Homology
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G319_ECTSI)
HSP 1 Score: 162 bits (411), Expect = 3.450e-49
Identity = 87/123 (70.73%), Postives = 98/123 (79.67%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCLHTTRFTLAWPSVYICLHMRARS 369
MCRVMGGDL+LL+EIEQNN+TWRSVEGG +IQQALIEPIEY+ VE+S VKEC VRDALA LVGGE EVETPAG+IDVLSGTEVIEVKYYKQW G+ L F PS+ LH+ A +
Sbjct: 1 MCRVMGGDLALLKEIEQNNLTWRSVEGGPAIQQALIEPIEYQHVEKSTSVKECWVRDALASLVGGEPEVETPAGNIDVLSGTEVIEVKYYKQWKHGLGQVLAYHCFH---PSLAKRLHLFAHA 120
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)
HSP 1 Score: 135 bits (341), Expect = 1.860e-34
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
+CRVMGGDLSL R+IEQN + W VEGG++IQQAL+ P++YKE ++RV+EC VRDALA LVGG EVETP+G IDVLS TEVIEVKYY+QW G+ L
Sbjct: 233 ICRVMGGDLSLCRQIEQNALGWNCVEGGEAIQQALLRPVKYKENCVTERVRECVVRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVL 333
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE)
HSP 1 Score: 130 bits (328), Expect = 9.770e-33
Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCLHTTRFTLAWPSVYICLHMRARSV 372
+CRVMGGDLSL R+IEQN + W V+GG++IQQAL+ P++ E ++RV+EC VRDALAF+VGG EVETP+G IDVLS TEVIEVKYY+ W G+ L + +P + LH+ A SV
Sbjct: 667 ICRVMGGDLSLCRQIEQNALGWNCVDGGEAIQQALLRPVKNIEDCVTERVRECVVRDALAFVVGGTTEVETPSGYIDVLSETEVIEVKYYRNWKEGLGQVLP---YQSHYPRLSRRLHLFAHSV 787
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP52_ECTSI)
HSP 1 Score: 122 bits (307), Expect = 7.930e-32
Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCLHTTRFTLAWPSVYICLHMRAR 366
M RVMGGDL LLR IE+NN+ W SV+GG+ IQ+ALIEPI++ E S RV+E +VRDALA +VGG+ E ETP G IDVLS TEVIEVK+Y W G+ L R +P + LH+ A+
Sbjct: 2 MYRVMGGDLKLLRNIERNNLAWMSVQGGEVIQRALIEPIDHTEKYVSGRVREKSVRDALALIVGGKTEQETPVGFIDVLSDTEVIEVKHYTLWKHGLGQVLSYQRH---YPHLDKRLHLFAQ 120
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH9_ECTSI)
HSP 1 Score: 103 bits (257), Expect = 2.970e-25
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 13 MGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
M GDL L R+IEQNN+ SVEGG++I+QAL++P+EY+E S RVKE + R+ALA L+GGE EVETP+G ID S VIEVKY+ +W G+ L
Sbjct: 1 MRGDLGLCRQIEQNNLVRGSVEGGEAIRQALLQPVEYREDGESTRVKESSAREALASLIGGEREVETPSGFIDKPSDA-VIEVKYHNRWKDGLGQVL 96
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 (n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM53_9PHYC)
HSP 1 Score: 92.8 bits (229), Expect = 1.160e-19
Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVE---RSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQW 279
+CRV+GGDL L +I +N WR EGG I++ LI P++ E+E S E VRDALA GG EV TP+G IDVL+ EVIEVKYY++W
Sbjct: 246 LCRVLGGDLDLCEDINENYECWRVAEGGAEIREDLIAPVQPVELEATRESSCYPEIKVRDALALSQGGRTEVCTPSGRIDVLTSREVIEVKYYQKW 341
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: Uncharacterized (protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW94_9PHYC)
HSP 1 Score: 85.5 bits (210), Expect = 5.050e-17
Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
MCR++GGDL L I +N + W S + ++Q LI P+E+ E+ + E +RD LA +GG+ EV TP G IDVL+ TEVIEVK+Y+ + G+ +
Sbjct: 239 MCRIIGGDLRLQATINKNYLEWTSAPELEKVRQDLIAPLEHFELYKKRSGHEAVIRDKLAESLGGKTEVRTPCGRIDVLTSTEVIEVKHYRMFLHGYGQVM 339
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 ((Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG7_9STRA)
HSP 1 Score: 75.1 bits (183), Expect = 8.110e-15
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYK---------EVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
+CR+MG D+ ++ E+E N W++ +QQAL+ + + ++ R V+E VRD LA + G E+ETPAG DV++ TEVI+VK ++ W G+ L
Sbjct: 1 VCRLMGRDMKIIAEVEARNEWWQATPARSEVQQALLGALPARSWDEHSGTDDIARERSVREHDVRDDLALALDGSIEMETPAGFADVVTATEVIKVKAWRNWKHSLGQVL 110
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L807_9PHAE)
HSP 1 Score: 75.5 bits (184), Expect = 2.200e-13
Identity = 47/88 (53.41%), Postives = 57/88 (64.77%), Query Frame = 1
