mRNA_E_fasciculatus_S2_contig979.17789.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig979.17789.1
Unique NamemRNA_E_fasciculatus_S2_contig979.17789.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE)

HSP 1 Score: 1164 bits (3010), Expect = 0.000e+0
Identity = 667/801 (83.27%), Postives = 686/801 (85.64%), Query Frame = 1
Query:   58 DLSLLAGSLSLTSGAWSSIKRTGACACCAARLVACRDPAVYACDERDLRAQLDARFCATNGDXXXXXXXXXXXAAVTSAVGERCCPLCLGLLQHEVPVRIAARPRPSSEVHGDHNRSCEQASLPTPGAGAGNKPAAEEIAPPPVLAEKTEAPGSTTAMAIDRCERQAPDGTATAAAAPDNSNGSSSSGTCRSTGYSRSRMVEAIVECITTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDPSPEPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGQTSRQAVVPVKEALKIGLAHALKGHLQTRQDEAAAXXXXXXXXXXXXXQDSDLMVEVTAKAPEADAHAATALLGGPASSRSGAGKPPRGWPTGGGRWAKKRQRREEHRNPGLTVSAVKKGLNEMDEAGRERMRRWVQGLAIEEGSTGGGIEEEPAATLGGATGAGDSCSGGCASEVVGGGDGAVVAEPKDSTGQAVDGVTPVSGTGAGDDVKGGSPAATTAEAPVVRAAGSPAPSATTSDASTPPPTSDGVEALCEVTIRRKSIHFWGRYTKLSRSVPQTPWIKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVEDRWSAAE 2460
            D SLLAGSLSLTSGAWS+IKRTGACACCAARLVACRDPAVYACDER LRAQLDARF +TN             AAVTS   ERCCPLCLGLLQHEVP+RIAARPRPSSEVHGDHNRSCEQASLP P A   +   ++EIAPPPV AEKTEAPGSTTAMAIDRCERQA D TATA AAP NSNGSS+S TCR+TGY RSRM EAIVECIT RGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCD SPEPS   XXXXXXXXXXXXXXXXX                   RAGQ SRQAVVPVKEALKIGLA  L+ HLQTRQ+ AAA XXXXX       QDSD MVEVTA+APEADAHAATALLGGPA S SGAGKPPRGWP GGGRWAKKRQRREE RNPGLTV AVKKGLNEMD+AGRERMRRWVQGL I+E  TGG IEE P A+LGG TGA DS SGG A+EVV GGDG V AEPKDSTGQAVDGVTPVSGT  G D + GSPAA  AEAPVVRAAG P PSAT SDAS  P TS G EALCEV IRRKSIHFWGRYTKLSRSVPQTPW KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDV+VRMLGKGRPFCLELVDSLRSV+EIAA LPSLADAVN AGGVKN GGGVAVSRLR+AGPGE PSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKAL EDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMR EWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLL CRADILQLDVTNVEDRWSAAE
Sbjct:   19 DPSLLAGSLSLTSGAWSAIKRTGACACCAARLVACRDPAVYACDERALRAQLDARFRSTNA-------ANEGSAAVTSTARERCCPLCLGLLQHEVPIRIAARPRPSSEVHGDHNRSCEQASLPMPPAAGASDTQSQEIAPPPVFAEKTEAPGSTTAMAIDRCERQALDETATAVAAPGNSNGSSTSDTCRNTGYCRSRMAEAIVECITARGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPEPSHQQXXXXXXXXXXXXXXXXXAAPT---------------RAGQISRQAVVPVKEALKIGLARTLRAHLQTRQEAAAAVXXXXXAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSHSGAGKPPRGWPAGGGRWAKKRQRREEQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGL-IQERRTGGEIEEVPVASLGGITGAADSSSGGRAAEVVRGGDGVVDAEPKDSTGQAVDGVTPVSGTVVGGDAREGSPAAAPAEAPVVRAAGVPPPSATPSDASIHP-TSGGAEALCEVAIRRKSIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVEDRWSAAE 795          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI)

