Homology
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI12_ECTSI)
HSP 1 Score: 289 bits (740), Expect = 1.330e-97
Identity = 158/185 (85.41%), Postives = 162/185 (87.57%), Query Frame = 1
Query: 1 MRKWSA-TRAPXXXXXXXXXXXXXXXXGEVQQKQLALGDVWSSSGNEGALREITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLMARKDQV 552
M+KWSA TR P GEVQQKQLALGDVWSS GNEG LREITTGLKEIRVSPWNLNLLAKLVRGLPVVEA+AQL FCKKKHT TV KAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQ+KAAPSRNRREKLMARKD+V
Sbjct: 1 MKKWSAATRGPPPQEAEQEQE------GEVQQKQLALGDVWSS-GNEGDLREITTGLKEIRVSPWNLNLLAKLVRGLPVVEANAQLLFCKKKHTTTVAKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQLKAAPSRNRREKLMARKDEV 178
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA6_9PHAE)
HSP 1 Score: 290 bits (742), Expect = 2.010e-96
Identity = 162/185 (87.57%), Postives = 167/185 (90.27%), Query Frame = 1
Query: 1 MRKWSAT-RAPXXXXXXXXXXXXXXXXGEVQQKQLALGDVWSSSGNEGALREITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLMARKDQV 552
M+KWSAT R P XXXX GEVQQKQLALGDVWSS GNEG+LREITTGLKEIRVSPWNLNLLAKLVRGLPVVEA+AQL FCKKKHT TV KAIQNALNLADMRYGLAAEELEVGEIFVTKGK+VKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLMARKD+V
Sbjct: 97 MKKWSATTRGPPPQQAEQXXXXRE---GEVQQKQLALGDVWSS-GNEGSLREITTGLKEIRVSPWNLNLLAKLVRGLPVVEANAQLLFCKKKHTTTVAKAIQNALNLADMRYGLAAEELEVGEIFVTKGKMVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLMARKDEV 277
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein AlNc14C53G4113 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBS2_9STRA)
HSP 1 Score: 115 bits (287), Expect = 6.890e-29
Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 148 REITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFD-KQIKAAPSR 513
R + T K+IRVSP L LA+ VRGLPV EA Q+KF +K+ V +QNA+NLAD+RY + E L+V E FVTKGK +KRLRIMGRGR+GI +SHL + L E + + KQ + +P R
Sbjct: 61 RTVKTIKKDIRVSPRKLTYLAQQVRGLPVEEALLQMKFSRKRRAGIVQTTVQNAVNLADIRYNIEPENLKVAEAFVTKGKYLKRLRIMGRGRSGIMHHPFSHLVIVLEEFEPEPKQGRRSPQR 183
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLD6_9STRA)
HSP 1 Score: 113 bits (283), Expect = 2.100e-28
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 148 REITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREID 480
R + T KEIRVSP L+LLA+ +RGLPV EA Q+ F K+ V K +QNA+NLAD+ YG+ L+V E FV KG +KRL+IMGRGRAGI R SHL + L+E +
Sbjct: 47 RTVRTMKKEIRVSPRKLSLLAQQIRGLPVEEALTQMTFSPKRKAAIVKKTVQNAINLADINYGIEPTNLKVAEAFVNKGLFLKRLKIMGRGRAGIKHRPHSHLTIVLKEFE 157
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8V2_9STRA)
HSP 1 Score: 113 bits (283), Expect = 2.810e-28
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 148 REITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREID 480
R + T K+IRVSP L LA+ VRGLP EA Q+KF +K+ V +QNA+NLAD+RY + E L++ E FVTKGK +KRLRIMGRGR+GI +SHL + L+E +
Sbjct: 62 RTVKTIKKDIRVSPRKLTYLAQQVRGLPAEEALLQMKFSRKRRATIVKATVQNAVNLADIRYNIEPENLKISEAFVTKGKYLKRLRIMGRGRSGIMHHPFSHLVIVLKEFE 172
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z481_9STRA)
HSP 1 Score: 112 bits (281), Expect = 4.420e-28
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 148 REITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREID 480
R + T KEIRVSP L LLA+ +RGLP EA Q+++ K+ V K +QNA+NLAD+ YG+ L++ E FV KG +KRL+IMGRGRAGI R SHL + L+E D
Sbjct: 47 RTVKTMKKEIRVSPRKLTLLAQQIRGLPAEEALVQMQYSPKRKAAIVKKTVQNAINLADINYGIEPSNLKIAEAFVNKGLFLKRLKIMGRGRAGIKHRPHSHLTIVLKEFD 157
