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Homology
BLAST of mRNA_E_fasciculatus_S2_contig9898.17891.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 3.200e-161 Identity = 251/262 (95.80%), Postives = 255/262 (97.33%), Query Frame = 1 Query: 103 RPSNQTETRRASGDSGGLSKRRGAPPMGPIPSMTDAALKDLIETSLNEEKTARAPLLRTSTSPSPAPLKVVLMGRVLIPSSKGTSIPTGSNGRDKPRVSRSRVHSVCLVMEDRTSSAGSYWSGSVRDITVHPGPEGREVAEKTVVTNRGWNIKGLSGVEKRDGSRETEGAAFTLTFETGRSSSPTAVGQESSYTCEGVNAAACDEILWGLLTLNRAMQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERS 888
RPS Q ETRRASGDSGGLSKRRGAPPMGP+PSMTDAALKDLIETSLNEEKTARAPLLRTSTSP+P PLKVVLMGRVLIPSSKG SIPTGSNGRDKPR SRSRVHSVC+VMEDRTSSAGSYWSGSVRDITVHPGPEGRE AEKTVVTNRGWNIKGLSGVEKRDG+RETEGAAFTLTFETGRSSSPTAVGQESSYT EGVNAAACDEILWGLLTLNRAMQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERS
Sbjct: 109 RPSTQVETRRASGDSGGLSKRRGAPPMGPVPSMTDAALKDLIETSLNEEKTARAPLLRTSTSPNPTPLKVVLMGRVLIPSSKGASIPTGSNGRDKPRASRSRVHSVCIVMEDRTSSAGSYWSGSVRDITVHPGPEGREFAEKTVVTNRGWNIKGLSGVEKRDGTRETEGAAFTLTFETGRSSSPTAVGQESSYTWEGVNAAACDEILWGLLTLNRAMQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERS 370
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Stop | 0 |
Start | 0 |
Seed ortholog score | 495.7 |
Seed ortholog evalue | 1.5e-137 |
Seed eggNOG ortholog | 2880.D7G3Y9 |
Model size | 892 |
KEGG ko | ko:K18412,ko:K19983 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000145,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005938,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0008104,GO:0008150,GO:0008289,GO:0009987,GO:0016020,GO:0016192,GO:0017016,GO:0017048,GO:0017049,GO:0019899,GO:0031267,GO:0031503,GO:0032940,GO:0032991,GO:0033036,GO:0034613,GO:0034629,GO:0035091,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044448,GO:0044464,GO:0046903,GO:0048193,GO:0051020,GO:0051179,GO:0051234,GO:0051601,GO:0051641,GO:0070727,GO:0071944,GO:0098876,GO:0099023,GO:0099568,GO:1901981,GO:1902936 |
Exons | 7 |
EggNOG free text desc. | exocyst localization |
EggNOG OGs | KOG2148@1,KOG2148@2759 |
Cds size | 888 |
COG Functional cat. | F |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03019,ko03036,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1696842632.1867602-CDS-E_fasciculatus_S2_contig9898:659..905 | 1696842632.1867602-CDS-E_fasciculatus_S2_contig9898:659..905 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 660..905 + |
1696842632.2047477-CDS-E_fasciculatus_S2_contig9898:2144..2206 | 1696842632.2047477-CDS-E_fasciculatus_S2_contig9898:2144..2206 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 2145..2206 + |