HSP 1 Score: 876 bits (2264), Expect = 1.520e-312
Identity = 506/607 (83.36%), Postives = 520/607 (85.67%), Query Frame = 1
Query:  655 MVEAIVECITTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDPSPEPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGQTSRQAVVPVKEALKIGLAHALKGHLQTRQDEAAAXXXXXXXXXXXXXQDSDLMVEVTAKAPEADAHAATALLGGPASSRSGAGKPPRGWPTGGGRWAKKRQRREEHRNPGLTVSAVKKGLNEMDEAGRERMRRWVQGLAIEEGSTGGGIEE----EPAATLGGATGAGDSCSGGCASEVVGGGDGAVVAEPKDSTGQAVDGVTPVSGTGAGDDVKGGSPAATTAEAPVVRAAGSPAPSATTSDASTPPPTSDGVEALCEVTIRRKSIHFWGRYTKLSRSVPQTPWIKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVEDRWSAAED 2463
            M EAIVEC+TTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCD SP+PS  XXXXXXXXXXXXXXXXXXX                  RAGQ SRQAVVPVKEALKIGLAH LK HLQTRQ+EAAA             QDSD MVEVTA+APEADAHAATALLGGPA SRSGAGKPPRGWP GGGRWAKKRQRRE+ RNPGLTV AVKKGLNEMD+AGRERMRRWVQGL IEE  TGGGIEE    EP A++GGAT A           VVGGGDG V AEPKDSTGQAVDGVTPVSGT AG D + GSPAA  AEAPVVRAAG P PSAT SDAST P TS G EALCEV IRRK IHFWGRYTKLSRSVPQTPW KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDV+VRMLGKGRPFCLELVDSLRSV+EIAA LPSLADAVN AGGVKNAGGGVAVSRL+++GPGE PSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKAL EDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMR EWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLL CRADILQLDVTNVEDRWSAAED
Sbjct:    1 MAEAIVECVTTRGYTVTSFGVTAAVPACLAVRNAAFLEAGLGGCDLSPKPSHQXXXXXXXXXXXXXXXXXXXAPT---------------RAGQISRQAVVPVKEALKIGLAHVLKAHLQTRQEEAAAVAAVTAAVVTVDHQDSDFMVEVTARAPEADAHAATALLGGPAPSRSGAGKPPRGWPAGGGRWAKKRQRREQQRNPGLTVGAVKKGLNEMDDAGRERMRRWVQGL-IEERRTGGGIEEGIEEEPVASIGGATRAXXXXXXXXXXXVVGGGDGVVDAEPKDSTGQAVDGVTPVSGTVAGGDAREGSPAAIPAEAPVVRAAGPPPPSATPSDASTHP-TSAGAEALCEVAIRRKPIHFWGRYTKLSRSVPQTPWFKGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVDVRMLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVEDRWSAAED 590          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.170e-69
Identity = 138/262 (52.67%), Postives = 174/262 (66.41%), Query Frame = 1
Query: 1696 CEVTIRRKSIHFWGRYTKLSRSVPQTPWIKGF---------YSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAP-EELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVEDRWS 2451
            C   + R+  + +GRY KLSRSVPQ+PW  G           SVQE V+ P +A + C E  L GAGRED++VRMLG GRPF LE++DS  + +++A  LP L   VNA  G+ N+ G V VS  ++ G  +  S +Q   EGKRKHYRCVVW SR V + EL  AL    P  +L V+Q+TP+RVLHRR  L R +++  +R   +   FF L L TSAGTY+KEFVHGDLGRTVPS+G+LLGCRADILQLDV  V+DRWS
Sbjct:  417 CAAALERQPQYVFGRYRKLSRSVPQSPWTVGRGADAVRIGDASVQEIVAAPLEALARCREVKLAGAGREDMDVRMLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGL-NSEGAVEVSDFKLVGR-DIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSAGTYVKEFVHGDLGRTVPSVGALLGCRADILQLDVVGVDDRWS 676          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2V0_DIALT)

