mRNA_E_fasciculatus_S2_contig9807.17810.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9807.17810.1

>prot_E_fasciculatus_S2_contig9807.17810.1 ID=prot_E_fasciculatus_S2_contig9807.17810.1|Name=mRNA_E_fasciculatus_S2_contig9807.17810.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=658bp
RHRHQVVVLRGAKDRLVGVASMRFFDSNGSLNMGLQKRPFLFTDRAPFSW
DPAAPPSGREPGQDGVWCGSGGGGGGGGGGDDGVDGGRDGILSKDDWGFA
LERMREKYRLRAIDRADWLDPASLSRVDRLVAALADPDELRKHRAYQTDA
EAGLRDSPKLGGRAWGASDLLAGGGSGAFLLVSDYEMEEDNPVEHKYRKL
AHDQLRGLVDPELKPNRDERHRIDDLVAGRQDHLSMEDKDLLWKFRYCLT
DNKRALTKLLLSVDWGVDSEVAQVENLLAEWARRAPIDAPDALKLLGRER
TFQAEVVRRFAVDALRRASDDELLTFLLQLFLIERACKSLKLANFFFWYL
RVELEDATHGHIFRSVQAAFQSSMGRAPESARVLDMLLAQDQYVQAVARA
HQEACDLNAGWWAKVWAKDERLRELLKAPNLRRVPRRPKGGGGGGDGGGA
GVAGGVAEALMAEFGAASGGGGGSVPMPLDPTVQITGLEPSTAFLFKSAL
YPCVIEFTVKRDATSSDSNTTSAPAAAAAAATDDNTTGVSNTGMTGSAAA
SGGATVNGHDKDGGTATTAAAAVSSGEIQGAGGGAGPGGARDGGPPPPPP
PPPRPSPAASSWLGQAKPMESSYKVIFKSGDDLRQDQLIMQMISLMDSLL
KRVNLDLK
back to top

mRNA from alignment at E_fasciculatus_S2_contig9807:422..5367-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9807.17810.1 ID=mRNA_E_fasciculatus_S2_contig9807.17810.1|Name=mRNA_E_fasciculatus_S2_contig9807.17810.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4946bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9807:422..5367- (Ectocarpus fasciculatus EfasUO2)
CGTCATCGTCATCAGGTGGTTGTCTTGCGGGGGGCGAAGGACCGCCTCGT GGGCGTGGCGAGCATGCGCTTCTTCGACTCGAACGGCTCCCTCAACATGG GCCTCCAGAAGCGGCCGTTTCTCTTCACCGACAGGGCCCCCTTCTCTTGG GACCCGGCCGCCCCGCCCTCCGGCAGAGAGCCAGGGCAAGACGGAGTTTG GTGCGGTAGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGATGATGGTG TCGACGGTGGCCGCGACGGGATTCTCTCCAAGGATGACTGGGGGTTTGCA CTAGAGCGGGTGAGGCGTGTTTGTTTAGGGCACGTGGTGGATGTTTAGAC GCATCTCGTTCTCCTTGGGACCAATCGTCGCACATTTTGTTGGATGGGGG AGTGTGACCAGGTGTTGCGGGGAATGTTCATGCGCGTGTTGTGGTGCTGT AGGATAACGGTGTTGAGAGTTCTGTTGAGGAACTGGAAGCCCCGTTGTCC GCAGCTAAAATATCAAAGTGGCGAACTCAGACGCAGTTCTTGCCATTGAG TGAAAAAAGACGAGCTGTATGGCCTCACGATTTCATCATCTGTGATATGG CCGACACTGGTGCCGCCGTCGCATACAAGCACCTCCCCCCGTCTTCTCCC CGTCGTCCTATTTTGTGAACATGTAGAAGACCTTACCATTATTTTCTCTC CCCCACGGATCCCTCGCACACGCCTTGCGAAACACTGCGCGCACAACTAC TCAACACGCACGCACAACGAAAGATGCGAGAGAAGTACCGGCTGCGGGCG