mRNA_E_fasciculatus_S2_contig99.17894.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C5_ECTSI) HSP 1 Score: 1258 bits (3256), Expect = 0.000e+0 Identity = 687/871 (78.87%), Postives = 725/871 (83.24%), Query Frame = 3
Query: 3 EAMGSLASASVPVTWTDSAGQSRTAILTRTKTKPLVCNPLPMLANLLAWMRELPPGALPENRPCVRLETLLARQSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDRSPGGGAGHGD-------LSLGAAWLLAHLMFGSDGGGDKPEEYVERARPNGKVSLSGAEANVMPLLLCPLIGWSPRPSEVIQAMSEAGGSLCAYSVEVAAFETQPGICDKAADELVHAGFARKVAFGETLVLDQKMENTCELVLKIFLGYNWDPHRTVFARVALGLTKTGPMANGVCPPDIPYLLADRQTRRSSTTAVRGGDEGLSCRGRMGGLVGDLCVRLYSWFYMYEENQGPVMPGDTNLRTPLELLKARLLPVLKGETEGDQTSRREWTGPMAQAFGLLGGAEVAYHKRSSDSVGGTASAGWVASLSKEERLLEVACLRLKQAMRMVLLVVEGVVGELQKAGGHDEAVLTLRLLVRRDQGLAGPMYSETAPDLVWAADWVTCQTRGFAYTRLAINLKTHLKRPGEEQLDVVKTACDDDCVRGGDRVDLWERYQGLHKKFGNQQTAMLRGQQQSPFWDPKVEDLHPPVETQKQGSKGARGEKGGRKIYYYDDAAPGERRWSEARSHFVEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDFRDKFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGGRDGRDWNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENEDVPKKRSRSR 2594
E MGSL+SASVPVTWTDS GQSRTAILTRTK KP CNPLPMLANLLAWMRELPPGALPENR +RLETLLA QS SK XXXXXXXXXXXXXXXXXXXXXXXXXX LSLGAAWLLAHLMFG DGGG K ER NGKVSLSGAEAN MPLLLCPLIGWSPRP EVIQAMSE G LCAYSVE+AAFETQ GIC KAADELVHAGFARKV FGE L LDQKME+ CELVLKIFL NWD R V A+VALGLTKTGP+A+G+CPPDIP L + RQ RSSTTAVRGGDE SCRGRMGGLVGDLCVRL+SW + VM +LR L LL VLKGET GD TS+REWTGPMAQAFGLLGGAEV+YHKR DS+GGTASAGWVASLSKEERLLEVACLRLKQAM+ VL+VV G+ E QK G HDEAVL RLLVRRDQGLAGPMY +TAPDLVWAADWVTC RGFAYTRLAINLKTHLKRP EEQLDVVK ACDDDCVRGGDRVDLWERYQGLHKK G++QTA LRG+Q+SP WDPKVED+HPPVETQKQGS+G GEKGGRK+YYY+DAAPGERRWSEARSH VEEV++RERY GGWLGLH ES LIMFILMLLLWEEVFD GVEAAVPHCI ISP+D DKFFTTRR+GLP RLATI +Y DRQLFSDV QRYDRLR V S WC+W+ FPKQQIMEICVAFGGKRLSD+L TLTNNL MDKGFPDVVL RPKGAD GAGGSSSGGGRD RDW ARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPA+V+RV+AENE VPKKRSRSR
Sbjct: 150 EVMGSLSSASVPVTWTDSTGQSRTAILTRTKAKPKPCNPLPMLANLLAWMRELPPGALPENRLRIRLETLLALQSPSKSVSRQSSTIGKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGAAWLLAHLMFGMDGGG-KATGPFEREILNGKVSLSGAEANAMPLLLCPLIGWSPRPREVIQAMSEGAGILCAYSVELAAFETQTGICGKAADELVHAGFARKVEFGEMLALDQKMEDACELVLKIFLC-NWDVDREVRAQVALGLTKTGPVASGLCPPDIPSLFSGRQKWRSSTTAVRGGDERSSCRGRMGGLVGDLCVRLHSWCHQ-------VMRAGRDLRVLL------LLQVLKGETAGDLTSQREWTGPMAQAFGLLGGAEVSYHKRHRDSIGGTASAGWVASLSKEERLLEVACLRLKQAMKWVLVVVRGLAEESQKKGEHDEAVLIFRLLVRRDQGLAGPMYRDTAPDLVWAADWVTCDQRGFAYTRLAINLKTHLKRPREEQLDVVKAACDDDCVRGGDRVDLWERYQGLHKKCGDRQTASLRGRQRSPLWDPKVEDIHPPVETQKQGSQGTLGEKGGRKLYYYNDAAPGERRWSEARSHNVEEVVIRERYSAGGWLGLHGESKLIMFILMLLLWEEVFDSGVEAAVPHCIMISPLDTSDKFFTTRREGLPDRLATIGQYADRQLFSDVGQRYDRLRGVRSGWCDWNVFPKQQIMEICVAFGGKRLSDLLKTLTNNLADMDKGFPDVVLRRPKGADFGAGGSSSGGGRDERDWKARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAMVSRVVAENEAVPKKRSRSR 1005
