Homology
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI)
HSP 1 Score: 376 bits (965), Expect = 1.350e-124
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 1
Query: 19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGY+LPSVPSTTPVSAPVAVEEDEDARALRELEASMAM
Sbjct: 33 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 239
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ84_9PHAE)
HSP 1 Score: 258 bits (659), Expect = 3.790e-80
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 1
Query: 208 MNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
MNMQTFNAMRSGAKAM+ ARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVP+GY+LPSVPSTTPVSAPVAVEEDEDARALRELEASMAM
Sbjct: 1 MNMQTFNAMRSGAKAMEGARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPQGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 144
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Snf7-domain-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA)
HSP 1 Score: 233 bits (595), Expect = 3.550e-69
Identity = 146/220 (66.36%), Postives = 164/220 (74.55%), Query Frame = 1
Query: 7 TRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAA-----------PQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASM 633
T + RE H+QKKIKAQLL+AKAKS DK+GALFALKRKKMYE E+NK+NGAR+TLE Q IALEGSN N+QTF AM SG KAMQ ARG+LDVD VD VMDDI++EMDIA+QIG+AIARPA+ LFDDD LL EL +EEA++EE LLA PAVP P+A P G QP A S G DLPSVP T V P A EEDED RALRELEASM
Sbjct: 31 TLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGS-SGMDLPSVP-TGDVRVPAA-EEDEDLRALRELEASM 246
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q0_9STRA)
HSP 1 Score: 175 bits (444), Expect = 2.910e-47
Identity = 109/209 (52.15%), Postives = 143/209 (68.42%), Query Frame = 1
Query: 19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDA-RALRELEASMAM 639
RE+HI+KKI+AQL +AK KS+AKDKRGA+F LKRKKMYE E+ KL GARMTLE+Q++ LE + +NMQTF A+R+GA M+ G+++VD VDD+MDDI++EM A++IG AI++P + L+DDD L ELDML E DLE+QL A +PA Q PA A + + P PS + V+ + D D LR LEASMAM
Sbjct: 36 RESHIEKKIEAQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMQTFTALRTGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDDDELAAELDMLVEEDLEKQLDAA----HQQPAPAQPARVPAQAPATAASMFTFPEAPSHAVTNIKVSGKADADELEELRRLEASMAM 240
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH)
HSP 1 Score: 175 bits (443), Expect = 3.190e-47
Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 1
Query: 19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLL--APPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPS--TTPV-SAPVAVEEDEDARALRELEASM 633
RE HI KKI A L +AK KS KDK GALFALKRKK+YE EV KL GAR+T+E+QI++LE +++N++TF AM++GA AM+ RG +D D+VDDVMD + +E DI + I +AI+RP DLF+D+ LL+EL L+ ++E + PA P A P PQ V ++ P+VP+ +PV S PVA EEDED RALRELEASM
Sbjct: 36 REEHINKKIDASLQEAKLKSQKKDKNGALFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFNDEELLDELAELDALEMEASVANTVAPAAPVAPP--PQSV-------------FNFPAVPTKAVSPVPSKPVAHEEDEDERALRELEASM 230
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA)
HSP 1 Score: 168 bits (426), Expect = 6.870e-45
Identity = 102/211 (48.34%), Postives = 134/211 (63.51%), Query Frame = 1
Query: 7 TRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 639
T + R+ H+ KKI+ QL +AK K + KDKRGAL+ LKRKKMYEGE+ K+NGAR+TLE Q+IA+EG+ N +T AM +G AM AR + VD V ++MDDI DE++ A I +AI+ PA+ + DD+ LL EL+ LEE +LE QLL PAVP DLP VP+ TP +ED D +ALRELEA+MA+
