Homology
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: PH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF4_ECTSI)
HSP 1 Score: 366 bits (939), Expect = 1.520e-127
Identity = 188/200 (94.00%), Postives = 193/200 (96.50%), Query Frame = 1
Query: 1 MGDDNTGPCSCLLNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTGHESTEVRLKPDFDTVLAWRKKSEGEKD--WHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKGVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
MGD +GPCSCLLNCVRSWRERDRLRRHTE LR+GDLFKRRTFTFGFGTGHEST+VRLKPDFDTVLAWRKKSEG+KD WHEIDLNDIK +EPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQK VKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS
Sbjct: 1 MGDGYSGPCSCLLNCVRSWRERDRLRRHTELLRQGDLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDIKTVEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 200
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX0_9STRA)
HSP 1 Score: 139 bits (351), Expect = 5.290e-38
Identity = 79/213 (37.09%), Postives = 124/213 (58.22%), Query Frame = 1
Query: 16 TGPCSCLLNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTGHESTEVRLKPDFDTVLAWRKKSE-------GEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGS-------------VRDSWVESLQAVAEDVRLNPQARMAQKGVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
+G C CL W + R+ + G + +++ FGFG+ + VRL +TVL W++ + GE W +IDL D+K ++ +G L + S+ GDLLLE++ ++G+ RD+W +L + ED+R NPQ A + V +R+K+ A +Q+H A+R+IE+Q K+DAEARKAR++ E GG++YTA+AMANRS
Sbjct: 6 SGLCPCLSKLFDGWAADAQKRQDKAMMVAGTVCTKKSSRFGFGSRSDKVTVRLSAQSETVLQWQRAAADEEAGGGGEAAWTDIDLTDVKIVDKRGETGLALVSRRGDLLLEVDMDSGTGXXXXXXXXXXXAQRDAWHAALTDLTEDLRRNPQRAEASRSVAERVKEAALKQKHFAQRSIELQAAKRDAEARKARFMAEAGGLKYTAMAMANRS 218
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSX7_9STRA)
HSP 1 Score: 123 bits (308), Expect = 6.770e-32
Identity = 76/186 (40.86%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 34 LLNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTGHESTEVRLKPDFDTVLAWRKKSEGEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKGVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 591
L C S RDR R+ E L +G F+R+ TFGFG G E +++K T++ + EG EI L D++++EPKG L + SKTGDLLLE+EA +G RD WV ++ AE L + + + M+D+A +Q + KR +E+ K+ AE RKA+ +KE+GG++YTALAMA+R
Sbjct: 8 LCGCCASQEARDRQERN-EVLSKGARFRRKKLTFGFGMGWEDVTMKVKESTATLMWFTSVQEGSNSG-EIRLRDVRSVEPKGEIGLTVHSKTGDLLLEVEAVDGQTRDYWVPAIAMAAE---LPVKGPLPDRPQTSSMRDRAAKQAYFMKRDLELTAKKQLAEQRKAKLMKESGGLKYTALAMASR 188
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2W6_9STRA)
HSP 1 Score: 91.7 bits (226), Expect = 2.440e-19
Identity = 64/175 (36.57%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 88 EFLRRGDLFKRRTFTFG-FGTGHESTEVRLKPDF-DTVLAWRKKSEGEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKGV----KDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
E + RG FK+R FT G F + VR+K + + L +R+ + EI DIK+I+ G+ S+ + SKTGD+LLE+EA + RD W+ +L V L+ M + GV MK++A+++ + +R E++ KK EA+KA+++KE GG++YTAL MA R+