HSP 1 Score: 201 bits (511), Expect = 1.030e-52
Identity = 119/259 (45.95%), Postives = 154/259 (59.46%), Query Frame = 1
Query: 1696 CEVTIRRKS--IHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDS--LRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGK-RKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVED 2442
            C  ++R     +   GRY K SR +PQTPW      +G  SVQE +    Q        + HGAGREDV+VRMLG GRPF +E+ +   L     +   L  L  A+N A         V VS+LR+  P     D+   GE + RK YRCVVW+SR V   E+   L  D   E++++Q TPIRVLHRR LL RPR+++ MR E +N H+  L+L T +GTY+KEFVHGD GRT P++GSLLGC ADILQLDV ++ D
Sbjct:  241 CSASLRASHAPVCIGGRYNKYSREMPQTPWWLDNEKRGISSVQEELQTVLQPAYAASATVFHGAGREDVDVRMLGSGRPFVIEMQEPACLEPGTAVGTPLAELEAAINLASEH------VQVSQLRVV-PSSSIGDLVREGESEHRKAYRCVVWLSRRVSAREVADKL--DGAGEVLLEQRTPIRVLHRRPLLTRPRTVYSMRSELLNGHYLMLDLVTQSGTYVKEFVHGDFGRTHPNVGSLLGCSADILQLDVLSILD 490          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ29_CAPO3)

HSP 1 Score: 201 bits (512), Expect = 1.150e-51
Identity = 127/259 (49.03%), Postives = 163/259 (62.93%), Query Frame = 1
Query: 1714 RKSIHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRS--VEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEG---KRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLG-CRADILQLDVTNVEDRWSAA 2457
            R  I   GRY K SR V Q+P+I     KG  SV E ++ P  A+ G  E  L  +GRED++VRMLG+GRPF LE+ D+ RS    +  A L +L   VN A     AGG V +  L +A      +D+ A+ EG   K+K Y  V+WVSRP+  E++  AL+   PEE+VVQQ TP+RV+HRR +  RPRS++ MR   INEH+  L L+T AGTYIKEF HGD GRT PSIGSLLG C ADI+QLDV +++  W  A
Sbjct:  392 RDPIFIGGRYNKYSRVVSQSPYIVGEERKGDTSVHELIAAPMLAYCGASEIKLSSSGREDMDVRMLGRGRPFVLEIADARRSSLTPDKLAHLQAL---VNDA-----AGGRVHIRDLIVA----QRADIPALNEGEDDKKKLYGAVIWVSRPITAEDIA-ALTR--PEEMVVQQMTPLRVMHRRAICTRPRSVYWMRAHQINEHYLLLCLSTQAGTYIKEFAHGDFGRTAPSIGSLLGNCEADIVQLDVLDIDMPWPPA 635          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYU0_CAFRO)

HSP 1 Score: 193 bits (490), Expect = 2.870e-51
Identity = 124/256 (48.44%), Postives = 156/256 (60.94%), Query Frame = 1
Query: 1702 VTIRRKSIHFWGRYTKLSRSVPQTPWI----KGFY-SVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDS-LRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEG---KRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCR--ADILQLDVTNV 2436
            V +RR+S+   GRY+K +R V QT W     +G Y SV+E  ++      G  +  LHG+GREDV+VRMLG GRPF LEL    + SV +  A +   A  +N       +  GV V+ LR+A      SDV AV  G   KRK Y  +V     V  E L + L  DA +EL V Q TP+RVLHRR+L+DRP+ I GMR  W+N H+F L L TSAG Y+KEFVHGDLGRT P++G+LLG    ADILQLDV NV