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2H8_9STRA)
HSP 1 Score: 112 bits (280), Expect = 9.680e-28
Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 142 ALREITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDK 489
A RE+ T K+IRVSP L LA+ VRGLP EA Q+KF K+ V K +QNA+NLAD++Y + + L+V E FV KG +KR+RIMGRGR+G+ +HL V LRE D K
Sbjct: 61 AAREVKTMKKDIRVSPRKLTYLAQQVRGLPAQEALLQMKFSPKRKAAIVHKTVQNAVNLADIKYQIDPQNLQVAECFVNKGHYLKRMRIMGRGRSGVMHHPHTHLTVVLREFDPSK 176
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QX48_SAPDV)
HSP 1 Score: 111 bits (278), Expect = 1.210e-27
Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 1
Query: 148 REITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREID 480
R + T KEIRVSP L LLA+ +RGLP EA Q+ F K+ V K +QNA+NLAD+ YG+ L+V E FV KG +KRL+IMGRGR+GI R SHL + L E D
Sbjct: 47 RTVRTMKKEIRVSPRKLTLLAQQIRGLPAEEALTQMHFSPKRKAAIVKKTVQNAINLADINYGIEPSNLKVAEAFVNKGLFLKRLKIMGRGRSGIKHRPHSHLTIVLEEFD 157
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Ribosomal (protein l22 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXM3_NANGC)
HSP 1 Score: 112 bits (279), Expect = 2.530e-27
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 145 LREITTGLKEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKK-KHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLMARK 543
+RE+ + IR+SPW +NLL + VRGLPVVEA QLKF +K K V K IQNA NLA++R+ L E+L V E FV + + K + MG+GR G+ R++SH+ V L+EIDF+ + A +R +R + R+
Sbjct: 74 MREVVSRKNRIRMSPWKINLLTRQVRGLPVVEALMQLKFSRKQKGPPLVAKVIQNAANLANIRHNLHPEDLMVAEAFVNRANIQKGIMFMGKGRFGLKLRRYSHVVVRLKEIDFEGSLAACKNRFQRARWETRR 207
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLM4_9STRA)
HSP 1 Score: 114 bits (285), Expect = 2.800e-27
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 169 KEIRVSPWNLNLLAKLVRGLPVVEAHAQLKFCKKKHTITVGKAIQNALNLADMRYGLAAEELEVGEIFVTKGKVVKRLRIMGRGRAGIARRKWSHLNVTLREIDFDKQIKAAPSRNRREKLM 534
KEIR SPW LN + +L GL + EA QL+FC K+ V K ++ NLAD+R GL +LEV E F TKG ++KR++IMGRGR GI K+SH+ V LREIDF +I A + N+++K +
Sbjct: 172 KEIRQSPWKLNRVCQLAAGLTLEEALTQLRFCDIKNADLVAKILKRTSNLADIRDGLQMSQLEVAECFTTKGMMLKRIKIMGRGRNGIMHHKYSHVRVMLREIDFKLKIYQAKTLNQKKKWL 293
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9820.17828.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.33e-97 / Id = 85.41 Expect = 2.01e-96 / Id = 87.57 Expect = 6.89e-29 / Id = 52.03 Expect = 2.10e-28 / Id = 53.15 Expect = 2.81e-28 / Id = 52.25 Expect = 4.42e-28 / Id = 51.35 Expect = 9.68e-28 / Id = 50.86 Expect = 1.21e-27 / Id = 52.25 Expect = 2.53e-27 / Id = 45.52 Expect = 2.80e-27 / Id = 49.18 Sequence Uncharacterized Uncharacterized Uncharacterized Uncharacterized Uncharacterized Uncharacterized Uncharacterized Uncharacterized Ribosomal Hypothetical
Match Name E-value Identity Description
Uncharacterized 1.330e-97 85.41 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more] Uncharacterized 2.010e-96 87.57 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] Uncharacterized 6.890e-29 52.03 protein AlNc14C53G4113 n=1 Tax=Albugo laibachii Nc... [more] Uncharacterized 2.100e-28 53.15 protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepI... [more] Uncharacterized 2.810e-28 52.25 protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more] Uncharacterized 4.420e-28 51.35 protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more] Uncharacterized 9.680e-28 50.86 protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more] Uncharacterized 1.210e-27 52.25 protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QX4... [more] Ribosomal 2.530e-27 45.52 protein l22 n=3 Tax=Monodopsidaceae TaxID=425072 R... [more] Hypothetical 2.800e-27 49.18 protein n=1 Tax=Craspedostauros australis TaxID=14... [more]
