mRNA_E_fasciculatus_S2_contig9813.17821.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9813.17821.1

>prot_E_fasciculatus_S2_contig9813.17821.1 ID=prot_E_fasciculatus_S2_contig9813.17821.1|Name=mRNA_E_fasciculatus_S2_contig9813.17821.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=340bp
MFTSRDLLGELARYPSKADALKTRAHEFMIPLNRMIYASAKDTLYQCLLV
MSELKVVRNLPVIAEGKVMGIVNVNDISDFSFSMEELGGKKAYMKNISQR
KGLPKGVGLDPGQNRSGWKQTFSASVGAVALPHPHKIADGGVSANKREHR
HLEVADDPTLSEDAHFVLDVAWPTETTDTVNYVGLADGVGSWRRVGVDPR
EFSHRLMHWAREYIVSMSPGSGIGGEGVTSPPPPKPHEVLMAAWEYTIGE
KASLVVGSSTACVAALDYDLEQLSFSNIGDCGVVVLRHIDSDVAGYMRER
KTPRHLRDSDLRLAFISQQQLRSFNLPYQFGYTNVPEAS*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9813:316..4687+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9813.17821.1 ID=mRNA_E_fasciculatus_S2_contig9813.17821.1|Name=mRNA_E_fasciculatus_S2_contig9813.17821.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4372bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9813:316..4687+ (Ectocarpus fasciculatus EfasUO2)
CAGGAGGTGATCGGAATGTTCACGTCCAGAGACCTCCTCGGGGAGCTGGC GAGGTACCCCAGCAAGGCCGATGCCCTCAAGACCAGGGCCCACGAGTTCA TGATCCCGCTGAACCGCATGATCTACGCCTCGGCCAAGGACACGCTCTAC CAGTGCCTCCTGGTCATGTCGGAGCTCAAGGTAGTAGGCGTTTTGGCATA GCGCTCCTCCGTGTGAAAACGGCGGAACGTTGCTAGGATTATAACTCCTC TTGTGCGAAAGGCCGAACGGGGCCTCACAAAGGGTCTTGGCGTTGTATAG CTCCGGTGTGAAAGGCCGAACGTTTGCTAAGGATTTGGCCAGCGTAGTGT TTCCGGAGCCCGGAATAAGAGGGTACTCAGCTACGCTACGTGGTCGAATC CGTGAAAACCGGTCTTGATCTTCCTACGACGGAGCCCCCGTCTTATAGAA CGTGACTTCTTATATCGGAGCCACGGCTGTACCACTGCTTGTGATGTTTT CATCTCCCGAAACGACACCATGAAACAGGTTCGGAACCTTCCGGTCATCG CCGAGGGTAAGGTGATGGGCATCGTCAACGTGAACGACATCAGCGACTTC AGCTTCAGCATGGAGGAGCTGGGCGGAAAGAAGGCCTACATGAAAAACAT CAGCCAGAGGAAAGGCCTTCCGAAGGTATGCTACAGCAGTATCAAAGAAA AACCCAGGCCCTACACTATCCCTTAAAACGTTAGCCCTCGCTCTCGCCCA CAGTCTGTGCGTGACAAGGGAAGGAAACGATGATTGAAGAAACGCGGCGT AAAAGGAAAAATACCAACGCCTGCCTCGCCGACCCTTCGGAGAATATTTT CATTGCTCTCTGCTTTTTTTTTCTTGACGTTTTGCCGGGATAGTGTAAGG GGTGTTTGCACATCGGTATCGGTATGCATTTGCCACGGGGTGTTTGGGGT TTTATTCAGGAAAAGAGTCGCCAACATGGAGCCATGTGTTTTTGTGTTTT TTCGCTTCTCGTTGGACATAGTGTACATATCGATTTGATACGCTTAGAGA ACGACATGGCGGTGGATTGACCGTACAACTTAGTGTCGTCAACGTCTATC TATTCCTTCTCCCTTTCAGAGTAAGCAAGGATTTGAAAGATGTCGAAGAA GACCGACGCGCAAAGGGGATGGGGCATAAAACGACAGACAGTGGTAGTTC CGGAGGTGTACGAACACAGTAGAGAGCGGTGGTTTTTGCCTCAGACAAAC