Sbjct: 34 TLEKRQVHLDKKIEQQLAEAKVKIAKKDKRGALYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDDEDLLNELNELEELELESQLLDAPAVPAT--------------------AIDLPDVPTATPEIPVQQNQEDADTKALRELEAAMAL 224
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDW8_9STRA)
HSP 1 Score: 167 bits (422), Expect = 2.490e-44
Identity = 106/213 (49.77%), Postives = 140/213 (65.73%), Query Frame = 1
Query: 1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDL-FDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASMA 636
L T + RE H+ KK+ AKAK + KDK+GALFALKRKKMYEGE++K+NG++MTLE+QI++LE + NMQTF AM+ GA AM + R + DVD VDD+M DI++EM+IA++I AIA+P D + DDD LL+EL LEE DLEE+L+ PA GV +P +PS P+ P +E+ED AL+ELEA MA
Sbjct: 37 LLTLEKREEHLFKKMDEMQAQAKAKMAKKDKKGALFALKRKKMYEGEIDKINGSKMTLETQIMSLESNVQNMQTFQAMKQGANAMANVRKQADVDNVDDLMADIQEEMEIAQEISTAIAQPIDGVGVDDDELLDELKELEELDLEEKLMEIPA----------GVNKP----------LKMPSAPTAKPA------QEEEDEAALKELEAMMA 223
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GI76_9STRA)
HSP 1 Score: 166 bits (420), Expect = 6.840e-44
Identity = 108/220 (49.09%), Postives = 148/220 (67.27%), Query Frame = 1
Query: 1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPAD-DLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPS------TTPVSAPVAVEEDEDARALRELEASMAM 639
L T + RE HI K+ +QL +AK KS+AKDKRGA+FALKRKKMYE E+ KL GARMTLE+QI+ LE +++NM+TFNAMRSGA M+ G++ VD VD++MDDI++EM A++I AI++P +L+DDD L EL+ +EE +EE + PAV AR + V + +P Y+LP P+ T P+ V E++E+ ALR LE+SMAM
Sbjct: 30 LDTLEKREQHICTKVSSQLQEAKKKSAAKDKRGAIFALKRKKMYENEIEKLQGARMTLETQIMTLESAHVNMETFNAMRSGAGQMKAIHGQISVDTVDNIMDDIQEEMATADEISRAISQPVGTELYDDDELEAELEAMEELSVEE---SKPAVAEAR-------KPSKVTNTPIP-AYNLPEPPTHKVENRTNPI---VGAEDEEELEALRRLESSMAM 235
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK)
HSP 1 Score: 166 bits (420), Expect = 7.040e-44
Identity = 101/214 (47.20%), Postives = 140/214 (65.42%), Query Frame = 1
Query: 1 LRTRQHRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEED-EDARALRELEASMAM 639
+ T RE I KI Q +AKAK KD+RGA+F LKRKKMYE E++KLNGA++ LE QI ALEG+++N + F A R+ A++ ARG +D D V++ +DDI +EM++A +IG+AI+RPA +LF+D+ LL+EL LEE +EE LLA PA P P A AVAE YDLP+ P+ ++ + + D +D ALR LEA +A+
Sbjct: 29 IETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFEDEELLDELRELEELGVEEDLLAAPAAPVRAPPAA------AVAEEAKQPAYDLPAAPTGAVAASAIQGDVDADDLDALRALEAELAV 236
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2J5_9STRA)
HSP 1 Score: 167 bits (422), Expect = 1.200e-43
Identity = 109/206 (52.91%), Postives = 138/206 (66.99%), Query Frame = 1
Query: 19 RENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADD-LFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYDLPSVPSTTPVSAPVAVEEDEDARALRELEASM 633
RE HI KI AQ +AKAK + KDK+GAL +KRKKM+E E+ K+ GARMTLE Q++ALE + MNMQTF AM G +A++ ARG +D D + D MDDI++EMD A+ I A+ P DD L DDD LL EL+M+E+ DLE++LL PP+VPT+ P AE + DLP P T+ V VE+DE A ALRELEASM
Sbjct: 84 REAHIGTKITAQTAEAKAKLAKKDKKGALICMKRKKMFENEITKIQGARMTLEQQMMALENAAMNMQTFGAMNEGKQALKAARGGMDADTIGDTMDDIREEMDEADAIATALGAPLDDALEDDDELLAELNMMEQDDLEDKLLNPPSVPTSTPVG--------AAEDIL----DLPDAP-TSQVVVDGDVEDDELA-ALRELEASM 275