Sbjct: 34 EVVERGATFKKRNFTLGGFALQTKKVFVRVKQEEGNCALVYRQADDMRTAGTEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVL----LHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKEIELKKKITEAKKAKFMKEAGGLKYTALHMAGRA 204
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VC71_9STRA)
HSP 1 Score: 86.3 bits (212), Expect = 1.310e-17
Identity = 67/190 (35.26%), Postives = 104/190 (54.74%), Query Frame = 1
Query: 37 LNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTGHESTEVRLKPDFDTVLAWRKKSEGEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMA---QKGVK--DRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 591
LNC+ + R + L +G FKR+ G TG E V+L D T+L W K + K+ IDL+ IK+++ G A ++S GD++L++EAE+G +RD+WV LQ + E + NP Q G+K ++D+A++Q + AKRT E++Q ++ GM+YTALAM+NR
Sbjct: 5 LNCLAQCQTRQEGTQRLLILEKGAYFKRKKTILGLTTGTERVHVKLDKDGHTLL-W-KLHDSIKNVTTIDLHSIKSVQAHGEAGFSVTSPNGDVVLDVEAESGELRDTWVTHLQMICE--KSNPSDETEEEMQSGMKLCKVVEDRAKKQVYWAKRTQELEQRXXXXXXXXKKFAGV--GMKYTALAMSNR 188
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRR2_9STRA)
HSP 1 Score: 85.1 bits (209), Expect = 3.780e-17
Identity = 63/188 (33.51%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 37 LNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTGHESTEVRLKPDFDTVLAWRKKSEGEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARM-AQKGVKDR--MKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 591
LNC+ + R + L++G F R+ G TG E ++L D T+L W K + K+ +IDL+++ I+ +G L ++S+ GD+L+++EA++ +RD+WV LQ V ED + Q G+K R ++D++++Q + AKRT E++Q K ++ GM+YTALAM+NR
Sbjct: 5 LNCLAQCQARHEGSQRLLVLQKGAYFLRKKTILGLSTGTERIHIKLDEDGHTLL-W-KLHDSIKNATKIDLHNVNLIQAQGKTGLTITSRKGDVLMDVEADSEEIRDTWVTHLQMVCEDNGASDDTEEEVQSGLKFRKMVEDRSKKQVYWAKRTQELEQRKXXXXXXXKKFAGV--GMKYTALAMSNR 188
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T894_9STRA)
HSP 1 Score: 76.6 bits (187), Expect = 2.260e-14
Identity = 47/123 (38.21%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 238 EIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKGV----KDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
EI DIK+I+ G+ S+ + SKTGD+LLE+EA + RD W+ +L V L+ M + GV MK++A+++ + +R +++ +K EA+KA+++KE GG++YTAL MA R+
Sbjct: 7 EIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVL----LHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 125
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2R1_9STRA)
HSP 1 Score: 70.9 bits (172), Expect = 2.900e-12
Identity = 51/144 (35.42%), Postives = 79/144 (54.86%), Query Frame = 1
Query: 181 DFDTVLAWRKKSEGEKDWHEIDLNDIKNIEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLN------PQARMAQ-KGVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 591
D ++L W + D IDL D++ ++ K + ++S GDLLLEL E+ + R VE L + D R N P+ + K V +R K QA + +R IE+ Q ++ AE RK +++K++GG++YTALAMA R
Sbjct: 1 DATSLLWWASGA----DKKHIDLKDVREVKTKEELGVTITSLNGDLLLELTCEDLATRGDLVEGLSELLRDTRKNVGGGENPETAPTKGKTVMERTKKQA----YFMERDIELTQKRRAAEKRKEKFMKDSGGLKYTALAMAAR 136
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0Q8_9STRA)
HSP 1 Score: 64.3 bits (155), Expect = 3.530e-9
Identity = 31/53 (58.49%), Postives = 46/53 (86.79%), Query Frame = 1