1696842632.2206147-CDS-E_fasciculatus_S2_contig9898:2544..2665 | 1696842632.2206147-CDS-E_fasciculatus_S2_contig9898:2544..2665 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 2545..2665 + |
1696842632.2317927-CDS-E_fasciculatus_S2_contig9898:2999..3102 | 1696842632.2317927-CDS-E_fasciculatus_S2_contig9898:2999..3102 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 3000..3102 + |
1696842632.2413924-CDS-E_fasciculatus_S2_contig9898:3879..3991 | 1696842632.2413924-CDS-E_fasciculatus_S2_contig9898:3879..3991 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 3880..3991 + |
1696842632.2509224-CDS-E_fasciculatus_S2_contig9898:4314..4465 | 1696842632.2509224-CDS-E_fasciculatus_S2_contig9898:4314..4465 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 4315..4465 + |
1696842632.2606876-CDS-E_fasciculatus_S2_contig9898:5168..5261 | 1696842632.2606876-CDS-E_fasciculatus_S2_contig9898:5168..5261 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9898 5169..5261 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9898.17891.1 >prot_E_fasciculatus_S2_contig9898.17891.1 ID=prot_E_fasciculatus_S2_contig9898.17891.1|Name=mRNA_E_fasciculatus_S2_contig9898.17891.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=296bp
GKSRGPSGGSRRGSAESTSDQRQRQGGGQRRRSSRPSNQTETRRASGDSG GLSKRRGAPPMGPIPSMTDAALKDLIETSLNEEKTARAPLLRTSTSPSPA PLKVVLMGRVLIPSSKGTSIPTGSNGRDKPRVSRSRVHSVCLVMEDRTSS AGSYWSGSVRDITVHPGPEGREVAEKTVVTNRGWNIKGLSGVEKRDGSRE TEGAAFTLTFETGRSSSPTAVGQESSYTCEGVNAAACDEILWGLLTLNRA MQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERS back to topmRNA from alignment at E_fasciculatus_S2_contig9898:660..5263+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig9898.17891.1 ID=mRNA_E_fasciculatus_S2_contig9898.17891.1|Name=mRNA_E_fasciculatus_S2_contig9898.17891.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4604bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9898:660..5263+ (Ectocarpus fasciculatus EfasUO2) GGCAAGAGCAGGGGGCCCTCTGGCGGCAGTCGTAGGGGCTCCGCAGAATC
CACTTCGGACCAACGGCAGCGGCAAGGCGGGGGGCAGCGGCGTCGGTCGA
GCCGGCCTTCCAACCAGACGGAAACCCGACGGGCTAGCGGCGACTCTGGT
GGCCTGTCGAAGAGACGCGGAGCCCCCCCGATGGGGCCGATCCCGTCCAT
GACCGACGCCGCCCTCAAGGACCTGATCGAAACCTCGCTCAACGAGGTGC
GCTATGCTATGCCCTTCTCCGTTGTGTGCGTTTGGTCTTATGTTTTTTTG
CGTGTTTTGTCTGTTGGTCCAGCAGCAGTGGTAGTCGCTGAATACGGCCG
CGTAGTACCAAGGATGTGGTCGGCCTTTTGTACCGGTCACCAGGTACTTA
ATATTCAGAGTAATGAAACAAGGTGATTGTTGTTCGATCAGTATCACCGG
CCTTGCACCGGGCGACCAGACATATTTGTGCGGTCTCACTACTGTGGTTC
AGCTCCGCTCGTTGGTGCCATATTCCATTTTCACGACAAACCGTTCCTTG
TTGTTGTTGCTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTCGTCGGTTTC
ACACTGTTAAGAATTGTTTTCCGGTCTGTCTCTGCTCAGTGCTGTACCTT
CTGACACATCCGTACTGGTCCAACTGACGCGGAGCCCTTCCGTGGTCACA
AGCCAACTACCCTAAAAGGGGGTACACCTTCTAATGTCCGTACTGGCCCA