ACCCCCTTGTCATCATGGCCGGTCCGACTCACGAGGCCTGCAGTAGAGCC ATACCTACGCCCTGCATCAACACGGCTGTCTCGATTTCCCTCTCGCGTGG ACGCCCGCCACCTCCCAATCCGCCACAGCAGTCCAGCCCCATGCGCCAGC ACACCAAAAATACGCCCGCCCTACTGTACAATGTACAATACCCACACACG GAGGAACGCCTCAGCGACAAATTACGTTCATGTATTGTATGAGGAAATAG GACAGGGATGGGGGTACGCAGACCCTATCCCTATCCCTATCCCTATCCCT ATCCCTCGCCCTTACCCAACTTCCCCCATTGCGTGCTTTATGCAACATGT TTACGTCAACGATAAACCCTACGAAGGCTACTTGCAGCCTCTCACCGGTC CCCACATATTTTTTGTAGTGATAATTTACTTTTTTTTCTTGCGTTTTATT TTTATTTTTTTTGTATTTAATGTTCTTTTTTGTCTCAGGGCGTCGGGCTC GACCCTGGGCAGAACCGGTCCGGCTGGAAGCAGACCTTCTCGGCCTCCGT GGGGGCGGTGGCCCTGCCGCACCCCCACAAGATTGCCGATGGGGGGGTCT CCGCGAACAAAAGGGAGCACAGGTGACAACGATGCCTCCTCCTCCTCCTC CTCCTCCTCCTCCTGACCTGTTTTTCTTGTTTTTTCGTTGGTCAGACGGA TAAATAGTAGATAGATAGTAGCGCGAGGATTGATGCTAGCAGGTGAGAAA GTTGCCTGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGACTTTTTAG TCATTCGAATAGAAAGTAGAGCGATGCGAGGATTGATGCTGTAACATGTG AGCAGGTTGACTTCTCCTCCTGGCTTTCTTGTTGTATCTGTTGGTCAGAC GGATAGACAGCAGCGACGAGGATCGATGGCGTTGTTGTTGTCGTCTTGAC ATTGAAATACAGACTCCCGATTCTCTCTATCCAGTACCTCCCTCCCTCTT CCAAAACACCTGATGCGGTCGGTCGATTCATTCCAACCAAAATCAAACCA ACCGCACCGTTCTGTTCGAACCGCAGGCACCTGGAGGTCGCCGATGACCC CACCCTCAGTGAGGACGCTCACTTCGTGCTGGACGTGGCCTGGCCTACGG AGACCACCGACACGGTCAACTACGTGGGCCTGGCAGACGGGGTAGGGTCC TGGCGAAGGGTGGGCGTGGACCCTAGGGAGTTCAGGTGAGGAGGAAGGGG GCTCCGGGGGGGGGGGGGGGGGGACTCTTGTGGGGGAGGAAGGGGGGGGG GGGGGGAAAGGGGGGAGGTCTGGGGGGGGGGCGGAACAATAAAAAAAAAA AAANNNNNGTTGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTACTCATGTGAATGCCTGCC GTAATTGTTGGAAAATCGTTGACCTCGTATCCTTACAACGCCATGGGGGG GGAGGGGTGTACTAATGAAATGCGTACCAATGTCGTTGGAAAATCGTTGG CGACGCATCCCTACAAGAGCGGGACGGAGCGATATTTCGCCGGCCCAGGC CACGTTTCGCAAGGATGAATGGGAGCGATGGCTCTTTTGTTTATTTTGCG CGAAGTCGCCAGGCCATGCTGACCCGTACTATGCACCTGCTTGAAGACGG ACATGAACAGTTTTTTTTTCTTTGTGCGCAGGCCACAGGCGGGAAGTTGT CAGTTATCTGTGCAGGTTTTCCAAAAGTAAACAAATATACTGGATAAAGT AGAGAATCGGCCAAGTTGGGGTTATAGGATCTGCGTTCCCCCTGCCTTGT CTCCCCGTAATGAACCTTGTCGATGTTTTCCTGTCAAAACACGCCAAGGG TTTTCATGGCGCTGACTCTTTCGCACGTTTGGTGCTCTCGCTTTGGCTGC GCAGTCACCGCCTGATGCACTGGGCACGGGAGTACATAGTGAGTATGTCT CCCGGATCGGGAATAGGGGGAGAGGGCGTCACGTCCCCTCCGCCCCCGAA GCCCCACGAGGTGCTCATGGCGGCGTGGGAATACACCATCGGGGAGAAGG CGAGTTTGGTACCCTCCTTTTCGCGAATCCCTGTCCACTGTGTCACGGAG ATGAACCTGTTGTTGTGGAGGCTTCTGCGGTTGCTGTCGCTCGAGCTGTT