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: VRR-NUC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC9_9PHAE) HSP 1 Score: 747 bits (1929), Expect = 1.160e-257 Identity = 493/876 (56.28%), Postives = 522/876 (59.59%), Query Frame = 3
Query: 3 EAMGSLASASVPVTWTDSAGQSRTAILTRTKTKPLVCNPLPMLANLLAWMRELPPGALPENRPCVRLETLLARQSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDRSPGGGAGHGDLSLGAAWLLAHLMFGSDGGGDKPEEYVERARPNGKVSLSGAEANVMPLLLCPLIGWSPRPSEVIQAMSEAGGSLCAYSVEVAAFETQPGICDKAADELVHAGFARKVAFGETLVLDQKMENTCELVLKIFLGYNWDPHRTVFARVALGLTKTGPMANGVCPPDIPYLLADRQTRRSSTTAVRGGDEGLSCRGRMGGLVGDLCVRLYSWFYMYEENQGPVMPGDTNLRTPLELLKARLLPVLKGETEGDQTSRREWTGPMAQAFGLLGGAEVAYHKRSSDSVGGTASAGWVASLSKEERLLEVACLRLKQAMRMV--------LLVVEGVVGELQKAGGHDEAVLTLRLLVRRDQGLAGPMYSETAPDLVWAADWVTCQTRGFAYTRLAINLKTHLKRPGEEQLDVVKTACDDDCVRGGDRVDLWERYQGLHKKFGN----QQTAMLRGQQQSPFWDPKVEDLHPPVETQKQGSKGARGEKGGRKIYYYDDAAPGERRWSEARSHFVEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDFRDKFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGGRDGRDWNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENEDVPKKRSRSR 2594
E M SL+SASVPVTWTDS GQSRTAILTRT+ +P CNP PMLANLLAWMRELPPGALPENR VRLETLLA QS S XXXXXXXXXXXXXXXXXXXXX DLS GAAWLLAHLM ER PNGK AMSE GGSLC YSVEVAAFET GICDKAADELVHAGFARKV FGE L LDQK TGPMA+G+CPPDIP L + RQT RSST AVRGGD+ SCRGRMGGLVGDL +R+ LL LL VLKGET GD TSRREWTGPMAQAFGLLGGAE YHKR DS+GGT SA WVASL KEERLLEVACLRLKQAM+ V L+VV G+ K G HDEAVLT RLLVRRDQ AYTRLA NLKTHLKRP EEQLDVVK ACDDDCVRGGDRVDLWERYQ LHK+FG QQTA L+ QQ+SP WDPKVED+HPPVETQKQGS+G GEKGGRK+YYY D T LG C EEVFD GVEAAVPHCI ISP+D DKFFTTRR+GLPGRLA IR+Y DRQLFSDV QRYDR W AFG L +V P A GG++ DGRDWNA THFGLGWQGHG WEVEVVEVKSKGDTI KEQKAWLAELEDIGVPA+V+RV+AENE VPKKRSRS+
Sbjct: 153 EVMQSLSSASVPVTWTDSTGQSRTAILTRTEARPKPCNPFPMLANLLAWMRELPPGALPENRLRVRLETLLAPQSPSNNKXXXXXXXXXXXXXXXXXXXXX----------------------------DLSRGAAWLLAHLMLTGP---------FEREIPNGK------------------------------AMSEGGGSLCTYSVEVAAFETHTGICDKAADELVHAGFARKVEFGEMLALDQK---------------------------------TGPMASGLCPPDIPSLFSGRQTWRSSTKAVRGGDKRSSCRGRMGGLVGDLGLRV--------------------------LL---LLQVLKGETAGDLTSRREWTGPMAQAFGLLGGAEATYHKRRRDSIGGTVSADWVASLWKEERLLEVACLRLKQAMKWVSNLSKPSVLVVVRGLAEGSHKDGEHDEAVLTFRLLVRRDQ----------------------------AYTRLATNLKTHLKRPREEQLDVVKAACDDDCVRGGDRVDLWERYQSLHKQFGGCTGTQQTASLKRQQRSPLWDPKVEDIHPPVETQKQGSQGILGEKGGRKLYYYIDG-------------------------TVPVLGWDCT-------------EEVFDSGVEAAVPHCILISPLDMSDKFFTTRREGLPGRLAMIRQYADRQLFSDVGQRYDR----------W-------------AFGDHSL--------------------IVAKIPH-AFYCCGGTAQIELGDGRDWNATTHFGLGWQGHGQVWEVEVVEVKSKGDTIRKEQKAWLAELEDIGVPAMVSRVVAENEAVPKKRSRSQ 789
