mRNA_E_fasciculatus_S2_contig976.17755.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: POTRA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K699_9PHAE) HSP 1 Score: 237 bits (604), Expect = 2.070e-76 Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 2
Query: 2 VEGAQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTV 379
VEGAQ+LD MGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTA+GNLDASEFSNLRYS+AGALRNPLGHGEMLDVGYNSPIAGQEGHTVS KLYLP+LFRTPVSGTLEAIMDTV
Sbjct: 49 VEGAQRLDGMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAKGNLDASEFSNLRYSVAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSAKLYLPNLFRTPVSGTLEAIMDTV 174
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Sorting (and Assembly Machinery 50kDa protein (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C0_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.660e-72 Identity = 125/169 (73.96%), Postives = 135/169 (79.88%), Query Frame = 2
Query: 2 VEGAQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEH-----RRGVTATARTPDGRHALAAEMGLRDVS 493
VEGAQ+LD +GLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTA+GNLDASEFSNLRYS+AGALRNPLGHGEMLDVGYNSPI GQEGHTVS KL+LPHLFRTPVSGTLEAIMDTV ++ EH R ++ T + A L S
Sbjct: 49 VEGAQRLDGLGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAKGNLDASEFSNLRYSVAGALRNPLGHGEMLDVGYNSPIKGQEGHTVSAKLHLPHLFRTPVSGTLEAIMDTVVFEDENTRQEHWTLTVERHASSDVETRQAKRITAIRTALSTAS 217
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Sorting (and assembly machinery component 50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ9_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.280e-37 Identity = 86/215 (40.00%), Postives = 125/215 (58.14%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQAS 655
A L +G+F+ V V +D + GS ++ DV +TVKE+ +L +G + S+ S L S G L NP G+GE++ + +AG + + +L P + S L+A +T D + SS E RG+ AT R+ DG HAL EM RDV P RHP VPYA+AASL V+ E+ RPS ++S++Y +T+D RD P+VP +G Y+QAS
Sbjct: 55 AAALHGLGIFDRVDVMLDRAEGGSSNEADVCITVKERGIRVLHAG-----------NRSDTS-LEASTTGQLTNPFGNGEVISGSAGASLAGTTSYAL--RLVRPRVAGRDASLILQARQETHDQLRTSSFTELSRGLVATLRSHDGAHALTGEMTWRDVMPRRHPTVPYAHAASLSVLRES-RPSVRSSMRYAYTQDGRDSPYVPTVGPYLQAS 254
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Omp85 (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV81_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.960e-27 Identity = 77/220 (35.00%), Postives = 119/220 (54.09%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
A +L G+F+SV + ++ DG+ ++TDV +TVKE L +G ++G A+G +N + +L NPLGH E +++ G +G S + P P T A + +FSS E RG T + +G H LA +G RD+ P R+ +P YAAS +++EA PSTK+S+KYT+ +D+R+DP +P G ++AS E AG
Sbjct: 56 ALELRAFGIFDSVDILLEKTADGTRNETDVVITVKESRMLSLYAGVESSG-AEGT------ANTKCTLT----NPLGHAEKIELSAAHGQYGSDGQNFSYRR--PKFLGRPWWFTASAANEVQVHERFSSFREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAV-PSTKSSVKYTYNDDQRNDPTLPTSGRLLRASAEVAG 261
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Sorting (and assembly machinery component 50 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEL1_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.260e-27 Identity = 76/221 (34.39%), Postives = 115/221 (52.04%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLY-LPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
AQ+L + +FESV + +D G + DVT+TVKE L +G N D E + + L NPLGH E +++ S GQ G V Y P P+ +A+ + ++ +FSS E RG T + + RH L+ +G RD+ P R+ +P YAAS +++EA PSTK+S+KY + +D+R+D +P G ++ SLE AG
Sbjct: 52 AQELRNLNIFESVDILIDKAPGGDRHEADVTITVKELRMASLYAGV--------NSDGHEGTA---TTTCTLTNPLGHAERIEL---SASHGQYGSDVQKASYHKPKFLGLPLWLNADAVNEVINHERFSSYHERFRGGTVSLTDENNRHELSMNLGWRDIVPVRNKKIPSTYAASPSIMAEA-EPSTKSSVKYVYNDDQRNDAALPTAGRLLRTSLEVAG 257
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Aste57867_21946 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIX1_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.650e-27 Identity = 75/220 (34.09%), Postives = 116/220 (52.73%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
AQ+L G+F+S+ + MD GS +TDV +TVKE L +G + G +N + +L NPLG+ E +++G + G + S + P P T A+ + +FSS E RG T + +G H LA +G RD+ P R+ +P YAAS G+++EA PSTK+S+KYT+ +D+R++ +P G ++AS E AG
Sbjct: 55 AQELRSFGIFDSIDILMDKAQGGSRYETDVIITVKESRMMSLYAGVESEG-------VEGAANSKCTLT----NPLGNAEQIELGLSHGQYGSDSQNFSYRR--PKFLGFPAWLTANAVNEVQVFERFSSYREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPGIMAEAV-PSTKSSIKYTYNDDQRNNSTLPTTGRLLRASAEVAG 260