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9820.17828.1
>prot_E_fasciculatus_S2_contig9820.17828.1 ID=prot_E_fasciculatus_S2_contig9820.17828.1|Name=mRNA_E_fasciculatus_S2_contig9820.17828.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=184bp
MRKWSATRAPPPQEEAEQQQQEEEEEGEVQQKQLALGDVWSSSGNEGALR back to top mRNA from alignment at E_fasciculatus_S2_contig9820:625..2482-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9820.17828.1 ID=mRNA_E_fasciculatus_S2_contig9820.17828.1|Name=mRNA_E_fasciculatus_S2_contig9820.17828.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1858bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9820:625..2482- (Ectocarpus fasciculatus EfasUO2)ATGAGGAAGTGGTCAGCCACGAGAGCCCCTCCACCGCAAGAGGAGGCGGA
GCAGCAGCAGCAGGAGGAGGAGGAGGAGGGTGAGGTGCAGCAGAAGCAGC
TTGCCTTGGGGGACGTTTGGAGCAGCAGCGGGAACGAGGGGGCCTTGAGG
GAGATCACGACGGGGCTGAAGGAGATCAGGGTCAGCCCGTGGAACCTGAA
CCTCCTGGCGAAGCTCGTCAGGGGCCTTCCGGTTGTGGAGGCGCACGCGC
AGCTCAAGTTCTGCAAGAAGAAGCACACCATCACCGTCGGGAAAGCCATC
CAG GTACAGCAGCAGTGGTGCAGCAGGTGGTGCTCTCTCGCGCTCGCTCT
CGCTGGGTGTGAGATAGGTGTTGGTGGCACCCTCCTCCCCCTCCTCTCCT
CTCTGTAGATGGGTATGTACATAGATCCCGTTCGCGGGATTCGAAGTGAA
GCGAGAGTGTAGCAGGCCAGACGCAAGTCCAGATTTGTGTGTGCAGATGC
ACACCCCGTTGGTGCCTTTTAGTCTGGCGAGGGTGAGAGACGGAGGATGC
ACACACCCTTTGTTTTGTTGATTCCCTTTGGATTACGTCTGTAACGGCAA
CAGATGCGCACAGCCCTCTGCTGATTCCTCTTGGAAAAAGCCTGTAACGA
ATAGCCTCTAATGTACATGTATGCAGTAGGTGCACACTGCACACACCCTT
GTTTGTTTCAGCTCCCCTTTTGGAAGACCAGTTTGCAAGGACATCTCCAC
GGGGAAGGAGGTGTTGGTGTTGGGGAAGGAGGTGTTGGTGTTGTTGGTGT
TGTTGTTACGGTTGTCTTCGCATTCAAAACATTTCCGTCTCCGCTCAGCA
CCTCCCATTATCCGTTCTGGTCTAAGGTCTAACTTAACTTAGCTTAACTG
ACTAGGGCGTCCTTCGTGGTCGCAGCCCAACTACTAATACAATATTACAA
CATTAGTATAATATTGTAGTCAATCAGTCTAGTAGAGATCATCCCATCAG
CAAAAACATGGGATAGGACGGGCAGGCACCAAGAACCGTGCGTGTGTTGA
TGCCCAGCCCCGCAGGAACGCGCCCCTTTCAAAACACCCACACCACGGTA
CCTCTGTTTCCTCGTTTCCCTCCCCCCTCCTAGTACGACAACACACAAAA
ATAGCCTACAAAATTCATTGCGTATCTACCTTTTCCCAGATTGTTTTTAT
CTGTGGAGGAGATGGCTTTGTTGTGTGCGTTTGTAGGATAAAAAATGAAA
GCCGTCCGTGCGATCGCGCGTGCACACCCGTTACCCCTCCACCCCACCCC
ACCATCTTCATTCCGCTCTCGTCCCCAAATCCCCCCCCAAAACACGCCTC
TGCTTCTAAAAAAGAACGCCCTCAACCTGGCGGACATGAGGTACGGCCTG
GCTGCGGAGGAACTCGAGGTGGGCGAGATATTCGTCACGAAGGGGAAGGT
GGTGAAGCGTCTCCGGATCATGGGCAGGGGCCGCGCAGGGATCGCGAG GT
GCGTCAGTTGGTACCGTTGCATGTACTAGAGGACTAGAGGTAGTCCAATT
CTATTCCGCGTGTCCCCCTATGCGCAGGGATAGCGAGGTGCGTCGGTCGG
TAACCTTGTAGTTTGTCTAATCTGATATTGCAGTTGGCACATTGGTCAAA
GTGTTTTTGAGACGGGGCTGCTGCGTCCTTGTCCGGGATACAGCCATGAT
CGAAATCAACAGTCATTTGAGCCAACCTTTGTCTGTCACGCAGGCGCAAA
TGGAGCCATCTCAACGTTACCCTAAGGGAGATCGATTTCGACAAGCAGAT
CAAAGCGGCGCCTAGCAGGAATCGGAGGGAGAAACTGATGGCCCGCAAGG
ACCAGGTA back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9820:625..2482-
>mRNA_E_fasciculatus_S2_contig9820.17828.1 ID=mRNA_E_fasciculatus_S2_contig9820.17828.1|Name=mRNA_E_fasciculatus_S2_contig9820.17828.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=552bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9820:625..2482- (Ectocarpus fasciculatus EfasUO2) back to top