ATAGACAGAGCGGACTGGCTCGACCCGGCGTCCCTCTCGAGAGTCGACCG CCTGGTGGCGGCCCTGGCCGACCCGGACGAGCTCCGCAAGCATCGCGCGT ACCAGACCGACGCGGAAGCCGGCCTCCGCGACTCGCCGAAGCTCGTCCTC GAGATGCCGTGCTTCGCGCACCCGATCATCCACGAGGAACGACCGTACCC CGGGGTGCCCGGGGTGCCCGGCGGGGGAACCGGTGGCGGAGGTGGCGGCG GCACCGGCGGCGCCGGCGCGACGCAGCAGAGGCAAGACGGGGTGGTGGTG GCGGCGGCGGCGGCGGCGGCGGCGGCGGCTACAGCAGTCAAAGGCGAAGC CGCGGCGGGGGAGGCGGGGACCGGGGGGGGTATGGGGGAGGGCGGGCGGG CGTGGGGGGCGTCTGATCTTCTCGCCGGCGGGGGCTCGGGCGCGTTCCTG CTGGTGTCGGACTACGAGATGGAGGAGGACAACCCGGTGGAGCACAAGTA CAGGAAGCTGGCGCACGACCAACTCAGGGGCCTGGTCGACCCCGAGCTCA AGCCCAACCGCGACGAGAGGCACAGGATCGACGACCTCGTCGCCGGGCGG CAGGACCACCTGAGCATGGAGGACAAGGACCTGCTCTGGAAGTTCCGGTA CTGCCTCACGGACAACAAGAGGTGCGGAGGGGCGTGGAAGCTTCTTGTTT TGAGCGTTCCGGGTTCGATTTTATCGCGTGGTGCCTGCCTGCCTGCCTGG CTACACTACCCCCCCAAGACTTGGCGGCGGTGGCGGCTTGCAGTCGAGGC AAATACACGAGAAGGACCGTGTGCCGAGGGACTGAGTTGGAATGACACCG GCAGTACGTAGTGAGTGATCGCAACCTCAGCCTTGGGTGTACGCATGACA CGACCCGGATGAGGGGCCGCTACGTGGGTACGAGGAAGACTCCTTGCATG TCGCTGCCCCCACCCCCCCTCCCGCGTACCCCCTCTGCTTTATCCTCACG TCCCCCCCCCCCCTCGCCTTTTCGTCGCGTTTTTGGGACAACACGGAACT CGACCCAGGGCGTTGACCAAGCTGCTTCTGTCGGTGGACTGGGGGGTAGA CTCCGAGGTGGCTCAGGTCGAGAACCTCTTGGCCGAGTGGGCCCGGCGAG CTCCCATCGACGCCCCCGACGCGCTCAAGCTCCTCGGCCGCGAGCGAACG TTCCAGGCCGAGGTAGTGCGTCGCTTCGCCGTGGATGCGCTCCGCAGGGC CTCGGATGACGAGCTCCTGACCTTCCTGCTGCAGCTCGTGCAGGCGCTGC GGTATCAGCCGACCGGAGGGGGGGCGGAGCCGGGCGCAGGCGGTGGTGAT GGCGGAGCGGGGGGTGGGGGGGGCGCGGGAGGGGGCGTGTCGGCGTTGGC GCAGTTTTTGATCGAGCGCGCCTGCAAGAGCCTGAAGCTGGCCAACTTCT TTTTCTGGTACCTCCGGGTGGAGCTCGAGGACGCGACCCACGGGCATATC TTCCGGTCGGTGCAGGCGGCGTTCCAGAGCAGCATGGGGCGGGCCCCGGA GTCCGCGCGAGTGCTGGGTGAGGATGTAGAGAAGAAGCGAATGCTTGGTT CTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGCGGAGTTGGC GTTGGAGTTGGAGTTGGAGTTGGCACGTTCATAATGTTGTCGTTGTTGGT GGTGTGCGTCAACAGCAGTTTTGGACGTTGGGCTTTGGCATAGGCAGGGA GAGCATGTCGTGCCATTCTTGGCTACCGTATGACATGTATGTGCTCAAAG CAGCAGTGCTTTACGTAGTTAACATGGAGGAGACACTACGAAATGTGGCG TCATATTGTTCTTGACGCAGCGGCGGGCAGCGGTGATGACTGCTCACACG CTTGCCGTGTTCCTTCTGCGGCTGGTTGTCTTGGTTTGGCCTCTTTCTCG CCAATCCCTTGCCATGCCGGTCTCTGTTGGGTCCCCTTCGCTATCAACAG TGATGTATTGGGCCTCAACAACCTACAGTAGCTTGAATCGAGGTGCCCCT GGAGTATGTTTTACCTAGCTCACGGAAAGTGTATGTAGATATTTTCAAAG GCGCCCAACGACGTTCCACGCACCGGCCATACCGTCCCCTTACATCAGTG