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: POTRA (domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSA8_SAPPC) HSP 1 Score: 116 bits (290), Expect = 1.060e-26 Identity = 71/220 (32.27%), Postives = 115/220 (52.27%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
A++L + +FESV + +D G+ ++ DVT+TVKE + +G N D E + + L NPLGH E +++ + G + T + P PV A+ + ++ +FSS E RG T + + RH LA +G RD+ P R+ +P YAAS +++EA PSTK+S+KY + +D+R+D +P G ++ S+E AG
Sbjct: 52 AEELRNLSIFESVDILIDTAPGGNRNEADVTITVKELGMASVYAGV--------NSDGHEGTA---NTTCTLTNPLGHAERIELSASHGQFGSD--TQKASYHKPKFLGLPVWLNANAVNEVLNHDRFSSYHERFRGGTVSLTDDESRHELALNLGWRDIVPVRNKKIPSTYAASPSIMAEA-EPSTKSSIKYVYNDDQRNDAALPTAGRLLRTSMEVAG 257
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Sorting (and assembly machinery component 50 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWW2_9STRA) HSP 1 Score: 114 bits (286), Expect = 3.680e-26 Identity = 75/221 (33.94%), Postives = 113/221 (51.13%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLY-LPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
A++L + +FESV V +D G + DVT+TVKE L +G +D+ + + L NPLGH E +++ S GQ G V Y P P+ A+ + + +FSS E RG T + + RH LA +G RD+ P R+ +P YAAS +++EA PSTK+S+KY + +D+R+D +P G ++ SLE AG
Sbjct: 52 AEELRNLNIFESVDVLIDKAAGGDRHEADVTITVKESRMMTLYAG----------VDSDGYEGTANTTC-TLTNPLGHAERIEL---SAAHGQYGSDVQKASYHKPKFLGLPLWLNANAVNEMQNHDRFSSYHEKFRGGTMSLTDDENRHELAFNLGWRDIVPIRNKKIPSTYAASPSIMAEA-EPSTKSSVKYVYNDDQRNDSALPTSGRLLRTSLEVAG 257
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: POTRA (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGW8_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.880e-25 Identity = 74/222 (33.33%), Postives = 117/222 (52.70%), Query Frame = 2
Query: 5 EGAQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
E A +L G+F+SV + +D DGS +TDVT+TVKE L +G G+++ + +N + +L NPLG+ E ++ ++G + + + P + A + +FSS E RG T + DG H LA +G RD+ P R+ +P YAAS +++EA PSTK+S+KYT+ +D+R+D +P G ++AS E AG
Sbjct: 51 EAAVELRSFGIFDSVDILLDKAVDGSRHETDVTITVKESRMVSLYAGV-----ESGDVEGA--ANTKCTLV----NPLGNAEQIEFSATHSLSGSDAQKFTYRK--PKFLGQALWFNANASNEVEVHERFSSYREKFRGGTVSVSDYDGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAV-PSTKSSIKYTYNDDQRNDSTLPTAGRLLRASTEVAG 258
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Match: Omp85 (domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXL9_9STRA) HSP 1 Score: 111 bits (278), Expect = 5.080e-25 Identity = 76/220 (34.55%), Postives = 116/220 (52.73%), Query Frame = 2
Query: 11 AQKLDEMGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLDASEFSNLRYSLAGALRNPLGHGEMLDVGYNSPIAGQEGHTVSGKLYLPHLFRTPVSGTLEAIMDTVDLTKFSSLLEHRRGVTATARTPDGRHALAAEMGLRDVSPCRHPGVPYAYAASLGVVSEAGRPSTKTSLKYTFTEDERDDPFVPGMGSYMQASLEAAG 670
A +L G+F+SV + +D DG+ ++TDV +TVKE L +G ++G +G +N + +L NPLGH E +++ G +G S + P P T A + +FSS E RG T + +G H LA +G RD+ P R+ +P YAAS +++EA PSTK+S+KYTF +D+R+D +P G ++ S E AG
Sbjct: 56 AVELRAFGIFDSVDIFVDKSADGAHNETDVIITVKESRMLSLYAGVESSG-VEGT------ANTKLTLT----NPLGHAEQVELSAAHGQYGSDGQNFSYRR--PKFLGRPWWFTATAANEVQVHERFSSFREKFRGGTVSISDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAV-PSTKSSVKYTFNDDQRNDSTLPTSGRLLRVSAEVAG 261 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig976.17755.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig976.17755.1 >prot_E_fasciculatus_S2_contig976.17755.1 ID=prot_E_fasciculatus_S2_contig976.17755.1|Name=mRNA_E_fasciculatus_S2_contig976.17755.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=218bp MGLFESVQVSMDAVDDGSLDQTDVTVTVKEKNWYLLQSGATTTGTAQGNLback to top mRNA from alignment at E_fasciculatus_S2_contig976:20..3208- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig976.17755.1 ID=mRNA_E_fasciculatus_S2_contig976.17755.1|Name=mRNA_E_fasciculatus_S2_contig976.17755.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3189bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig976:20..3208- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig976:20..3208- >mRNA_E_fasciculatus_S2_contig976.17755.1 ID=mRNA_E_fasciculatus_S2_contig976.17755.1|Name=mRNA_E_fasciculatus_S2_contig976.17755.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=654bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig976:20..3208- (Ectocarpus fasciculatus EfasUO2)back to top |