ACTGACGCGGACTCCTTTCATGGTCATAACCCAACTACCCTAAAAGGGGG
TACACCTTCTAATGTCCGTGCTGGTCCAACTGACGCGGACTCCTCCCGTG
GTCACAGACCAACAACATGTACCTGAAAACAGAATGGAGTGGTACATACA
CGCTACGATAATGCAAAAGAGAAACGTACAACTGTTTTCATTTGTCGCGC
CGTTTTTCTCAAACGCTATATGAATTTCCTCATGCAAAGCTAGCTCTCAC
TCCAATGCATGTCGCGCTTTCGAAAGCTGTCTGTGTGTACATGGAGGCGT
GTTTCGTCAAAAACAATCTGGATTTCAAGGTTTGTTCTGTTGTGTTGGTT
CGGCACTTTACGTTGTGATGATGTAGACAGATACACACGAGTTTCGGTGA
GGTTTTTTTTTTTACCCCTGACTTTGGTTGTTTTTGGGTGTACGGCATGC
ACACTCTGCAACCGCTGGCGGGCCTCGATTGCCTCCGATCGTCTTCGACA
CGTTCGCTGGCATTGGCGTGGTGCTGATGAGATCCCCCCAATCCGAATGC
CCGAACCACCTTTGGCAAAATAGTTTGGCTGTAGGTGATCGGTGCTCTGT
GGGAACAATGCTCCGTCCTGTCAAGGACGCATCCTCAATGTTCGTAACAT
TTCAGGCATGCAAAATGCGTACACCCCCCTCCCCAAGTTCGCACTCACGG
CACCCCTCTTGTGCGTGTTATTTCTTACGTCGCAGGAGAAGACAGCGAGA
GCACCGCTCCTCAGGACATCCACCTCTCCCAGCCCCGCGCCTCTCAAGTA
AGTGCACCCCCGCACCTCTCAAGTAAGTGCACCGCCCATGTCTCCCCCCC
CTTCCGGCCTGTGTACCAGTAGTGCTGCGTTGCGTTCTTGGTTGAGGCAA
GGTGGGTAGGGGCCCACATATTCCAAAGAGGGTGAAAGAGCTTGGGGGTG
TCGACTCATCAGTGGCTTGAATCAAGCCACCTTGGACTACTGGTGCGTTC
TTCCCGAGCGGAAAACATCTAAGCAAACCGGCAGTGAAAACAACACTTTG
GACGCCATAGGTTCGCGCCCAACCGCTCATCAAAGCGAGCCACATCACAC
GGAATCCTACTCGCTACGCTCTTGTGCTTTTGCAGGGTGGTGCTAATGGG
ACGTGTGTTGATTCCCTCCTCCAAGGGGACGTCCATCCCGACGGGCTCCA
ACGGACGGGATAAGCCCAGAGTCAGTCGATCAAGGGTGCACTCCGTCTGC
CTGGTGGTAAGTGCCAAGACACAGACTGCCGTTTCGCTCGCAGCCGTTTG
TGCTAGTCAGCGGCGCGTACACACACGGACGACCGGCGCTGCATCCGGGG
TGGTCCAACTGACTCGGGCGAGCTCCGTGGTGTTTGTGAAAAAAAAATGT
TCTGTTACGTATGTCGATGTATAGACTGTAATGGAATCAGATGGAACAGC
ATCAGCTCCGCGGGTCCTGTATTGGTCAGTTTATATTTATATTTATATTT
TCTTATGCGTCGACCGCACTAATCGGCTGACCAATGCTCATGTGTATCTT
TCATTTTCTGTGTCTTTGTCGATATACATGATGTAATCAGATGGAAGACA
GGACCAGCTCGGCGGGATCCTATTGGTCAGGGTCCGTGAGGGATATCACC
GTGCACCCGGGCCCAGAAGGCCGCGAGGTCGCGGAGAAGACAGGTCGGGT
GGCCTGACCTTACCTCACCCCTTGTCCTGAGGGCTGACACCTGCTTGTGG
CACTTCAGACCCAAAACCCAGGCTACAGCCACCAACTAAAAGAACAGCGT
GTGCGTTTTTTGGGGGCATTCGATTTGCGAGCATACGTACGTCTGAGCTA
GTGGGGCAGTTATTGCTTCCTGTTCTACTGAGAGGGGCGTTGAAAACGGA
AAAGAAGAGAATGTATCCATCGAATCATCCGCAATCGGCGGAGTTATGGT
ATTGATTCCGACGACCGACTGGGTGTTGCTTATTGACAGGTTTCTATTGA
CCCGCGTTTGTTTGCGGAGAGATTTGAATAAACAACCAAGCGTCCCGCTG
ACTTTCTCATCCACACCAGCTCTGGCGCGCAGTTTGAGTGGAGATGGCCT
TGGAAAATCACTCTTTCTTTTTTCCAAAAGGCACGTTGTTTGTTTTATCT
CCTGCCAGCAGTTCTTCTCTACGCCAACATGTGCTGTTGCCCCGATCCAG
TCGTCACCACGTCCTCCGCTTGACTTAGGAAATATTCAAAAGTCACGCTT
GTGTTTTCGTAGTCTCGTGACGGCAGTGCTCCTGTATGTCGACGTGTGCT
TTGACGCTATTGCGGTTGCCACCACTCCGCGGCAGCTCCATGGCGCATCT
GTCTTGCCAGTCGCGATTGTTGTCAAGTCAAACTTGTTTGTCTGTTCCTC
GTGAGTAGTGCTTCTGCCTGGCGACGTGACCTTGACCCTGTTGTCCGTGT
TGCTCTTGCTGTTGTCCCAGTCGTGACGAACCGTGGGTGGAATATTAAGG
GGCTTTCTGGTGTCGAGAAGAGAGACGGGAGCAGGGAGACGGAGGGAGCG