AAGGCGACCCCCGCCCTCCCCCTGCCAACCCCGGCACTCGCCCGCGGTTC TTCTCATGGTTTCCGTGGCAATGATCAACCAACAAACTCGACATTAAGTA TGCCTTTTAATATCGAAGTGTCCCCCCCCCCCCCCCCCCCCCCACCGCCA CAAAAAACACACCCACACCCCGCCACCCCCTTTCAAAAAAACCACCCCAC CCCACAACNNNNNNNNNNTTTCGTGGCAAACATCAAACAACACACCCGCC ATTAAGTATCCCTTTTAAAAGCGAAGGGCCCCCCCCCCCCCCCCCGCCCC TGACACGGCACGAAAACGATGACACACACCGGGCGCATCTTTCTGAAGAC ATGCTGCTCGCCCAAGACCAGTACGTGCAAGCGGTGGCCCGCGCCCACCA AGAAGCTTGCGACCTGAACGCCGGCTGGTGGGCCAAGGTGTGGGCCAAGG ACGAGAGGCTGCGGGAGTTGCTCAAGGCGCCGAATCTTCGCCGCGTGCCG AGGCGCCCCAAGGGTGGCGGCGGCGGCGGCGACGGCGGCGGGGCGGGAGT GGCAGGAGGAGTAGCGGAGGCGCTGATGGCGGAGTTCGGCGCCGCCAGCG GCGGCGGAGGGGGGAGCGTGCCGATGCCCCTAGACCCGACGGTGCAGGTG CGTTCCTGTCTAGCGGGGGACCCTCGTGTCAGGTGGTGTGGGGGTCCCCC CAAGCGGCCACGGCGGTACTGCTTGAAACAGTCGGAGTGGCTACCGAGGG TTGCAGAGGATGACACACACCCCTTGGACCTATTTTTTTGAAGCTCGATT TGCTCGACGAGGATGCCAGAATCAAACGATACGCGTGTAGGAAAGCTCTC GATGAGACAGACGGTTCACACGCCGCCGTTTTCGGCACCGGTACTTATTT TGCCGCAGAGTATTCGAGCTTTGAACATCGGTTCAGGGTGTGTTATCTTG TTCAACCTATTGTACGGTGTTTTTGTCGTTAGGACTTGTCGTCCCACGGC GTGCGTGTGTGCGTGCCATCACGCGGAGTGAGTTGTGTCGATTCATAGCT ACGATTGGTCGCCCTGAAATGTTAGCTAGCTTGCTGTGATCTTGTGTGTA AATTGATGCCGACCTGCTTCCTCGCTCGCTGTGCGCTTTGTCTTCCCTTC AACTCCAGATCACAGGCCTGGAGCCCAGCACGGCCTTCCTCTTCAAGAGC GCCCTCTACCCTTGCGTCATCGAGTTCACGGTAAAAAGAGACGCAACAAG CAGCGACAGCAACACTACCTCTGCCCCCGCCGCCGCTGCCGCCGCCGCGA CAGACGACAATACCACAGGTGTTTCTAACACGGGGATGACAGGTAGCGCG GCCGCCTCAGGTGGGGCCACCGTCAACGGGCATGATAAGGACGGTGGTAC GGCTACGACGGCGGCGGCCGCGGTGTCTAGCGGAGAGATTCAGGGCGCCG GCGGCGGTGCAGGCCCGGGTGGAGCTCGGGACGGAGGGCCGCCCCCGCCG CCGCCGCCGCCGCCACGGCCGTCGCCCGCCGCTTCCTCATGGCTGGGCCA GGCCAAGCCCATGGAGAGTTCGTACAAGGTGAATGGCGCGGTCTTGTGAC CCAAGGACACTGAGACGTAGAGCGTGTTTTGTGGACGGAGAGGGTGAAGT TGGATGATGGCCGGGGGGCGGGGGGGGGTGTTTGTGGCACTTGAGGACGT CGGCGGGGGGGCATCGGAGCGGGTACACAGTTAGGGCATCGACAACCTGG TGTAGACCCCACTCAGCCACGGGCCCAGTGTTTCAGAGCACAGCCCCGAT CGATACAAGGGGCAACCGCAGCGGAGTACAATAGGCGTCGGGAGTCATTC GCCAACCCCGTTGTTTTCTCTGTGGTGCCTTCCTTCTATTACAGGTGATC TTCAAGAGCGGCGACGACCTTCGGCAGGACCAGCTGATCATGCAGATGAT CTCGCTCATGGACTCCCTTCTCAAGAGGGTCAACCTCGATCTCAAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9807:422..5367-