Query: 64 WRSV-EGGQSIQ-------QALIEPIEYKEVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
W SV E G++++ +AL +EYK +VKE +VRDALA +VGGE E ETP G IDVLS TEVIEVKYYKQW G+ L
Sbjct: 170 WESVGEEGRTVECISPRLMKALNRRVEYKP--ELFKVKESSVRDALASIVGGETEKETPVGFIDVLSDTEVIEVKYYKQWRGALGQVL 255
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Match: FirrV-1-A34 ((Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY8_9STRA)
HSP 1 Score: 67.0 bits (162), Expect = 1.000e-11
Identity = 35/105 (33.33%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1 MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALI--EPIEYK--EVERSDRVKECAVRDALAFLVGGEAEVETPAGSIDVLSGTEVIEVKYYKQWSMDSGRCL 303
+CR+M GD+ ++ E+ N W++ +Q+ L+ PI + + D +E VRD LA + G EV+ AG DV++ TEVIE+K+++ W G+ L
Sbjct: 1 VCRLMSGDMKIIAEVAVRNAWWQATPARCEVQRTLLASSPISAHSDDADSDDTTRERDVRDELALALAGNIEVQMSAGFADVVTATEVIEIKHWRTWKHALGQVL 105
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9825.17830.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 16
0 1 Expect = 3.45e-49 / Id = 70.73 Expect = 1.86e-34 / Id = 66.34 Expect = 9.77e-33 / Id = 55.65 Expect = 7.93e-32 / Id = 55.74 Expect = 2.97e-25 / Id = 56.70 Expect = 1.16e-19 / Id = 51.04 Expect = 5.05e-17 / Id = 42.57 Expect = 8.11e-15 / Id = 35.45 Expect = 2.20e-13 / Id = 53.41 Expect = 1.00e-11 / Id = 33.33 Sequence FirrV-1-A34 Uncharacterized Uncharacterized FirrV-1-A34 FirrV-1-A34 FirrV-1-A34 Uncharacterized FirrV-1-A34 Uncharacterized FirrV-1-A34
Match Name E-value Identity Description
FirrV-1-A34 3.450e-49 70.73 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more] Uncharacterized 1.860e-34 66.34 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] Uncharacterized 9.770e-33 55.65 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] FirrV-1-A34 7.930e-32 55.74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more] FirrV-1-A34 2.970e-25 56.70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more] FirrV-1-A34 1.160e-19 51.04 n=1 Tax=Feldmannia irregularis virus a TaxID=23199... [more] Uncharacterized 5.050e-17 42.57 protein n=1 Tax=Feldmannia species virus TaxID=394... [more] FirrV-1-A34 8.110e-15 35.45 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 Re... [more] Uncharacterized 2.200e-13 53.41 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] FirrV-1-A34 1.000e-11 33.33 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9825.17830.1
>prot_E_fasciculatus_S2_contig9825.17830.1 ID=prot_E_fasciculatus_S2_contig9825.17830.1|Name=mRNA_E_fasciculatus_S2_contig9825.17830.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=130bp
MCRVMGGDLSLLREIEQNNMTWRSVEGGQSIQQALIEPIEYKEVERSDRV back to top mRNA from alignment at E_fasciculatus_S2_contig9825:2130..2519-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9825.17830.1 ID=mRNA_E_fasciculatus_S2_contig9825.17830.1|Name=mRNA_E_fasciculatus_S2_contig9825.17830.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=390bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9825:2130..2519- (Ectocarpus fasciculatus EfasUO2)ATGTGCCGGGTGATGGGTGGAGACTTATCTTTGCTCCGAGAGATCGAACA
GAACAACATGACATGGAGGTCTGTCGAGGGGGGTCAGTCCATCCAACAGG
CTTTAATCGAGCCAATCGAGTACAAAGAAGTAGAGAGGTCAGACAGGGTG
AAGGAGTGTGCGGTTCGAGACGCACTGGCTTTCCTCGTCGGAGGAGAAGC
CGAGGTAGAAACACCTGCGGGTAGCATCGATGTACTCAGTGGTACCGAAG
TGATCGAGGTGAAGTACTACAAGCAGTGGAGCATGGACTCGGGCAGGTGC
TTGCATACCACTCGTTTCACCCTCGCCTGGCCAAGCGTCTACATCTGTTT
GCACATGCGGGCGAGGTCGGTACGCGCAAATATTTTAAGC back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9825:2130..2519-
>mRNA_E_fasciculatus_S2_contig9825.17830.1 ID=mRNA_E_fasciculatus_S2_contig9825.17830.1|Name=mRNA_E_fasciculatus_S2_contig9825.17830.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=390bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9825:2130..2519- (Ectocarpus fasciculatus EfasUO2) back to top