Sbjct:   67 VAVRRESLFVRGRYSKTARGVSQTAWRLEGQEGLYRSVEEVAADHLAPLFGAADSRLHGSGREDVDVRMLGGGRPFVLELKQPRISSVSQ--AAIDQAAMRIN------RSPEGVTVTELRLA----TTSDVDAVTAGAGDKRKEYAALVRCRAAVTPEFLRERL--DAVKELAVCQTTPVRVLHRRSLMDRPKVIHGMRTRWVNAHWFVLRLVTSAGAYVKEFVHGDLGRTQPNVGALLGDEGGADILQLDVLNV 308          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHV3_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.310e-50
Identity = 111/252 (44.05%), Postives = 151/252 (59.92%), Query Frame = 1
Query: 1702 VTIRRKSIHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVED 2442
            VT+ R  ++  GRY K  R + Q+PW+      G  SV+EA+ +    +        H AGREDV+VRMLG GRPF LE++D+ +     AA    + D VNAA        G+   R   A   E+ + +QA  + K+K Y CVVW    +  E + K    DA ++L +QQ TP+RVLHRRTL+ RP+ I   + E +N+H+  L L TSAGTY+KEFVHGD GRT+P++ S+LGC ADILQLDV N+ D
Sbjct:  239 VTLERDPVYLQGRYLKFKRGLSQSPWVLEGVRMGESSVEEAIGDIALPYFRGASYKFHTAGREDVDVRMLGNGRPFILEVIDA-KKANLTAAEYKEVEDVVNAANV------GIVEIRHTKASTKEYFAGLQAGADSKKKTYCCVVWSEAELTPEAVAKL---DAIQDLTIQQETPVRVLHRRTLMTRPKVIHSAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTLPNVSSILGCDADILQLDVENLLD 480          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQC3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 4.590e-50
Identity = 113/254 (44.49%), Postives = 149/254 (58.66%), Query Frame = 1
Query: 1714 RKSIHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNV--EDRWSA 2454
            R+ +   GRY KL+R VPQ+PW      KG  SV+E +    QA  G  E     AGRED++VRMLG GRPF +E++   R     A  +  +  ++N+     N    V V  L+   P     ++      K+K YRC+VWVS+PV  ++L   L  D+  +L V Q TPIRV+HRR+ + R + I  +R  WIN H+FQL++  SAGTYIKEFVHGDLGRT P +G LL C ADI+QLDV  V  E R SA
Sbjct:   65 RQPLFLGGRYRKLARDVPQSPWFIDGQRKGRGSVEECLGHAIQAAFGADEVKFQAAGREDIDVRMLGHGRPFLVEVLQPRRLTALSA--VDQIMRSINSDMTGPNKDQDVEVEALQWV-PRSVEKEMHDGAADKKKGYRCMVWVSKPVTPQDLEARL--DSVADLKVAQDTPIRVVHRRSPMIRDKMIHSLRTSWINSHWFQLDVVASAGTYIKEFVHGDLGRTRPCVGDLLSCEADIVQLDVVEVFMEGRLSA 313          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1C6_GLOUD)

HSP 1 Score: 191 bits (486), Expect = 2.330e-49
Identity = 116/267 (43.45%), Postives = 156/267 (58.43%), Query Frame = 1
Query: 1666 PPTSDGVEALCEVTIRRKSIHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRS---VEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNVED 2442
            PPT    +   E+ I R  ++  GRY K  R + Q+PW+      G  SV+E + +    +        H AGREDV+VRMLG GRPF LE++D+ ++    EE       + DAVNAA   +NA       R   A   E+ + +QA  + K+K Y CVVW  R +  E + K    DA  +L +QQ TPIRVLHRRTL+ RP+ I   + E +N+H+  L L TSAGTY+KEFVHGD GRT+P++ S+LG  ADILQLDV N+ D