Query: 436 KDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
K+ +K++A++ H AKR IE+Q+TK+D E RKA+YLKE+GG++YTA+AMANR+
Sbjct: 164 KNILKERAEKAAHFAKREIELQKTKRDREKRKAKYLKESGGLKYTAIAMANRA 216
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z003_NANGC)
HSP 1 Score: 61.6 bits (148), Expect = 4.920e-8
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 277 GSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKGV----KDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 594
G+ S+ + SKTGD+LLE+EA + RD W+ +L V L+ M + GV MK++A+++R ++ IE++ +K EA+KA+++KE GG++YTAL MA R+
Sbjct: 128 GAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVL----LHNFKVMGEDGVVRGQPRNMKERAEKERR--QKDIELK--RKSTEAKKAKFMKEAGGLKYTALHMAGRA 229
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig981.17815.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 19
0 1 Expect = 1.52e-127 / Id = 94.00 Expect = 5.29e-38 / Id = 37.09 Expect = 6.77e-32 / Id = 40.86 Expect = 2.44e-19 / Id = 36.57 Expect = 1.31e-17 / Id = 35.26 Expect = 3.78e-17 / Id = 33.51 Expect = 2.26e-14 / Id = 38.21 Expect = 2.90e-12 / Id = 35.42 Expect = 3.53e-9 / Id = 58.49 Expect = 4.92e-8 / Id = 39.09 Sequence PH Uncharacterized Hypothetical Uncharacterized Uncharacterized Uncharacterized Uncharacterized Hypothetical Hypothetical Uncharacterized
Match Name E-value Identity Description
PH 1.520e-127 94.00 domain-containing protein n=2 Tax=Ectocarpus TaxID... [more] Uncharacterized 5.290e-38 37.09 protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more] Hypothetical 6.770e-32 40.86 protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more] Uncharacterized 2.440e-19 36.57 protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more] Uncharacterized 1.310e-17 35.26 protein n=1 Tax=Peronospora effusa TaxID=542832 Re... [more] Uncharacterized 3.780e-17 33.51 protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more] Uncharacterized 2.260e-14 38.21 protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more] Hypothetical 2.900e-12 35.42 protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more] Hypothetical 3.530e-9 58.49 protein n=2 Tax=Proboscia inermis TaxID=420281 Rep... [more] Uncharacterized 4.920e-8 39.09 protein n=1 Tax=Nannochloropsis gaditana (strain C... [more]
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig981.17815.1
>prot_E_fasciculatus_S2_contig981.17815.1 ID=prot_E_fasciculatus_S2_contig981.17815.1|Name=mRNA_E_fasciculatus_S2_contig981.17815.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=199bp
MGDDNTGPCSCLLNCVRSWRERDRLRRHTEFLRRGDLFKRRTFTFGFGTG back to top mRNA from alignment at E_fasciculatus_S2_contig981:15465..18060-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig981.17815.1 ID=mRNA_E_fasciculatus_S2_contig981.17815.1|Name=mRNA_E_fasciculatus_S2_contig981.17815.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2596bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:15465..18060- (Ectocarpus fasciculatus EfasUO2)ATGGGCGATGACAACACGGGGCCGTGCTCTTGTTTACTAAACTGTGTGAG