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9793.17794.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.35e-124 / Id = 99.52 Expect = 3.79e-80 / Id = 97.22 Expect = 3.55e-69 / Id = 66.36 Expect = 2.91e-47 / Id = 52.15 Expect = 3.19e-47 / Id = 52.38 Expect = 6.87e-45 / Id = 48.34 Expect = 2.49e-44 / Id = 49.77 Expect = 6.84e-44 / Id = 49.09 Expect = 7.04e-44 / Id = 47.20 Expect = 1.20e-43 / Id = 52.91 Sequence Uncharacterized Uncharacterized Snf7-domain-containing Uncharacterized Uncharacterized Hypothetical Hypothetical Uncharacterized Hypothetical Hypothetical
Match Name E-value Identity Description
Uncharacterized 1.350e-124 99.52 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more] Uncharacterized 3.790e-80 97.22 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more] Snf7-domain-containing 3.550e-69 66.36 protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more] Uncharacterized 2.910e-47 52.15 protein n=1 Tax=Thraustotheca clavata TaxID=74557 ... [more] Uncharacterized 3.190e-47 52.38 protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more] Hypothetical 6.870e-45 48.34 protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more] Hypothetical 2.490e-44 49.77 protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more] Uncharacterized 6.840e-44 49.09 protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... [more] Hypothetical 7.040e-44 47.20 protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more] Hypothetical 1.200e-43 52.91 protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 317.4 Seed ortholog evalue 4.1e-84 Seed eggNOG ortholog 2880.D8LAT7 Preferred name CHMP4C Model size 1823 KEGG ko ko:K12194,ko:K16075,ko:K17085,ko:K19306 KEGG TC 1.A.35.5 KEGG Pathway ko04144,ko04217,map04144,map04217 KEGG Module M00412 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000281,GO:0000815,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000920,GO:0001894,GO:0001919,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006950,GO:0006996,GO:0006997,GO:0006998,GO:0007009,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008333,GO:0008356,GO:0008565,GO:0008593,GO:0009056,GO:0009057,GO:0009268,GO:0009405,GO:0009628,GO:0009653,GO:0009838,GO:0009892,GO:0009894,GO:0009895,GO:0009898,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010035,GO:0010038,GO:0010226,GO:0010256,GO:0010324,GO:0010389,GO:0010458,GO:0010467,GO:0010506,GO:0010507,GO:0010564,GO:0010639,GO:0010646,GO:0010648,GO:0010824,GO:0010941,GO:0010948,GO:0010972,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016241,GO:0016242,GO:0016322,GO:0016358,GO:0016485,GO:0017145,GO:0019058,GO:0019068,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030117,GO:0030154,GO:0030163,GO:0030182,GO:0030425,GO:0030447,GO:0030496,GO:0031090,GO:0031175,GO:0031224,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031468,GO:0031505,GO:0031967,GO:0031975,GO:0031982,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032886,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034059,GO:0034613,GO:0034622,GO:0035690,GO:0036176,GO:0036177,GO:0036178,GO:0036257,GO:0036258,GO:0036293,GO:0036294,GO:0036438,GO:0036452,GO:0036477,GO:0039702,GO:0040007,GO:0040008,GO:0040012,GO:0040017,GO:0042058,GO:0042059,GO:0042078,GO:0042221,GO:0042493,GO:0042551,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044088,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044878,GO:0045047,GO:0045169,GO:0045184,GO:0045229,GO:0045324,GO:0045746,GO:0045786,GO:0045926,GO:0045930,GO:0046605,GO:0046618,GO:0046755,GO:0046