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C7_ECTSI) HSP 1 Score: 657 bits (1694), Expect = 1.890e-220 Identity = 379/754 (50.27%), Postives = 473/754 (62.73%), Query Frame = 3
Query: 486 PNGKVSLSGAEANVMPLLLCPLIGWSPRPSEVIQAMSEAGGSLCAYSVEVAAFETQPGICDK---------------------------------AADELVHAGFARKVAFGETLVLDQKMENTCELVLKIFLGYNWDPHRTVFARVALGLTKTGPMANGVCPPDIPYLLADRQTRRSSTTA--VRGGDE-----GLSCRGRMGGLVGDLCVRLYSWFYMYEENQGPVMPGDTNLRTPLELLKARLLPVLKGETEGDQTSRREWTGPMAQAFGLLGGAEVAYHKRSS-------------DSVG-GTASAG--WVASLSKEERLLEVACLRLKQAMRMVLLVVEGVVGELQKAGGHDEAVLTLRLLVRRDQGLAGPMYSETAPDLVWAADWVTCQTRGFAYTRLAINLKTHLKRPGEEQLDVVKTACDDDCVRGGDRVDLWERYQGLHKKFGNQQTAMLRGQQQSPFWDPKVEDLHPPVETQKQGSKGARGEKGGRKIYYYDDAAPGERRWSEARSHFVEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDFRDKFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGG-----RDGRDWNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENE 2564
P ++ L G EA + LL CPLIGWSPRP +V++A+SE GGSL AYS+ + F+T G+ D A DELV G+ARK A L L KME+TC+ VLKIFLG +WDP R V AR+ LGL K PM +CPP +P L +Q R T+ RG G+ GRM GLVGDLCV+L+ W Y +G G ++ + L V ET G S W+GPMA+A GLLGGA VA+ +S D + G G W+A+LS+E+R E AC RLK A V+ V+ +V LQK ++ AV+ LRL+VR DQGLAG Y E APDLVWAADWVT + RG+AYTRLAINLK HLK PG QL+ V ACDDD V+GGDRV+L ERY LHKKFG+ Q L+ ++ + + E L +ETQK+G++ R + GGRK+Y+ D GE RW E S VEEVL+RERY +GGWLGLHCES+L MF+ +LLLWEEVFD V AA+PH I SP+D +DKFF +RR+GL RL TI R +D QL+ DV QRYDR V+++WC+W+ FPKQQ+MEIC AFGG+RLSD+L+T T + + GFPDVVLWRPK +D+G S SGGG +G DW+A+THFGLGW+G+G GWEV+VVEVKSK D S QKAWL ELE+ VPA+VTRVLAE E
Sbjct: 181 PERQIGLYGGEAAALSLLPCPLIGWSPRPEDVMEALSEGGGSLRAYSISPSEFDT--GVADNVRGQEVTPDIPKVKDLGVEQKREAAGGGGRAQAAVDELVRVGYARKRAILGLLTLTPKMEDTCKAVLKIFLGQDWDPQRDVMARITLGLIKMAPMTRRMCPPAMPILWEAQQARNFVATSGLCRGRSSENQGIGVELDGRMSGLVGDLCVKLHLWCYKILRPRG----GSRDIEL------SDLNEVTTNETNGHPASPLVWSGPMAKALGLLGGA-VAHSSGTSIXXXXXXXXXXKVDEIAVGDGGGGHRWIAALSREKRTREAACFRLKDAASRVVSVIGSIVEGLQKQKTYEVAVMLLRLMVRSDQGLAGSDYREAAPDLVWAADWVTSKHRGYAYTRLAINLK-HLKNPGRRQLETVMEACDDDGVQGGDRVELRERYDFLHKKFGDSQDTPLKERR----FRYEEEVLVVNMETQKEGNQ--RSKSGGRKLYF-DKPDVGEPRWGERNSLNVEEVLLRERYRSGGWLGLHCESSLNMFLTVLLLWEEVFDERVHAALPHVIMSSPLDMQDKFFCSRREGLSRRLRTISRSSDEQLWLDVGQRYDRFSGVVAIWCDWNRFPKQQVMEICAAFGGRRLSDLLSTTTTTITQLRFGFPDVVLWRPK-SDKGVAESRSGGGSGTGEEEGLDWSAKTHFGLGWEGYGQGWEVQVVEVKSKDDITSHAQKAWLMELENARVPAMVTRVLAEKE 912
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 243 bits (620), Expect = 8.810e-64 Identity = 149/278 (53.60%), Postives = 179/278 (64.39%), Query Frame = 3
