mRNA_E_fasciculatus_S2_contig9924.17918.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU9_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 6.340e-138 Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 1
Query: 1 ADLEHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
ADLEHTMTRDEVFRRL+ILAVGLNVTFVLWGVLQERILKGEYGD GEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILG+KEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR
Sbjct: 165 ADLEHTMTRDEVFRRLIILAVGLNVTFVLWGVLQERILKGEYGD-GEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 368
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: UAA (transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU6_9STRA) HSP 1 Score: 285 bits (730), Expect = 2.510e-91 Identity = 147/210 (70.00%), Postives = 166/210 (79.05%), Query Frame = 1
Query: 1 ADLEHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYS-----YGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
AD E R EV ++L L +GLNVTFVLWGVLQERILK EYG G+ FTY YGLVF NR LG LFS GM++YTRP WSKALAYEYS P+V+NMLSSWCQYEALK+VTFPTQVLSK+FKI PIM+MG++LG+K YP YDY VAG I LG+ LF+ SSEG+ G D FGQQ +V CG+MLL LYLVFDSFTSQWQSRMFTKHR
Sbjct: 158 ADDEVLPPRSEVIKKLAGLGLGLNVTFVLWGVLQERILKMEYGQ-GDFFTYRQAARFYGLVFTNRALGLLFSGGMLYYTRPTWSKALAYEYSLPSVTNMLSSWCQYEALKFVTFPTQVLSKAFKIAPIMLMGRMLGNKSYPLYDYCVAGTIGLGVALFVTSSEGLRLGADSFGQQ---GAVGCGIMLLGLYLVFDSFTSQWQSRMFTKHR 363
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y164_HETAK) HSP 1 Score: 246 bits (629), Expect = 1.710e-76 Identity = 122/201 (60.70%), Postives = 158/201 (78.61%), Query Frame = 1
Query: 16 TMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKW-SKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
T +R EV +RL++ +GLN++F+ WGVLQER+L Y GE FTYSY LVF NR G + SAG++++ +P ++A+ YEYSFP+VSNMLSSWCQYEALKYVTFPTQ+LSK FK+VPIMVMGK++G+K YP YDYVVA VI LGI++FL S+EG+D G D G+ E S G++LL L+LVFDSFTSQWQ+RMF +++
Sbjct: 178 TSSRGEVLQRLLVSVLGLNLSFLAWGVLQERMLTQTY--QGEFFTYSYMLVFTNRLGGLVLSAGLLYFFKPPIETRAMIYEYSFPSVSNMLSSWCQYEALKYVTFPTQMLSKCFKLVPIMVMGKVMGNKSYPMYDYVVAAVIGLGISVFLMSTEGLDLGRDATGEAESASGTYTGVLLLGLFLVFDSFTSQWQTRMFDRNK 376
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZ86_9STRA) HSP 1 Score: 233 bits (594), Expect = 6.330e-73 Identity = 115/196 (58.67%), Postives = 148/196 (75.51%), Query Frame = 1
Query: 25 RDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKH 612
+ +V RL AVGLNV+F++WG+LQER+L Y +GE+F+ SYGLVF+NR GF+ S M++ +P + A+ YE+SFP+VSNMLSSW QYEALKYV+FPTQ+L K FK+VPIM+MGK LG+K YP YDYVV +I GI +F+ S+E ++FGTD G E S CGMMLL +LVFDSFT QWQSRMF++H
Sbjct: 1 KKQVLGRLFNCAVGLNVSFLVWGILQERMLTRPY--NGEYFSSSYGLVFLNRLGGFIISGIMLYAFKPPHTSAVVYEFSFPSVSNMLSSWTQYEALKYVSFPTQMLFKCFKLVPIMLMGKFLGNKSYPAYDYVVCFMIGFGIAIFMVSTEDMEFGTDSIGTPETWSGTICGMMLLCFFLVFDSFTGQWQSRMFSRH 194
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CE74_9STRA) HSP 1 Score: 233 bits (594), Expect = 2.660e-71 Identity = 114/196 (58.16%), Postives = 148/196 (75.51%), Query Frame = 1
Query: 16 TMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMF 603
TMT+ V RL +GLNV+F++WGVLQER+L Y +DGE+F+ SYGLVF+NR GF+ S M++ +P ++A+ YE+SFP+VSNMLSSWCQYEALKY++FPT +L K FK+VPIM+MGK LG+K YP YDYVV+ +I GI LF+ S+E ++FG D G E S CG+MLL +L+FDSFT QWQSRMF
Sbjct: 134 TMTKKGVLNRLAFCVMGLNVSFLIWGVLQERMLTQPY-NDGEYFSSSYGLVFLNRLGGFIISGLMLYAFKPPHTEAIIYEFSFPSVSNMLSSWCQYEALKYISFPTAMLFKCFKLVPIMLMGKYLGNKTYPAYDYVVSLLIGFGIALFMISTEDMEFGMDSIGTPETWSGTMCGLMLLGFFLLFDSFTGQWQSRMF 328
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VXV3_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.850e-68 Identity = 111/204 (54.41%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
+ TM++ EV RRL + LN+TFV WGVLQER+L Y GE FTYSY LVF NRF + S M+ Y +P+ S++ + YEYSFP++SNM+SSWCQYEAL+YV+FP L KSFK+ P+M+MGKILG+K YP YDY+VA +I +GIT+F++ ++ + FG D++G + G+ G+MLL +L+FD+FTSQWQSRMF +HR
Sbjct: 198 QETMSKTEVLRRLAFCTLMLNITFVTWGVLQERMLTRRYPRWTGEFFTYSYALVFTNRFWTLIMSGLMLLYFKPRRSRSTVIYEYSFPSISNMMSSWCQYEALRYVSFPATTLFKSFKLGPVMIMGKILGNKSYPQYDYIVAVMIGVGITMFMSETDNLSFGHDIYGAEASGTWT--GVMLLFFFLLFDAFTSQWQSRMFQRHR 399