907,GO:0046983,GO:0048132,GO:0048285,GO:0048468,GO:0048469,GO:0048475,GO:0048477,GO:0048518,GO:0048519,GO:0048523,GO:0048524,GO:0048583,GO:0048585,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0048871,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051117,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051258,GO:0051259,GO:0051260,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051503,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0060236,GO:0060249,GO:0060255,GO:0060548,GO:0061024,GO:0061640,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070482,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0070938,GO:0070972,GO:0071214,GO:0071241,GO:0071248,GO:0071285,GO:0071453,GO:0071454,GO:0071467,GO:0071554,GO:0071555,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071944,GO:0071985,GO:0072594,GO:0072599,GO:0072657,GO:0072665,GO:0072666,GO:0080171,GO:0090148,GO:0090150,GO:0090169,GO:0090224,GO:0090543,GO:0090611,GO:0097320,GO:0097447,GO:0097458,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098722,GO:0098728,GO:0098796,GO:0098805,GO:0098813,GO:0104004,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140014,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901673,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902116,GO:1902186,GO:1902188,GO:1902749,GO:1902750,GO:1902902,GO:1903047,GO:1903900,GO:1903902,GO:1904669,GO:1990635,GO:2000785 Exons 3 EggNOG free text desc. vacuolar transport EggNOG OGs KOG1656@1,KOG1656@2759 Ec32 ortholog description Snf7 family Ec32 ortholog Ec-27_006420.1 EC 2.1.1.309 Cds size 516 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko04131,ko04147
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842622.5147896-UTR-E_fasciculatus_S2_contig9793:1044..1170 1696842622.5147896-UTR-E_fasciculatus_S2_contig9793:1044..1170 Ectocarpus fasciculatus EfasUO2 UTR E_fasciculatus_S2_contig9793 1045..1170 + 1696842622.5665243-UTR-E_fasciculatus_S2_contig9793:2737..3918 1696842622.5665243-UTR-E_fasciculatus_S2_contig9793:2737..3918 Ectocarpus fasciculatus EfasUO2 UTR E_fasciculatus_S2_contig9793 2738..3918 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842622.5294623-CDS-E_fasciculatus_S2_contig9793:1170..1227 1696842622.5294623-CDS-E_fasciculatus_S2_contig9793:1170..1227 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9793 1171..1227 + 1696842622.5447135-CDS-E_fasciculatus_S2_contig9793:1623..1779 1696842622.5447135-CDS-E_fasciculatus_S2_contig9793:1623..1779 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9793 1624..1779 + 1696842622.5559351-CDS-E_fasciculatus_S2_contig9793:2434..2737 1696842622.5559351-CDS-E_fasciculatus_S2_contig9793:2434..2737 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9793 2435..2737 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9793.17794.1
>prot_E_fasciculatus_S2_contig9793.17794.1 ID=prot_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=172bp
MYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRL back to top mRNA from alignment at E_fasciculatus_S2_contig9793:1045..3918+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9793.17794.1 ID=mRNA_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2874bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9793:1045..3918+ (Ectocarpus fasciculatus EfasUO2)TTGCGTACTCGACAACACAGGGAAAACCACATCCAGAAGAAGATCAAGGC