Query: 1752 VETQKQGSKGARGEKGGRKIYYYDDAAPGERRWSEARSHFVEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDF--RDKFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGGRDGRD-----WNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENE 2564
++TQK+G++ R + GGRK+Y+ D GE RW E S VEEVL+RERY +GGWLGLHCES+L MF+++LLLWEEVFD V AA+PH I + +DKFF +RR+GL RL TI R +D QL+ DV QRYDR FPKQQ+ C L N + R GFPDVVLWRPK +D+GA S SGGG D W ++THFGLGW+G+G GWEV VEVKSK DT S QKAWL ELE+ VPAIVTRVLAE E
Sbjct: 757 MDTQKEGNQ--RSKNGGRKLYF-DKPDVGEPRWGERNSLNVEEVLLRERYRSGGWLGLHCESSLNMFLMVLLLWEEVFDDRVHAALPHVITARNMKHAGKDKFFCSRREGLSIRLRTISRSSDEQLWLDVGQRYDR-------------FPKQQVW--CDRAWRYYLD---NDRASKRRRF--GFPDVVLWRPK-SDKGAAESRSGGGSGSGDEKGLHWGSKTHFGLGWEGYGQGWEV--VEVKSKDDTTSHAQKAWLMELENARVPAIVTRVLAEKE 1008
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH2_9PHAE) HSP 1 Score: 162 bits (411), Expect = 8.370e-39 Identity = 134/368 (36.41%), Postives = 178/368 (48.37%), Query Frame = 3
Query: 3 EAMGSLASASVPVTWTDSAGQSRTAILTRTKTKPLVCNPLPMLANLLAWMRELPPGALPE-NRPCVRLETLLARQSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDRSPGGGAGHG--------------DLSLGAAWLLAHLMFGSDGGGDKPEEYVERARPN-GKVSLSGAEANVMPLLLCPLIGWSPRPSEVIQAMSEAGGSLCAYSVEVAAFETQPGICDKAADELVHAGFARKVAFGETLVLDQKME-----NTCELVLKIFLGYNWDPHRTVFARVALGLTKTGPMANGVCPPDIPYLLADRQTRRSSTTA--VRGGDE-----GLSCRGRMGGLVGDLCVRLYSWFY 1022
+AM + + SVP+TWTDS G RT L +TK KP VCNPL MLA LLAWMRE PG LPE NRP + L Q+SS XXXXXXXXXX +LS GAAWLLAH+MFG GG + P+ G++ L+G EA + LL CPLIGW PRP +V++A+SE GGSL AYS+ + F+ G+ DK + V + + L ++Q+ + + + + + R V + L + PM + PP +P L +Q R + T+ RG G+ GRM GLVGDLCV+L+ W Y
Sbjct: 170 QAMAAGSGTSVPLTWTDSKGFKRTTSLIQTKAKPKVCNPLLMLATLLAWMREFSPGVLPESNRPVLPKALLAPDQASSSAATSALQSNNNGSKSNIRSNSSGNNSGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTKEKFETELSPGAAWLLAHMMFGRGSGGQQQRVSSYAQVPHKGEIGLNGGEAAALSLLSCPLIGWCPRPEDVMEALSEGGGSLRAYSISPSEFDV--GVADKVWGQEV----TPDIPTVKDLGVEQERQADGGGGRAQAAVDELVRVGYARKRAVLGLLTL-TPEMAPMTRRMSPPAMPILWGAQQARNIAATSGVCRGRSSENQGFGVQPDGRMSGLVGDLCVKLHLWCY 530
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GUH1_MICPS) HSP 1 Score: 79.7 bits (195), Expect = 1.810e-11 Identity = 96/358 (26.82%), Postives = 136/358 (37.99%), Query Frame = 3
Query: 1500 QTRGFAYTRLAINLKTHLKRPGEEQLDVVKTACD----DDCVRGGDRVDLWERYQGLHKKFGNQQTAMLRGQQQSPFWDPKVEDLHPPVETQKQGSKGARGEKGGRKIYYYDDAAPGERRWSE---ARSHFVEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDF-RDKFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGGRDGRDWNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRV 2549