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIR8_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.130e-68 Identity = 116/204 (56.86%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
+ T +R V +RL + LNVTFV WGVLQER+L Y GE+FTYSY LVF NRF L S ++ Y +P+ S+ + YEYSFP+++NMLSSWCQYEAL+YV+FP L KSFK+ P+M MGKILG+K YP YDY VA VIA+GIT+F++SS+ ++FG D+ G ++ S V G+ML++L+L FDSFTSQWQSRMF +HR
Sbjct: 211 QETASRQSVLKRLSFCVLMLNVTFVTWGVLQERMLTRRYPRFTGEYFTYSYALVFTNRFWTLLMSGALLLYLKPRTSRTTVLYEYSFPSITNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKILGNKSYPQYDYFVALVIAVGITMFMSSSDDLEFGYDVHG--DRASEVWTGIMLMSLFLFFDSFTSQWQSRMFQRHR 412
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRX1_9STRA) HSP 1 Score: 225 bits (573), Expect = 4.420e-68 Identity = 116/203 (57.14%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 22 TRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVFMNRFLGFLFSA---GMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRVS 621
T+ EV R L+ GL +F++WG+LQER+L Y + GE+FTYSYGLVF NR + S+ M + S A YEYSFP+VSNMLSSWCQYEAL YVTFPTQ LSKSFK+VPIM+MG++L +K YP Y+Y A I LG TLF+ ++E ++ G D FGQ E S CG+MLL L+L FDSFTSQWQSRMF+KH +S
Sbjct: 162 TKGEVLRTLLFCTAGLICSFLVWGILQERMLTMPYRN-GEYFTYSYGLVFTNRLFSLILSSILVWMYEWESLTLSSAPLYEYSFPSVSNMLSSWCQYEALAYVTFPTQTLSKSFKLVPIMLMGRMLTNKRYPLYEYATAISIGLGNTLFMMATENLELGVDSFGQVEDKSGTWCGVMLLLLFLFFDSFTSQWQSRMFSKHEIS 363
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJK7_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.620e-67 Identity = 113/204 (55.39%), Postives = 152/204 (74.51%), Query Frame = 1
Query: 10 EHTMTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
+ T +R V + L ++ LN+TFV WG+LQER+L Y GE+FTYSY LVF NRF + S + Y +P+WS++ + YEYSFP++SNMLSSWCQYEAL+YV+FP L KSFK+ P+M MGK+LG+KEYP YDY VA VI +G+ +F++S+EGV+FG D++G E+ S+ G+ML+ L+L FDSFTSQWQSRMF +HR
Sbjct: 210 QSTTSRATVLKTLTGCSLMLNLTFVTWGLLQERMLTRRYPRITGEYFTYSYALVFTNRFWTLIMSGLLFFYFKPRWSRSTVIYEYSFPSISNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKLLGNKEYPQYDYFVALVIGIGLAMFMSSTEGVNFGYDVYG--EEVSATWTGIMLMFLFLFFDSFTSQWQSRMFQRHR 411
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEH4_9STRA) HSP 1 Score: 225 bits (574), Expect = 4.980e-67 Identity = 114/207 (55.07%), Postives = 153/207 (73.91%), Query Frame = 1
Query: 4 DLEHTMT-RDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGD-DGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKA-LAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGSKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHR 615
+ E +T + V +RL + LN+TFV WGVLQER+L +Y GE+FTYSY LVF NR + S G++ Y +P+WS++ + YEYSFP++SNMLSSWCQYEAL+YV+FP L K+FK+ P+M MGKILG+KEYP YDYVVA VI +G+T+F++S++ + FG D++G E+ S+ G+MLL +L FDSFTSQWQSRMF HR
Sbjct: 262 EFEQRLTSKTSVLQRLAFCVIMLNLTFVAWGVLQERMLTRKYPRLTGEYFTYSYALVFTNRCWTVIMSGGLLMYLKPRWSQSTVIYEYSFPSISNMLSSWCQYEALQYVSFPAVTLFKAFKLAPVMAMGKILGNKEYPQYDYVVALVIGVGLTMFMSSTDDLHFGYDIYG--EEASATWTGVMLLFFFLFFDSFTSQWQSRMFQHHR 466 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9924.17918.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9924.17918.1 >prot_E_fasciculatus_S2_contig9924.17918.1 ID=prot_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=203bp MTRDEVFRRLVILAVGLNVTFVLWGVLQERILKGEYGDDGEHFTYSYGLVback to top mRNA from alignment at E_fasciculatus_S2_contig9924:822..5439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9924.17918.1 ID=mRNA_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4618bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9924:822..5439- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9924:822..5439- >mRNA_E_fasciculatus_S2_contig9924.17918.1 ID=mRNA_E_fasciculatus_S2_contig9924.17918.1|Name=mRNA_E_fasciculatus_S2_contig9924.17918.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=609bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9924:822..5439- (Ectocarpus fasciculatus EfasUO2)back to top |