Sbjct:  229 PPTLLQTQPTAELVIERDPVYLQGRYLKFKRGLSQSPWVLDGVRMGESSVEECIGDIALPYFRGASYKFHTAGREDVDVRMLGNGRPFILEIIDAKKANLTQEEY----QQIQDAVNAAN--ENA----VEIRETKASTKEYFAGLQAGADSKKKTYCCVVWSERELTAEAVAKL---DAIHDLAIQQETPIRVLHRRTLMTRPKVIHEAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTLPNVSSILGSNADILQLDVENLLD 482          
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Match: tRNA (pseudouridine(55) synthase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S979_BLAHN)

HSP 1 Score: 192 bits (489), Expect = 2.480e-49
Identity = 119/262 (45.42%), Postives = 155/262 (59.16%), Query Frame = 1
Query: 1666 PPTSDGVEALCEVTIRRKSIHFWGRYTKLSRSVPQTPWI-----KGFYSVQEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVEEIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGCRADILQLDVTNV 2436
            PPTS   E    +++ RK + F G Y K+ R + QTPWI     K   SV+E + + F+          H AGREDV+VRMLG GRPF +EL ++++  +  A  L  L DA+N   G  N    + V  LR   P  F  +++   EGK K Y  VV+   PV   EL K    +A ++L +QQ TP+RVLHRRTLL R ++IFGM+ +++N H F LE+  S G YIKEFVHGDLGRT PSIG +LG   DILQLDV  V
Sbjct:  278 PPTSPTFEPTIGLSVYRKPVFFTGNYRKMKRGLSQTPWIVDGKRKTEGSVEEYILDVFKNRLEARTYKFHSAGREDVDVRMLGDGRPFIIEL-ENVKRCDLTAEELKELEDAIN---GSTNE---MEVHYLRRCSPNGF-EELKKAAEGKHKLYVAVVFCENPVTPAELTKL---EAIKDLTIQQKTPVRVLHRRTLLTREKTIFGMKTQYVNPHHFILEIEASGGAYIKEFVHGDLGRTRPSIGEILGNDCDILQLDVKAV 528          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig979.17789.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
tRNA0.000e+083.27pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. ... [more]
tRNA1.520e-31283.36pseudouridine(55) synthase n=1 Tax=Ectocarpus sili... [more]
tRNA4.170e-6952.67pseudouridine(55) synthase n=1 Tax=Tribonema minus... [more]
tRNA1.030e-5245.95pseudouridine(55) synthase n=1 Tax=Diacronema luth... [more]
tRNA1.150e-5149.03pseudouridine(55) synthase n=2 Tax=Capsaspora owcz... [more]
tRNA2.870e-5148.44pseudouridine(55) synthase n=3 Tax=Cafeteria roenb... [more]
tRNA1.310e-5044.05pseudouridine(55) synthase n=1 Tax=Pythium brassic... [more]
tRNA4.590e-5044.49pseudouridine(55) synthase n=1 Tax=Rhizochromulina... [more]
tRNA2.330e-4943.45pseudouridine(55) synthase n=1 Tax=Globisporangium... [more]
tRNA2.480e-4945.42pseudouridine(55) synthase n=1 Tax=Blastocystis sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig979contigE_fasciculatus_S2_contig979:5876..8950 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score889.0
Seed ortholog evalue1.6e-255
Seed eggNOG ortholog2880.D8LRA8
Model size2472
KEGG koko:K07583
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG1258@1,KOG2364@2759
Ec32 ortholog descriptionPseudouridine synthase, catalytic domain
Ec32 orthologEc-06_003220.1
EC5.4.99.25
Cds size2472
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842621.9922032-CDS-E_fasciculatus_S2_contig979:5875..60211696842621.9922032-CDS-E_fasciculatus_S2_contig979:5875..6021Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig979 5876..6021 -