GCTGTTGTAGGTATTTTTTTGTTTGATGTCGCTCTAGCTGTTGCTGTTGT GGGTGTTTTTTGTCTGATGTCAAAGACCCGAGGGGGCTGAGGGTTCCCGC AGACAAGAGTACACCACGTACCTGGTACCAATGCCAACGTTCTTGCGCCC CCTTTTTCTTTTTCTTTTTGCACCAGGTGGTCGGCAGCAGCACTGCCTGC GTGGCGGCTTTAGACTACGACCTAGAGCAGCTGTCCTTCAGCAACATCGG CGACTGCGGAGTCGTAGTCCTTCGGCACATCGACTCGGACGTCGCCGGAT ACATGAGGGAGAGGAAGACGCCACGGCACCTTAGAGAGTGAGTTCCGGTT TGTCGATCGAGGCCTCGATAGGTTTAGTATGTGCATAGGATCGCGTGTGT TGGGCGCGGGGAGAAGAGGGTACCGCGCGTGAGAATGAGTTCCGGCTTGT GATCGAGGTCTGCGTAGGATTGGATAGAGGATGGCGGTTGTTGGATGTGC GAAGAAGTCATGGGTCCTGACAGAGTAAGTTCCGTTTTTTGATCGAGGTC TAAGCAGGTTTGGATGCAGGATAGCGTTTGTTGGGTGCGGGAAGATGATG GTGATACGGCACCCCCCCCTAGCCAGCGAATACCGCTTCGATCCAGCTTG CATCCCAACAGGGTTTGTTCTTGGAGTGGTGCCGATTGTACTTGACCTCA GTTTGCGCTGTTAAACTCGTGCCTTTCATTCTGCCTCGCCCCTGTCGCTC TTATCTCTCATTCGTGCTGCAACAGCTCTGACCTCCGATTGGCCTTCATC TCTCAGCAGCAGCTGCGTTCCTTCAACCTCCCGTACCAGTTCGGCTACAC CAATGTCCCCGAGGCGAGTTAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9813:316..4687+

>mRNA_E_fasciculatus_S2_contig9813.17821.1 ID=mRNA_E_fasciculatus_S2_contig9813.17821.1|Name=mRNA_E_fasciculatus_S2_contig9813.17821.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1020bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9813:316..4687+ (Ectocarpus fasciculatus EfasUO2)
ATGTTCACGTCCAGAGACCTCCTCGGGGAGCTGGCGAGGTACCCCAGCAA
GGCCGATGCCCTCAAGACCAGGGCCCACGAGTTCATGATCCCGCTGAACC
GCATGATCTACGCCTCGGCCAAGGACACGCTCTACCAGTGCCTCCTGGTC
ATGTCGGAGCTCAAGGTAGTTCGGAACCTTCCGGTCATCGCCGAGGGTAA
GGTGATGGGCATCGTCAACGTGAACGACATCAGCGACTTCAGCTTCAGCA
TGGAGGAGCTGGGCGGAAAGAAGGCCTACATGAAAAACATCAGCCAGAGG
AAAGGCCTTCCGAAGGGCGTCGGGCTCGACCCTGGGCAGAACCGGTCCGG
CTGGAAGCAGACCTTCTCGGCCTCCGTGGGGGCGGTGGCCCTGCCGCACC
CCCACAAGATTGCCGATGGGGGGGTCTCCGCGAACAAAAGGGAGCACAGG
CACCTGGAGGTCGCCGATGACCCCACCCTCAGTGAGGACGCTCACTTCGT
GCTGGACGTGGCCTGGCCTACGGAGACCACCGACACGGTCAACTACGTGG
GCCTGGCAGACGGGGTAGGGTCCTGGCGAAGGGTGGGCGTGGACCCTAGG
GAGTTCAGTCACCGCCTGATGCACTGGGCACGGGAGTACATAGTGAGTAT
GTCTCCCGGATCGGGAATAGGGGGAGAGGGCGTCACGTCCCCTCCGCCCC
CGAAGCCCCACGAGGTGCTCATGGCGGCGTGGGAATACACCATCGGGGAG
AAGGCGAGTTTGGTGGTCGGCAGCAGCACTGCCTGCGTGGCGGCTTTAGA
CTACGACCTAGAGCAGCTGTCCTTCAGCAACATCGGCGACTGCGGAGTCG
TAGTCCTTCGGCACATCGACTCGGACGTCGCCGGATACATGAGGGAGAGG
AAGACGCCACGGCACCTTAGAGACTCTGACCTCCGATTGGCCTTCATCTC
TCAGCAGCAGCTGCGTTCCTTCAACCTCCCGTACCAGTTCGGCTACACCA
ATGTCCCCGAGGCGAGTTAG
back to top