mRNA_E_fasciculatus_S2_contig99.17895.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP2_9PHAE)

HSP 1 Score: 997 bits (2578), Expect = 0.000e+0
Identity = 684/904 (75.66%), Postives = 711/904 (78.65%), Query Frame = 1

Query:    1 MTRGRGVLVAAAFATTATWPSSTPGRSTNSAWGFRAAAPRSANCLAVNKRSDSCRSRLCGSWSAADAAASTRQQSRGSAYTAQCLHANAAFKESSVYPSLDARRGRGGVASFFASRWCSSSXXXXXSRPRLLPLPSRATGGDXXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFIGVDEEGEDGGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDNGFDNEIAXXXXXXXRGRRPAPGRGFQPRSGGVGATGGMGRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQEPTERRTAEQERRQEFAGGAMDFEPVGSKKAKALSEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXTYFGXXXXXXAEDTGRNSRGSGGRADVVDDGSLDLDAILGDGYDYDGXXXXXXXXXXXXXXXGTADDWRDXXXXXXXXXXXXXXXEGARQMDRMGIYDREEDFVDAFPRGRGXXXXXXXREMDRGMGGPRGQSRRPRRKKKPGITPAEQYERQVFGDLGGEDGRSAGNRRPLWDEENEEDGGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDDEYDDDGNIDGRGRATRRRSGTNNLYDDYTSYGYGEDGDARGGGKTGYDVQDQRDERGFDFDDRFEGGEGNXXXXXXXXXGWDEDRGPSRRKFDVGSFLRSGPLNIMQPGAGMEQKAAQFERRYPGRTGSSYDDADDNAASAGSPGGRNNGDDSFGRRGRTRLEEDYDYDDGVRGRRRGRGGDRGGSSPGYLDEDEYDY 2712
            MTRGRGVL+AAA ATTATWPSSTPGRST+SAWGF AAAPRSANCL  NK + S                                                                         SR RLL LPSRATGG XXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFIGVDEE         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXX       GRGFQP SGGVG TG M RERR S ADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAK KSASMRRPLEDDQ+  E   AEQE RQEFAG A +FEPVGSKKAKAL+EDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXX YFG      AED GR SRGS  R  VVDDGSLDLDAILGDGYDY+GXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXEGA QM R G+ DREEDFV    RGR        REMD G+GGPRGQSRRPRRKKK  I+PAE+YERQ+FG+LGGEDG+ AGNRRPLWDE +EEDGGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDD+YDDDGNIDGR RA RRRSGTNNLYDDYTSYGYG+D D  GGG++GYDV+ QRDERGFD+DDR +GGEGN         GWDED  PSRRKFDVG+FLRSG  NIMQPGAGME+KAAQFERRYPGRTGS YDD DDNAASAGSPGGRN G DSFGRRGR R E DYDYDD VRGRRRGRGGDRGGSSPGY+DE++YDY
Sbjct:    1 MTRGRGVLLAAAVATTATWPSSTPGRSTSSAWGFLAAAPRSANCLDANKSTSS-----------------------------------------------------------------------TSSRARLLLLPSRATGGXXXXXXXXXXGLDAESVARAREAAKKDDYDWFMEFIGVDEE--------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGFQPLSGGVGTTGEMRRERRPSPADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKAKSASMRRPLEDDQQSME---AEQEIRQEFAGRAAEFEPVGSKKAKALTEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXXYFGGGATTAAEDVGRTSRGSSDRGGVVDDGSLDLDAILGDGYDYNGXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXEGAPQMGRRGMDDREEDFV---LRGRDEGRGRGRREMDGGVGGPRGQSRRPRRKKK-NISPAERYERQIFGELGGEDGKGAGNRRPLWDENDEEDGGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDDDYDDDGNIDGRNRAARRRSGTNNLYDDYTSYGYGQDEDVLGGGRSGYDVEGQRDERGFDYDDRLKGGEGNRRQRQRRQRGWDEDTEPSRRKFDVGTFLRSGAQNIMQPGAGMEEKAAQFERRYPGRTGSYYDDGDDNAASAGSPGGRNTGHDSFGRRGRARREGDYDYDDDVRGRRRGRGGDRGGSSPGYVDEEDYDY 816

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BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C6_ECTSI)

