+ I T T I+LE NMFPY P +EHWTLWSR ++ + E+EA+V W +N PH W D N RSID FHVHV+F++ R
Sbjct: 2 MQRTLIIDYWDRSEECLERKWDHMDMIDEVSPSREEHILST------TLRDEHIILEPNMFPYTTPDGIEHWTLWSRNEMGDQEVEAYVSSWITENAPHVKSWNFDENSS-RSIDLFHVHVYFQVEAGQR 124
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM77_PHYRM) HSP 1 Score: 123 bits (308), Expect = 7.260e-28 Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 814 AVDSRSGVECARCLEWCRSSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRL 1266
A+D+ + VEC SS +P+ RTL ++YW RT CK K +H+D I + S E E +F G R LE NMFPYD P +EHWTLW +DL +++++ +V+ W N PH W D+N ERSID FHVHV+F++
Sbjct: 79 AMDATADVEC--------SSESPRRRSLRTLYVEYWSRTDECKERKWDHLDEIAENYGSAE----EHIFATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVQRWNYDDNP-ERSIDIFHVHVYFQV 214
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDG9_9STRA) HSP 1 Score: 119 bits (299), Expect = 8.270e-28 Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 868 SSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDR 1281
S T RTL ++YW R+ C K +H+D IDD SRE+ I T G+R +LE NMFPY P +EHWTLWSR +L ++E+E V W A+ PH + W D+N RSID FHVHV+FR+ R
Sbjct: 3 SDAPSSTKGRRTLVIEYWSRSDECLERKWDHLDKIDDSGLSREEHILATTLK----GSRT--LLEPNMFPYSTPAGIEHWTLWSRDELSDEEVERCVGIWIAEKAPHVLSWNFDDNPA-RSIDLFHVHVYFRVAVGQR 133
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YQY0_PHYSP) HSP 1 Score: 124 bits (312), Expect = 1.580e-27 Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 814 AVDSRSGVECARCLEWCRSSRTPKTPIARTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRL 1266
A+DS + VEC SS +P+ RTL ++YW RT CK K +H+D I + + EE +F G R LE NMFPYD P +EHWTLW +DL +++++ +V+ W N PH W D+N ERSID FHVHV+F++
Sbjct: 163 AMDSAADVEC--------SSESPRRRSRRTLYIEYWSRTDECKERKWDHLDEITE----KYGTAEEHIFATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVERWNYDDNP-ERSIDIFHVHVYFQV 298
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA) HSP 1 Score: 118 bits (296), Expect = 7.330e-27 Identity = 59/139 (42.45%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 898 RTLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVY 1314
RTL + YW RT C K H+D +DD+ SRE+ I T T + + LE NMFPYD P +EHWTLWSR ++ N E+E +V W +N PH W D N RSID FHVHV+ + P P+ +Y
Sbjct: 59 RTLALQYWDRTDECLERKWAHMDMVDDLFESREELILAT------TLSHTETALEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQA--------PAQPSFLY 182
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q1_PYTIN) HSP 1 Score: 116 bits (290), Expect = 2.650e-26 Identity = 58/140 (41.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 859 WCRSSRTPKTPIAR----TLQMDYWVRTSNCKAAKTEHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPNDEMEAFVQGWAAKNHPHAVEWECDNNEGERSIDWFHVHVFFRL 1266
W S++ P R TL ++YW RT CK K +H+D I D S E E +F G R LE NMFPYD P +EHWTLW +L +++++ +V+ W N PH + W D+N ERSID FHVHV+F++
Sbjct: 11 WVMLSKSNLAPYKRHSRRTLYIEYWSRTDECKERKWDHLDDIADKYGSAE----EHIFATTLNG--RTAFLEPNMFPYDTPAGIEHWTLWHVNELNHEQIKQYVENWIDANAPHVLRWNYDDNP-ERSIDIFHVHVYFQV 143 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9932.17927.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9932.17927.1 >prot_E_fasciculatus_S2_contig9932.17927.1 ID=prot_E_fasciculatus_S2_contig9932.17927.1|Name=mRNA_E_fasciculatus_S2_contig9932.17927.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=483bp MTSFSTRSFSGMTNRALPSATSERGYPPRRSAAALAACGSGVTMAVPRLPback to top mRNA from alignment at E_fasciculatus_S2_contig9932:235..4241+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9932.17927.1 ID=mRNA_E_fasciculatus_S2_contig9932.17927.1|Name=mRNA_E_fasciculatus_S2_contig9932.17927.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4007bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9932:235..4241+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9932:235..4241+ >mRNA_E_fasciculatus_S2_contig9932.17927.1 ID=mRNA_E_fasciculatus_S2_contig9932.17927.1|Name=mRNA_E_fasciculatus_S2_contig9932.17927.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1449bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9932:235..4241+ (Ectocarpus fasciculatus EfasUO2)back to top |