1696842622.0052648-CDS-E_fasciculatus_S2_contig979:6624..89501696842622.0052648-CDS-E_fasciculatus_S2_contig979:6624..8950Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig979 6625..8950 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig979.17789.1prot_E_fasciculatus_S2_contig979.17789.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig979 5876..8950 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig979.17789.1

>prot_E_fasciculatus_S2_contig979.17789.1 ID=prot_E_fasciculatus_S2_contig979.17789.1|Name=mRNA_E_fasciculatus_S2_contig979.17789.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=824bp
MAAQQQQQAATATSTPAPADLSLLAGSLSLTSGAWSSIKRTGACACCAAR
LVACRDPAVYACDERDLRAQLDARFCATNGDGDGDGDGDGDGAAVTSAVG
ERCCPLCLGLLQHEVPVRIAARPRPSSEVHGDHNRSCEQASLPTPGAGAG
NKPAAEEIAPPPVLAEKTEAPGSTTAMAIDRCERQAPDGTATAAAAPDNS
NGSSSSGTCRSTGYSRSRMVEAIVECITTRGYTVTSFGVTAAVPACLAVR
NAAFLEAGLGGCDPSPEPSQQQQQQQQQQQQQQQQQQQSSPGEPQPPAAA
TPPAAPPPRAGQTSRQAVVPVKEALKIGLAHALKGHLQTRQDEAAAVAAA
AAAVVTVDDQDSDLMVEVTAKAPEADAHAATALLGGPASSRSGAGKPPRG
WPTGGGRWAKKRQRREEHRNPGLTVSAVKKGLNEMDEAGRERMRRWVQGL
AIEEGSTGGGIEEEPAATLGGATGAGDSCSGGCASEVVGGGDGAVVAEPK
DSTGQAVDGVTPVSGTGAGDDVKGGSPAATTAEAPVVRAAGSPAPSATTS
DASTPPPTSDGVEALCEVTIRRKSIHFWGRYTKLSRSVPQTPWIKGFYSV
QEAVSEPFQAFSGCVEGLLHGAGREDVNVRMLGKGRPFCLELVDSLRSVE
EIAACLPSLADAVNAAGGVKNAGGGVAVSRLRMAGPGEFPSDVQAVGEGK
RKHYRCVVWVSRPVGKEELVKALSEDAPEELVVQQATPIRVLHRRTLLDR
PRSIFGMRPEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLGC
RADILQLDVTNVEDRWSAAEDDC*
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mRNA from alignment at E_fasciculatus_S2_contig979:5876..8950-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig979.17789.1 ID=mRNA_E_fasciculatus_S2_contig979.17789.1|Name=mRNA_E_fasciculatus_S2_contig979.17789.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3075bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig979:5876..8950- (Ectocarpus fasciculatus EfasUO2)
ATGGCCGCACAACAGCAACAGCAGGCGGCTACTGCAACTTCCACCCCGGC ACCAGCAGACCTCTCCCTCCTGGCCGGTTCTCTCTCCCTGACCTCAGGGG CATGGTCGTCCATCAAGCGAACCGGAGCTTGTGCCTGCTGCGCCGCTCGC CTAGTCGCGTGCCGAGACCCCGCGGTGTACGCGTGCGACGAGCGGGACTT GAGAGCGCAGCTCGACGCTCGCTTTTGCGCAACCAACGGCGACGGCGACG GCGACGGCGACGGCGACGGCGACGGCGCTGCTGTGACCAGCGCGGTGGGA GAGAGGTGCTGCCCTCTTTGCCTGGGGTTGCTGCAGCACGAGGTGCCTGT CCGCATTGCTGCCCGCCCTAGGCCTTCCTCCGAGGTTCACGGGGACCACA ATCGATCCTGCGAACAGGCGTCGCTACCGACACCTGGAGCTGGTGCTGGG AACAAACCGGCGGCGGAAGAGATTGCGCCGCCGCCCGTCCTTGCCGAGAA AACCGAGGCGCCCGGATCAACCACGGCTATGGCGATCGACCGTTGCGAGC GTCAGGCGCCCGATGGAACGGCCACCGCAGCGGCCGCTCCAGACAACAGC AACGGCAGCAGTAGCAGCGGTACCTGCAGAAGCACGGGTTACAGTCGCTC