ATCCTGGAGAGAAAGAGATCGCCTGCGCCGACACACAGAGTTCCTACGAC
GAG GTATGTAGTTGTTCCGCTGCTCCCTGTGATCACTGCCGCGTGAAATC
AGCAGCGAGGCTGTATCGACACGACTACATACAGCAGTACCTGCGACGTC
AGCTTTTGACGCCAGGTTTTCGTGGGGTTTCAGATGGCTGTTATGCGTGG
CCCATCGTCAAGGCGTATGCGTCTAATGACGTAACTCGCGTTAGTAGTCT
TTCCAAACCGCCTTTTGAGATCGCCCGAAACAGAGGGTTCTCGTTCATAC
CCGAGACTCAAAAGAAGAGAACGCAGCATGCGCGAGTACCGCTGTGCCTC
GGTGCAGAAGATGAGCAATGATGTTGTAAACACGGCCAAACAAAACGGGG
TGTGCATGTGACATGACGTTTCATTTCCCGAAAACCACGTGATTTCTCTG
TGCATTATGTGCATTAGACTAGTCTACGCAGAAAAATCGGTTCATCTGTG
TAGATTTCATATCGACGAACTCGGTGGGCGTCAGCTTGTGCTGCCGTGCT
GGGATACTTACTCACCATGATTCCCTGGATACTCACCATGATTCCCACAT
TATAGTTGTGTACGGGGTAACCTTGTCTAGTGGGCAAAAAATGCAACTCG
CGCTGTTGTCCCCATCTTTCAGACGGTATCACTTTCATCGTGAGTGTTCA
TGTTTTTGTGTTGGCGTCAGCTGGTACCGCCACCTGCTGTGCATGGCATT
CATCGCCACCGCTCGTTTCCCGAGCGTGATGATTGCCGTGTCAATAAACG
CATGAATGATCCATCCACACCACAGGGGATCTGTTCAAGCGAAGAACGTT
CACCTTTGGGTTCGGCACTGGCCACGAATCCACCGAGGTGCGGCTGAAGC
CAGACTTCGACACGGTCCTGGCGTGGAGAAAGAAGAGCGAGGGGGAAAAG
GACTGGCACGAGATCGACCTCAACGATATCAAGAACATAGAACCGAAAG G
TTGGCGCTGCTGCTCCTGCTGATGTTGCTTTGCTCTCTGGTACAATTCAT
CTTGCCATGGCGGACTGTACTCGAGACCCTGCCGACTGCGTTGGAGGGTG
CCAGCTGCGTACCGTGTCGTTTACCCATGGCACATCCCGCAGACCGCTGG
GAAGTACTTGTAAAACATCGCGATGGTTCGGCAGCGCGCCGTCAATGACT
GGAGTCCTGGCAGATCGCTCACGCCAGTGCTGCTTGCCACAGTTGGCCAC
GGGTGAAAAAAAGCAAGCGTGGGATCTTCAAAGACTTGAATCGTGAACGC
CGTTGTCTTTGCGTGTGCCCACTGTACGTGACGTTATCGGAACAGGTTCG
GCCAGTCTCGTCATGTCTTCCAAAACAGGGGATCTTTTGTTGGAGTTGGA
AGCTGAGAACGGGAGCGTTCGAGACAGTTGG GTGAGTGCGGGCGTGCTGT
GTTGTGCATATTTATTTGCTTATCAGACTGTGCTTGCATCGTGTATTTAC
ACCTATTGTAGAGGAACAGACAACTGCGTAAGTGGCATGAACTTATTAAC
GCCGGCTCGATGTTGGGGGTTCGGTTAGGCCACACTTTTTGTTCTCCCGA
GCACAGGCACAACACCCGAGAAACGACCATGGGTTTCCCAGAGTTGGTTT
GATTACACAGCGAACCACCAGAGATGAGGAATGGAGGATACCTCGCCTCG
TAGACCTTGAACACGAGGCAGGGGCTGTTATCAATGGGCAAGATGAAAGA
GGGGTCGCCATCGTGCGGGGCCAGGTTGTCCTTTCCACCGATGTACCAGG
TCCCCATAAGTGCCCTGATGAAAAATAATAATTCTCTCTTAATGGGAGAA
CGCGAAAGTGAGAGAACGAGCACTCTCACCCGTCATTTGTCCTAGAGAGG
ACACAGCAGTAATCATTTGACGATGGGCAAATTTGTGGATTCTCCACCCA
CAGAGCTTGAACGCACACCATCCCGGTTGAAATGGCAAGCCAGCGACCCT
GGCTTCTAGGACCACCACCAGTTTTAAGCCGCAGCAGTAGCCCTGTTAAG
TTAAAAGCCCGCCGCCCGGTACATGGTCTGAACCGGTTTGAGGGTCAGCG
AGCATGCAAGAGCAGAGCCCTCGCCAGAGAAACCGCCGTCGTTGGTTGTA
GCCTGACGAATGCGTTAACTGAGGTTGGCGCAACCAATCCTCGGACACGC
AAAACTGCAGGTGCGTTTTACTGTGCACCATAGTCGGATGGCGAGGCGAT
GCCGTGGCATAAGGTGACGTTTTTGGCTCAAACTAAGGTAGGATTGTTGC
CTTCAACCTCAGGTGGAATCTCTGCAGGCGGTGGCAGAGGATGTGCGGCT
GAACCCGCAAGCGAGGATGGCGCAAAAGGGCGTTAAGGATAGAATGAAGG
ACCAGGCCCAGCGGCAGCGACACTTGGCGAAAAGAACGATCGAGATGCAG
CAAACGAAGAAGGACGCCGAAGCGCGCAAGGCTCGCTACTTGAAAGAGAC
GGGAGGGATGCAGTACACTGCCTTGGCGATGGCAAATCGCTCTTAA back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig981:15465..18060-
>mRNA_E_fasciculatus_S2_contig981.17815.1 ID=mRNA_E_fasciculatus_S2_contig981.17815.1|Name=mRNA_E_fasciculatus_S2_contig981.17815.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=597bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:15465..18060- (Ectocarpus fasciculatus EfasUO2) back to top