HSP 1 Score: 658 bits (1698), Expect = 5.510e-220
Identity = 401/493 (81.34%), Postives = 424/493 (86.00%), Query Frame = 1

Query:  832 MGRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQEPTERRTAEQERRQEFAGGAMDFEPVGSKKAKALSEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPPXXXXXXXXXXXXXXXXXTYFGXXXXXXAEDTGRNSRGSGGRADVVDDGSLDLDAILGDGYDYDGXXXXXXXXXXXXXXXGTADDWRDXXXXXXXXXXXXXXXEGARQMDRMGIYDREEDFVDAFPRGRGXXXXXXXREMDRGMGGPRGQSRRPRRKKKPGITPAEQYERQVFGDLGGEDGRSAGNRRPLWDEENEEDGGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDDEYDDDGNIDGRGRATRRRSGTNNLYDDYTSYGYGEDGDARGGGKTGYDVQDQRDERGFDFDDRF 2310
            M RERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQ+  E   AEQE  QEFAG A++FEPVGSKKAKAL EDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMP XXXXXXXXXXXXXXXXX    XXXXXXAED  R SRGSG R  VVDDGSLDLDAILGDGYDY+G         XXXXXX        XXXXXXXXXXXXXXXE A  + R G+YDREED    FPRGR        REMD G+GGPRGQS+RPRRK++  I+PAE+YERQ+FG+LGGEDG+ AGNRR LWDE++EED GKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDD+YDDDGN DGR R  RRRSGTNNLYDDYTSYGYG+D D RG G++GYDVQ QRDERGFD+DDR+
Sbjct:    1 MRRERRTSSADTAYDYDLDEEYDQEPGRGGWDYDPGLSAGIGARRRDVQVDKVRAKTKSASMRRPLEDDQQSME---AEQE--QEFAGRAVEFEPVGSKKAKALIEDLGYTEAEVACIDPDMADLAIERAIRRPASGMPRDWVAVGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDVVRTSRGSGDRGGVVDDGSLDLDAILGDGYDYNGVGGRRRKGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-APHLGRGGMYDREEDL---FPRGRDEGRGRGRREMDGGVGGPRGQSKRPRRKERTEISPAERYERQIFGELGGEDGKGAGNRRALWDEDDEEDEGKLWTGVGPDGPWPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGETLEEAGVFDAAFTDDDDYDDDGNTDGRSRTARRRSGTNNLYDDYTSYGYGQDADVRGAGRSGYDVQGQRDERGFDYDDRY 484

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BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.830e-15
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = -2

Query: 4117 QVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENEDVPKKRSRSR 4272
            +VEVVEVKSKGDTISKEQKAWLAELEDIGVPA+V+RV+AENE VPKKRSRSR
Sbjct:  954 EVEVVEVKSKGDTISKEQKAWLAELEDIGVPAMVSRVVAENEAVPKKRSRSR 1005

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BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Match: VRR-NUC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC9_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.670e-14
Identity = 45/52 (86.54%), Postives = 50/52 (96.15%), Query Frame = -2

Query: 4117 QVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENEDVPKKRSRSR 4272
            +VEVVEVKSKGDTI KEQKAWLAELEDIGVPA+V+RV+AENE VPKKRSRS+
Sbjct:  738 EVEVVEVKSKGDTIRKEQKAWLAELEDIGVPAMVSRVVAENEAVPKKRSRSQ 789

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BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJX8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.080e-6
Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 1

Query: 1873 GKLWTGVGPDGP-WPTMEEFTKLLREETEVRLSLVGPWAAEVVALENRFRLQAYEKWLEVLDKGIGE--TLEEAGV 2091
            GK    + P+G  WP +  F + LR+E+E+RL ++GP  A+ +  E ++RL  Y+KWL +L+ G+GE  T E + V
Sbjct:   91 GKRVQDIEPEGSLWPNLPTFKQFLRQESELRLMVLGPGFADSIRDEAQWRLNLYQKWLMLLEDGVGEDRTFENSSV 166

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.

BLAST of mRNA_E_fasciculatus_S2_contig99.17895.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
Uncharacterized	0.000e+0	75.66	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	5.510e-220	81.34	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Fanconi-associated	3.830e-15	90.38	nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
VRR-NUC	3.670e-14	86.54	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
Hypothetical	3.080e-6	39.47	protein n=1 Tax=Leptocylindrus danicus TaxID=16351...	[more]