GCGAATGGTGGAGGCGATCGTGGAATGCATCACCACCCGAGGGTATACCG TCACAAGCTTCGGGGTGACGGCGGCGGTGCCAGCGTGCCTGGCGGTGCGG AACGCGGCGTTTCTGGAGGCGGGTTTGGGCGGCTGCGACCCCTCACCCGA GCCTTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGTCCTCTCCGGGTGAACCCCAGCCGCCCGCCGCCGCC ACTCCGCCCGCAGCGCCGCCGCCGAGGGCTGGTCAAACCTCTCGGCAGGC CGTCGTGCCCGTCAAGGAGGCGCTCAAGATCGGGCTGGCTCACGCGCTCA AGGGCCACCTCCAAACCAGACAGGACGAGGCGGCGGCGGTGGCAGCGGCG GCGGCGGCAGTAGTGACGGTCGACGACCAGGACTCTGACTTGATGGTGGA GGTGACCGCCAAGGCCCCGGAAGCCGACGCGCACGCGGCGACCGCGCTCC TGGGCGGCCCGGCTTCGTCCCGCTCGGGCGCCGGCAAGCCTCCGCGCGGC TGGCCCACGGGGGGAGGGAGGTGGGCGAAGAAGCGCCAGCGGCGGGAGGA GCATCGTAACCCGGGGCTGACCGTCAGCGCGGTTAAGAAGGGCCTCAACG AGATGGACGAGGCGGGCAGGGAGCGCATGAGGCGCTGGGTGCAGGGGCTA GCAATAGAAGAGGGGAGTACTGGCGGGGGAATAGAGGAAGAACCAGCGGC CACCCTTGGCGGAGCAACCGGAGCAGGAGACAGCTGTAGCGGGGGGTGCG CGTCTGAAGTTGTCGGTGGTGGAGATGGCGCCGTCGTTGCCGAGCCGAAA GACTCTACAGGCCAGGCGGTGGACGGCGTGACCCCCGTGAGCGGGACTGG AGCGGGTGATGATGTGAAGGGGGGATCACCCGCCGCGACAACTGCGGAGG CGCCGGTGGTGCGAGCGGCGGGATCGCCAGCACCCTCCGCCACAACAAGC GACGCCAGCACCCCCCCCCCGACCAGCGACGGCGTGGAGGCGCTCTGCGA GGTCACCATCCGGCGGAAGTCGATCCACTTCTGGGGCCGGTACACCAAGC TCTCCCGGAGCGTCCCGCAGACGCCGTGGATCAAGGGTTTCTACTCCGTG CAGGAGGCGGTCTCCGAACCGTTCCAGGCGTTCTCCGGGTGCGTGGAAGG GCTCCTGCACGGGGCCGGCCGGGAGGACGTCAACGTCCGGATGCTGGGAA AGGGCCGCCCGTTCTGCCTGGAGCTGGTGGACTCCCTCCGGTCCGTTGAG GAGATCGCGGCGTGCTTGCCGTCCCTTGCCGACGCGGTCAACGCCGCCGG GGGCGTCAAGAACGCCGGCGGCGGCGTCGCCGTGTCCAGGCTCCGGATGG CCGGCCCCGGGGAGTTCCCGAGCGACGTCCAGGCGGTCGGTGAGGGGAAG CGGAAGCACTACCGGTGCGTGGTGTGGGTGTCCAGGCCGGTGGGGAAGGA GGAGCTCGTGAAGGCGCTGTCCGAGGATGCGCCGGAGGAGCTGGTGGTGC AGCAGGCCACGCCCATCCGCGTGCTGCACCGCAGGACGCTGCTCGACAGG CCTAGGTCGATCTTCGGCATGCGCCCGGAGTGGATCAACGAGCACTTTTT CCAGCTGGAGCTCGCCACGTCCGCCGGTGAGAAGAGCCAGACAGGTTTTT TAGTGGAGAGTTGGCGCGTTTTTTTTTGTTGTCCCATGGCGCGTCGCTGT TCGCTTGACTCGTCTGCCGTTAATTTTTTCCCGTTTCCTTTGCGGGTCAT CACTCTCGTTGCTGTTGTTAGTGTCAAGACTCTTTGCGATCTTTATCGAA CGTGTGCTTTTCGTGTGCTGTGTTGTGGGTGAAAACAAACTGATTATGTA CACCCTTGCAGTTGGTAGGTCTACAAGAGCTCAAGGTACCACGTGGTACC CTTGATTAACACTGCCCACTAACAGGACCCGGACTGTTTGACATACACAG CCCGCGTTCTTGTCATTCAGTACAGAATGACAATGGTCCACCACATTACA ACGTCTTAACTGCGGCTTACTTCCTTTGGGGCAAGCAACCATCAGCCGGT GTATTGGGGCTTCGCGACAGGATTGTTCGTCGGACGGGACAGGTTGTACA ATTGAAACCGAAAGAGACTGGAGCCCCAGTTTGTTCACTGCCTAGCTCTC GAGAGGTGGCAAGTTCTGCAACTTCTTTCCTGTCTCACCCCCCTCCCCCC CCGTCTCTATTCTTGTTTCCCCCCAAAAGGTACGTACATCAAGGAGTTCG TGCACGGGGATCTCGGGCGAACGGTCCCCTCAATTGGAAGCCTCCTCGGC TGCCGGGCGGACATCCTGCAGCTTGACGTTACGAACGTCGAAGACAGATG GAGCGCAGCGGAGGATGACTGCTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig979:5876..8950-

>mRNA_E_fasciculatus_S2_contig979.17789.1 ID=mRNA_E_fasciculatus_S2_contig979.17789.1|Name=mRNA_E_fasciculatus_S2_contig979.17789.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2472bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig979:5876..8950- (Ectocarpus fasciculatus EfasUO2)