>mRNA_E_fasciculatus_S2_contig9807.17810.1 ID=mRNA_E_fasciculatus_S2_contig9807.17810.1|Name=mRNA_E_fasciculatus_S2_contig9807.17810.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1974bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9807:422..5367- (Ectocarpus fasciculatus EfasUO2)
CGTCATCGTCATCAGGTGGTTGTCTTGCGGGGGGCGAAGGACCGCCTCGT
GGGCGTGGCGAGCATGCGCTTCTTCGACTCGAACGGCTCCCTCAACATGG
GCCTCCAGAAGCGGCCGTTTCTCTTCACCGACAGGGCCCCCTTCTCTTGG
GACCCGGCCGCCCCGCCCTCCGGCAGAGAGCCAGGGCAAGACGGAGTTTG
GTGCGGTAGCGGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGATGATGGTG
TCGACGGTGGCCGCGACGGGATTCTCTCCAAGGATGACTGGGGGTTTGCA
CTAGAGCGGATGCGAGAGAAGTACCGGCTGCGGGCGATAGACAGAGCGGA
CTGGCTCGACCCGGCGTCCCTCTCGAGAGTCGACCGCCTGGTGGCGGCCC
TGGCCGACCCGGACGAGCTCCGCAAGCATCGCGCGTACCAGACCGACGCG
GAAGCCGGCCTCCGCGACTCGCCGAAGCTCGGCGGGCGGGCGTGGGGGGC
GTCTGATCTTCTCGCCGGCGGGGGCTCGGGCGCGTTCCTGCTGGTGTCGG
ACTACGAGATGGAGGAGGACAACCCGGTGGAGCACAAGTACAGGAAGCTG
GCGCACGACCAACTCAGGGGCCTGGTCGACCCCGAGCTCAAGCCCAACCG
CGACGAGAGGCACAGGATCGACGACCTCGTCGCCGGGCGGCAGGACCACC
TGAGCATGGAGGACAAGGACCTGCTCTGGAAGTTCCGGTACTGCCTCACG
GACAACAAGAGGGCGTTGACCAAGCTGCTTCTGTCGGTGGACTGGGGGGT
AGACTCCGAGGTGGCTCAGGTCGAGAACCTCTTGGCCGAGTGGGCCCGGC
GAGCTCCCATCGACGCCCCCGACGCGCTCAAGCTCCTCGGCCGCGAGCGA
ACGTTCCAGGCCGAGGTAGTGCGTCGCTTCGCCGTGGATGCGCTCCGCAG
GGCCTCGGATGACGAGCTCCTGACCTTCCTGCTGCAGCTCTTTTTGATCG
AGCGCGCCTGCAAGAGCCTGAAGCTGGCCAACTTCTTTTTCTGGTACCTC
CGGGTGGAGCTCGAGGACGCGACCCACGGGCATATCTTCCGGTCGGTGCA
GGCGGCGTTCCAGAGCAGCATGGGGCGGGCCCCGGAGTCCGCGCGAGTGC
TGGACATGCTGCTCGCCCAAGACCAGTACGTGCAAGCGGTGGCCCGCGCC
CACCAAGAAGCTTGCGACCTGAACGCCGGCTGGTGGGCCAAGGTGTGGGC
CAAGGACGAGAGGCTGCGGGAGTTGCTCAAGGCGCCGAATCTTCGCCGCG
TGCCGAGGCGCCCCAAGGGTGGCGGCGGCGGCGGCGACGGCGGCGGGGCG
GGAGTGGCAGGAGGAGTAGCGGAGGCGCTGATGGCGGAGTTCGGCGCCGC
CAGCGGCGGCGGAGGGGGGAGCGTGCCGATGCCCCTAGACCCGACGGTGC
AGATCACAGGCCTGGAGCCCAGCACGGCCTTCCTCTTCAAGAGCGCCCTC
TACCCTTGCGTCATCGAGTTCACGGTAAAAAGAGACGCAACAAGCAGCGA
CAGCAACACTACCTCTGCCCCCGCCGCCGCTGCCGCCGCCGCGACAGACG
ACAATACCACAGGTGTTTCTAACACGGGGATGACAGGTAGCGCGGCCGCC
TCAGGTGGGGCCACCGTCAACGGGCATGATAAGGACGGTGGTACGGCTAC
GACGGCGGCGGCCGCGGTGTCTAGCGGAGAGATTCAGGGCGCCGGCGGCG
GTGCAGGCCCGGGTGGAGCTCGGGACGGAGGGCCGCCCCCGCCGCCGCCG
CCGCCGCCACGGCCGTCGCCCGCCGCTTCCTCATGGCTGGGCCAGGCCAA
GCCCATGGAGAGTTCGTACAAGGTGATCTTCAAGAGCGGCGACGACCTTC
GGCAGGACCAGCTGATCATGCAGATGATCTCGCTCATGGACTCCCTTCTC
AAGAGGGTCAACCTCGATCTCAAG
back to top