+ RG Y RL IN HL R L ACD D VR GDR+ + R L +K + T R + W+ ++ + Q G+ EK Y + GE S A H+ EE G W G+H ES M L LL+ +V V +P+D D F RR + L+ IRR ++ DV +RY W ++ +I + GG L++V+ + + G PD++LWR + +V+ VEVKSK D +S +Q+AWL L D GV V RV
Sbjct: 613 ERRGTWYLRLIIN-SNHLGR-----LKDATQACDRALQDPWVRCGDRLGIQRRALRLARKVKSWGTLGARWRSDI-LWEAPIDSIRA------QALNGSVREK----KRYCTISEVGEATVSVEELAIMHYAEED-------AGSWRGVHSESRAWM-TLFGLLFADVILSPVPGVFHGPFQSAPLDLGTDSFVEVRRDDITKILSEIRRGEGPKIVRDVWRRY---YGTAIYGVSWVLLSLDELCDIILGLGGAALAEVMGLIAEDTSGWTGGAPDLLLWRHSSCEP---------------------------------KVKAVEVKSKNDQLSDQQRAWLLALRDAGVTVAVCRV 909
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Match: Fanconi-associated (nuclease n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBA2_9RHOD) HSP 1 Score: 78.2 bits (191), Expect = 5.040e-11 Identity = 57/234 (24.36%), Postives = 98/234 (41.88%), Query Frame = 3
Query: 1872 VEEVLMRERYCTGGWLGLHCESTLIMFILMLLLWEEVFDCGVEAAVPHCIAISPVDFRD-KFFTTRRKGLPGRLATIRRYTDRQLFSDVDQRYDRLRDVLSVWCEWHTFPKQQIMEICVAFGGKRLSDVLNTLTNNLRTMDKGFPDVVLWRPKGADRGAGGSSSGGGRDGRDWNARTHFGLGWQGHGHGWEVEVVEVKSKGDTISKEQKAWLAELEDIGVPAIVTRVLAENEDV 2570
VEE+ ++ Y GW+G+HCE T++ + LL+W+ +F V+ + +P+D D +F+ R + +L + T ++ Q + V W + I GG+ L+ + L + GFPD+ +W+P A SS+ ++ + VEVK D +S Q+AW+ EL +G A V RV+ + V
Sbjct: 606 VEELCLQS-YGQQGWIGVHCEGTMVTSLFGLLMWDIIFCDSVDIVFQTSVQDAPLDLGDPQFYKRREASIDAQLNRLALLTVAEIALCTKQSLEDHEQVQCRGVSWSLIESVDVCYIAGCIGGRSLAHMFRLLCLDYDYWSGGFPDLTMWKP------ASDSSA------------SNLAM------------FVEVKGPRDQLSDRQRAWMHELLAVGCSAEVCRVVEPSSRV 808 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig99.17894.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig99.17894.1 >prot_E_fasciculatus_S2_contig99.17894.1 ID=prot_E_fasciculatus_S2_contig99.17894.1|Name=mRNA_E_fasciculatus_S2_contig99.17894.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=863bp MGSLASASVPVTWTDSAGQSRTAILTRTKTKPLVCNPLPMLANLLAWMREback to top mRNA from alignment at E_fasciculatus_S2_contig99:20909..34692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig99.17894.1 ID=mRNA_E_fasciculatus_S2_contig99.17894.1|Name=mRNA_E_fasciculatus_S2_contig99.17894.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=13784bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig99:20909..34692+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig99:20909..34692+ >mRNA_E_fasciculatus_S2_contig99.17894.1 ID=mRNA_E_fasciculatus_S2_contig99.17894.1|Name=mRNA_E_fasciculatus_S2_contig99.17894.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2589bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig99:20909..34692+ (Ectocarpus fasciculatus EfasUO2)back to top |