GCGTTCACCCTTACCTTCGAGACGGGCAGAAGGTATGACGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGCGTTCTTGTTG
TTGTTGTTGTCGGTGGTGAGGATGATGGCGGTGACGCAATGGCAACAAAG
TGGGGAGAGAATTGTCGAATTGAATCAAGCCCCTCAAGAACACTGTGCCT
TGGTCAGCTAGTTCGTCCCATTCGCTCTAGTTTTTTGTAGCTCAAATGCA
GTGAAGCAAATGTTGTCGTAACCGTTTTAATCCCCTTCGTCCCGTGCGCC
GATTTTTTTGTTTTCCATTTGCAACGACACATCATTTATAAAAAAATAAA
AACAGCTCCTCGCCGACGGCGGTCGGTCAAGAGTCCAGCTACACCTGCGA
AGGCGTCAACGCGGCGGCGTGCGACGAGATCCTTTGGGGTCTTCTCACGC
TCAACAGGGCAATGCAGGAGGGTGACGAGCTAGAGCCCGTCAACGTCAGC
CTCAAGGTGATGGTGTTGCTTTCGTGTGGTGCTACGGGGAAAAGACCGCT
TCTAAGAGAGACGTTGTGGAGTATAGGGTTGTTATTTTGTCGTTGTGGTC
TACGCGTACCATGGGTATACCGCAGTGTAGGAAAGGGGAGCTCGCGGAGT
GTATGGATACCGTGAGGGAAGGAGGTGTGTATGAACCCCTTTTTCGTGGC
ACGACGATTTCGTCCGCCGTGGCCCCCCATCCGAAGCTCTCTATTCAACA
AGGAGCAAGGCCTTTCGCGCCGCAGAGACAGGGTATTGGAGCGACCGATA
AGAAGTGGGACGATTACGATCACACACGCCATCATACCGCACCACGGAAA
GAGTGTTGTGGCACATATACCGGCGGCGCCGCTATGGAATACGTGGACCA
AACAACGGTTGCCAAGGAGAAGAGGGCAATGACAAGAAACAAAACCAGTG
CCTTGGCTTACACAAACTCAAAAATATGCCCAGTTTCCGGCCTGTTTCCC
TCCACTCACAGAAAAGACTTGAGGACATACACCCCTTTCGACTGCTGCGG
TTTTATCTCGAACGGCTACTCGTTCTGTATGTTTTATGGATTTTTTCTCA
CAACAGCAGTGGCCACGAAAACATACGCTGGTATTCGGCACCAAAACGCC
AATCTTTCATGTCTCGTTCAACACACCTCACGCACGGCGCCTCCTACCCC
CCGCAACAGGAGTTAGACGCGACGGCAGTGTACCACGGCTTGGCCACGAA
GCACCCGCTCGTCCCAAAGCTGGCCAGGCAAATGCGAGCGGACGAGCGCA
GTCG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig9898:660..5263+ >mRNA_E_fasciculatus_S2_contig9898.17891.1 ID=mRNA_E_fasciculatus_S2_contig9898.17891.1|Name=mRNA_E_fasciculatus_S2_contig9898.17891.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=888bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9898:660..5263+ (Ectocarpus fasciculatus EfasUO2) GGCAAGAGCAGGGGGCCCTCTGGCGGCAGTCGTAGGGGCTCCGCAGAATC CACTTCGGACCAACGGCAGCGGCAAGGCGGGGGGCAGCGGCGTCGGTCGA GCCGGCCTTCCAACCAGACGGAAACCCGACGGGCTAGCGGCGACTCTGGT GGCCTGTCGAAGAGACGCGGAGCCCCCCCGATGGGGCCGATCCCGTCCAT GACCGACGCCGCCCTCAAGGACCTGATCGAAACCTCGCTCAACGAGGAGA AGACAGCGAGAGCACCGCTCCTCAGGACATCCACCTCTCCCAGCCCCGCG CCTCTCAAGGTGGTGCTAATGGGACGTGTGTTGATTCCCTCCTCCAAGGG GACGTCCATCCCGACGGGCTCCAACGGACGGGATAAGCCCAGAGTCAGTC GATCAAGGGTGCACTCCGTCTGCCTGGTGATGGAAGACAGGACCAGCTCG GCGGGATCCTATTGGTCAGGGTCCGTGAGGGATATCACCGTGCACCCGGG CCCAGAAGGCCGCGAGGTCGCGGAGAAGACAGTCGTGACGAACCGTGGGT GGAATATTAAGGGGCTTTCTGGTGTCGAGAAGAGAGACGGGAGCAGGGAG ACGGAGGGAGCGGCGTTCACCCTTACCTTCGAGACGGGCAGAAGCTCCTC GCCGACGGCGGTCGGTCAAGAGTCCAGCTACACCTGCGAAGGCGTCAACG CGGCGGCGTGCGACGAGATCCTTTGGGGTCTTCTCACGCTCAACAGGGCA ATGCAGGAGGGTGACGAGCTAGAGCCCGTCAACGTCAGCCTCAAGGAGTT AGACGCGACGGCAGTGTACCACGGCTTGGCCACGAAGCACCCGCTCGTCC CAAAGCTGGCCAGGCAAATGCGAGCGGACGAGCGCAGT back to top
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