GCAACTGCTTGATGCCAAGGCGAAGAGCAGCGCAAAGGATAAGAGAGGGG
CCCTGTTCGCCCTCAAGAGAAAGAAG ATGTACGAAGGGGAGGTCAACAAG
CTCAACGGAGCCCGCATGACGCTGGAGAGCCAG GTGGGTTAGTGATGGTG
ATGGCAAGGCCAGGTTGAGCCTCGTGGGCGGAAGTGTACGCGTGCCTGTT
GCTGGTGATGGAGGAAAGCTGGCCTTGCGTTGCTCGAGCTTACTTCCGCC
AAGAGCTACAATTTTCGGGTTTTAAACTAGATTTGTATGTTTGTTTTCTG
ATTTGTGGCTAGCGAGAGGATCTCCCGGGCGATACTGACTGCACATTGGT
ACTAGGGCTGTGTTGTTGAAAGAGGAGATGATGCTTGCCAAGATAATCGA
AGCGATAGTGTATGTATGGACTACGGTGAGTTGTGAAACCCCCACCTCGT
GACTGCACTCCCTTCCCTCCCCCTCGGCTAACCGCCCTCCTCCGCGTGTG
ACACTATCCTATCCACCGCCCTGCGTCAGATCATCGCTCTAGAGGGGTCG
AACATGAACATGCAGACGTTCAACGCGATGCGGAGCGGTGCGAAGGCGAT
GCAGGACGCTAGGGGGCGTCTGGACGTTGACCAGGTGGACGATGTGATGG
ACGACATCAAGGACGAGATGGACATCGCGGAGCAG GTGTGTGGTTGTTGT
TGTTGCTGCTGCTGTTGTTGATGTGGTCGTGGCGATTACCACCAACGATA
CTCGAGGTTTGGTTGTGTTCCATGCGCCGCCTTTTTTTGCGGGGCGTCAA
ACAGATATCGACATCGTTTTTGTTTTTTTCGCGCACAAAACGAAGAGGAC
CGCCTCGAAACACCCGGCCAAGTCATTGAGAAGATTCTTCCAGCTGCACC
CTGTTGCAAAAGCTTGCCCTCGGGATGACCGTTGTCGTACCCACACCCCT
TCCCTGGCATTTAGTGAGCTGGGTTACTTGCACCTCCCTCCGTGTCTGGT
GTCAGAAAAAAAGTAACTCATCATCTGCAAACTGCTGATTGGTGTCGGAC
GCGGCAGGGCATTCGATAAGTTTTTTCCTTATGTACAGTAGCGCTGGTCT
AATTCAACAGCCTGTGGGGGCATCAATGACCAAACACGTCATCTATTCAA
CCGTATCAATTCAACCGTTTCAACATCCCCACCCAAAAGCCATCTATCAA
ACCCGGCGTCATGTTCGGAACGTTTTCCCGATGTGTGCAAAGTCCCGGTC
TATTTCGCTTCAGCAGCCCGTGGCGGCATCACCAGCCATATATATCACCA
ATTCATTCAACCACCAATCGTCCTCCACAAAATCGATCAGATCGGAGACG
CGATCGCGAGGCCGGCGGACGACCTCTTCGATGACGACGCCCTCCTCGAG
GAGTTAGACATGCTCGAGGAGGCCGACCTTGAGGAGCAGCTCCTCGCACC
CCCCGCCGTGCCGACGGCTCGGCCTGCGGCGCCCCAGGGAGTCGAGCAGC
CCGCGGTGGCCGAGTCCAAGGTACCCGAAGGGTACGACTTGCCATCGGTG
CCGTCGACAACGCCCGTCAGCGCGCCCGTAGCGGTGGAGGAAGACGAGGA
TGCTCGAGCACTGCGGGAGCTGGAGGCCAGCATGGCGATGTGA TCTTGAT
TGGGCGGCAGGGGGGGGGGGGTGCAGTCGGCGAAGCATGTAGACATGACG
CAGGTGGTGGATGGATACGGGGAGGAGGCGTGTTGGTGTTTATGTCTTGT
GTCGCCCTCTTCGGTGTAGGGGCGGAGCTGGGACGACTTGCACTCTCCGT
CCTTGTCTCGGTTGGCCTTCGTTTCTTGTGCTCCCCGCCGGTTTTGACGG
CAAGTCGGCGGGGTCGGTTGTTTCTAGTATGATACGGCCGGGCACCACAA
GCGGGGGTAATGTAAATGGGATGTGGGGTTGGGTCGCAACACGGACTACC
TTGGCTTTGTGTTGCCTGCCCCGTACCCGAAATGCCTGTTTGACCTACGC
TGCTCCCTCTTCCCTGTTGCTCTTGCGTCTGTGCCGTGTGGCTAACTAAG
CTCGGGTACACGTGTACGGTAGGCAGCCCGGCTCGCGAAGCGTCATGTCA
TGCTGTTTGGTAGTGGGAGAGGCGTGGTCCTGATGGTCGTGTCGAGAGGT
GTCATGGGGACAGGCAATGCGACAGCTGAAGTTTTGAACACGGCTAGTCG
GCACTGGGCCTCGTTGTGGAATCCATGATCCCGCGAGCAAAGCGTGTCAC
GACTGTAGTAGAAACCTTCACATAGTTAAATCTTAAATCTGAACGGACTG
TTATTTGTATTGTGTATTTTCCGGAAGGCGGCGGGGCAACCGATGAGTGC
GGTGGAATCAGCGGGAACTCACCGGTGTCTGTCCCGACATGTACACGTGA
CAGTAACAGCTGCATACATGAGCTCGGAGCAGCAGCAGCAGCACGTTTTA
TTGTTTGCTATGCGGGTAAATCTGTAAGCTACGTCTATTGTCTTTCTCCC
GTTCGACGGCACATCGAGGAGGGGGGTTGAAATTTGATTTGAACGTTGCA
TGTTGGTTGGCTGCCAAATTTATGGCATGGTGTTGGTTTGTCCTCGCGGG
TAGAGATTCTCGCCCGAAAAAACGCACTTGCCGGCTACAATAAATAGCTT
GCCTTGACGGCACCAAAACACGTATCGTTTCGGTCCCATTCTACAACTTC
CCGGGGTAATCAGTTTTTCGGCTGGTCGTCAACAACGACATCGAATACAA
ACCCAATCGGTCAGATGGGAGGGTTCTCAGTGTCCAAGTTTGAAGCTGAA
GGCACAACGTACCATGCCATTATT back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9793:1045..3918+
>mRNA_E_fasciculatus_S2_contig9793.17794.1 ID=mRNA_E_fasciculatus_S2_contig9793.17794.1|Name=mRNA_E_fasciculatus_S2_contig9793.17794.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=516bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9793:1045..3918+ (Ectocarpus fasciculatus EfasUO2) back to top