ATGGCCGCACAACAGCAACAGCAGGCGGCTACTGCAACTTCCACCCCGGC
ACCAGCAGACCTCTCCCTCCTGGCCGGTTCTCTCTCCCTGACCTCAGGGG
CATGGTCGTCCATCAAGCGAACCGGAGCTTGTGCCTGCTGCGCCGCTCGC
CTAGTCGCGTGCCGAGACCCCGCGGTGTACGCGTGCGACGAGCGGGACTT
GAGAGCGCAGCTCGACGCTCGCTTTTGCGCAACCAACGGCGACGGCGACG
GCGACGGCGACGGCGACGGCGACGGCGCTGCTGTGACCAGCGCGGTGGGA
GAGAGGTGCTGCCCTCTTTGCCTGGGGTTGCTGCAGCACGAGGTGCCTGT
CCGCATTGCTGCCCGCCCTAGGCCTTCCTCCGAGGTTCACGGGGACCACA
ATCGATCCTGCGAACAGGCGTCGCTACCGACACCTGGAGCTGGTGCTGGG
AACAAACCGGCGGCGGAAGAGATTGCGCCGCCGCCCGTCCTTGCCGAGAA
AACCGAGGCGCCCGGATCAACCACGGCTATGGCGATCGACCGTTGCGAGC
GTCAGGCGCCCGATGGAACGGCCACCGCAGCGGCCGCTCCAGACAACAGC
AACGGCAGCAGTAGCAGCGGTACCTGCAGAAGCACGGGTTACAGTCGCTC
GCGAATGGTGGAGGCGATCGTGGAATGCATCACCACCCGAGGGTATACCG
TCACAAGCTTCGGGGTGACGGCGGCGGTGCCAGCGTGCCTGGCGGTGCGG
AACGCGGCGTTTCTGGAGGCGGGTTTGGGCGGCTGCGACCCCTCACCCGA
GCCTTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTCCTCTCCGGGTGAACCCCAGCCGCCCGCCGCCGCC
ACTCCGCCCGCAGCGCCGCCGCCGAGGGCTGGTCAAACCTCTCGGCAGGC
CGTCGTGCCCGTCAAGGAGGCGCTCAAGATCGGGCTGGCTCACGCGCTCA
AGGGCCACCTCCAAACCAGACAGGACGAGGCGGCGGCGGTGGCAGCGGCG
GCGGCGGCAGTAGTGACGGTCGACGACCAGGACTCTGACTTGATGGTGGA
GGTGACCGCCAAGGCCCCGGAAGCCGACGCGCACGCGGCGACCGCGCTCC
TGGGCGGCCCGGCTTCGTCCCGCTCGGGCGCCGGCAAGCCTCCGCGCGGC
TGGCCCACGGGGGGAGGGAGGTGGGCGAAGAAGCGCCAGCGGCGGGAGGA
GCATCGTAACCCGGGGCTGACCGTCAGCGCGGTTAAGAAGGGCCTCAACG
AGATGGACGAGGCGGGCAGGGAGCGCATGAGGCGCTGGGTGCAGGGGCTA
GCAATAGAAGAGGGGAGTACTGGCGGGGGAATAGAGGAAGAACCAGCGGC
CACCCTTGGCGGAGCAACCGGAGCAGGAGACAGCTGTAGCGGGGGGTGCG
CGTCTGAAGTTGTCGGTGGTGGAGATGGCGCCGTCGTTGCCGAGCCGAAA
GACTCTACAGGCCAGGCGGTGGACGGCGTGACCCCCGTGAGCGGGACTGG
AGCGGGTGATGATGTGAAGGGGGGATCACCCGCCGCGACAACTGCGGAGG
CGCCGGTGGTGCGAGCGGCGGGATCGCCAGCACCCTCCGCCACAACAAGC
GACGCCAGCACCCCCCCCCCGACCAGCGACGGCGTGGAGGCGCTCTGCGA
GGTCACCATCCGGCGGAAGTCGATCCACTTCTGGGGCCGGTACACCAAGC
TCTCCCGGAGCGTCCCGCAGACGCCGTGGATCAAGGGTTTCTACTCCGTG
CAGGAGGCGGTCTCCGAACCGTTCCAGGCGTTCTCCGGGTGCGTGGAAGG
GCTCCTGCACGGGGCCGGCCGGGAGGACGTCAACGTCCGGATGCTGGGAA
AGGGCCGCCCGTTCTGCCTGGAGCTGGTGGACTCCCTCCGGTCCGTTGAG
GAGATCGCGGCGTGCTTGCCGTCCCTTGCCGACGCGGTCAACGCCGCCGG
GGGCGTCAAGAACGCCGGCGGCGGCGTCGCCGTGTCCAGGCTCCGGATGG
CCGGCCCCGGGGAGTTCCCGAGCGACGTCCAGGCGGTCGGTGAGGGGAAG
CGGAAGCACTACCGGTGCGTGGTGTGGGTGTCCAGGCCGGTGGGGAAGGA
GGAGCTCGTGAAGGCGCTGTCCGAGGATGCGCCGGAGGAGCTGGTGGTGC
AGCAGGCCACGCCCATCCGCGTGCTGCACCGCAGGACGCTGCTCGACAGG
CCTAGGTCGATCTTCGGCATGCGCCCGGAGTGGATCAACGAGCACTTTTT
CCAGCTGGAGCTCGCCACGTCCGCCGGTACGTACATCAAGGAGTTCGTGC
ACGGGGATCTCGGGCGAACGGTCCCCTCAATTGGAAGCCTCCTCGGCTGC
CGGGCGGACATCCTGCAGCTTGACGTTACGAACGTCGAAGACAGATGGAG
CGCAGCGGAGGATGACTGCTAG
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